RNA–Protein interactions for RNA: ENST00000557135.5

WARS-238, Transcript of tryptophanyl-tRNA synthetase, human

APPRIS P1 TSL 1 (best) BASIC

Gene WARS, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
WARS-238	ENST00000557135	VAMP4	O75379	141 aa		12.76	□□□□□ -0.37
WARS-238	ENST00000557135	C8orf58	Q8NAV2	365 aa		12.76	□□□□□ -0.37
WARS-238	ENST00000557135	ZKSCAN2	Q63HK3	967 aa		12.76	□□□□□ -0.37
WARS-238	ENST00000557135	RTF1	Q92541	710 aa	Known RBP	12.76	□□□□□ -0.37
WARS-238	ENST00000557135	CHL1	O00533	1208 aa		12.75	□□□□□ -0.37
WARS-238	ENST00000557135	MIS18A	Q9NYP9	233 aa		12.75	□□□□□ -0.37
WARS-238	ENST00000557135	NOB1	Q9ULX3	412 aa	Known RBP	12.75	□□□□□ -0.37
WARS-238	ENST00000557135	RGPD5	Q99666	1765 aa		12.75	□□□□□ -0.37
WARS-238	ENST00000557135	TCERG1	O14776	1098 aa	Known RBP	12.74	□□□□□ -0.37
WARS-238	ENST00000557135	KRT24	Q2M2I5	525 aa		12.74	□□□□□ -0.37
WARS-238	ENST00000557135	TWISTNB	Q3B726	338 aa	Predicted RBP	12.74	□□□□□ -0.37
WARS-238	ENST00000557135	SOS2	Q07890	1332 aa	Predicted RBP	12.74	□□□□□ -0.37
WARS-238	ENST00000557135	GNAT3	A8MTJ3	354 aa		12.74	□□□□□ -0.37
WARS-238	ENST00000557135	CHRNA2	Q15822	529 aa		12.74	□□□□□ -0.37
WARS-238	ENST00000557135	ALDH1L2	Q3SY69	923 aa		12.74	□□□□□ -0.37
WARS-238	ENST00000557135	CRYBG1	Q9Y4K1	1723 aa		12.73	□□□□□ -0.37
WARS-238	ENST00000557135	MAP3K5	Q99683	1374 aa		12.73	□□□□□ -0.37
WARS-238	ENST00000557135	TRIM27	P14373	513 aa		12.73	□□□□□ -0.37
WARS-238	ENST00000557135	NCAPD2	Q15021	1401 aa		12.73	□□□□□ -0.37
WARS-238	ENST00000557135	DZIP1L	Q8IYY4	767 aa	Known RBP	12.73	□□□□□ -0.37
WARS-238	ENST00000557135	ERBB3	P21860	1342 aa		12.72	□□□□□ -0.37
WARS-238	ENST00000557135	HTATSF1	O43719	755 aa	Known RBP	12.72	□□□□□ -0.37
WARS-238	ENST00000557135	ATF7IP	Q6VMQ6	1270 aa		12.72	□□□□□ -0.37
WARS-238	ENST00000557135	MRPL50	Q8N5N7	158 aa	Known RBP	12.72	□□□□□ -0.37
WARS-238	ENST00000557135	IL17RE	Q8NFR9	667 aa		12.72	□□□□□ -0.37
WARS-238	ENST00000557135	KIAA0232	Q92628	1395 aa		12.72	□□□□□ -0.37
WARS-238	ENST00000557135	COL18A1	P39060	1754 aa		12.72	□□□□□ -0.37
WARS-238	ENST00000557135	LRRC37A3	O60309	1634 aa		12.71	□□□□□ -0.37
WARS-238	ENST00000557135	FTSJ3	Q8IY81	847 aa	Known RBP	12.71	□□□□□ -0.37
WARS-238	ENST00000557135	ZNF428	Q96B54	188 aa		12.71	□□□□□ -0.37
WARS-238	ENST00000557135	TSPYL4	Q9UJ04	414 aa		12.71	□□□□□ -0.37
WARS-238	ENST00000557135	CAMTA1	Q9Y6Y1	1673 aa		12.71	□□□□□ -0.37
WARS-238	ENST00000557135	KIF16B	Q96L93	1317 aa		12.71	□□□□□ -0.37
WARS-238	ENST00000557135	KDM2B	Q8NHM5	1336 aa		12.71	□□□□□ -0.38
WARS-238	ENST00000557135	MVP	Q14764	893 aa	Known RBP	12.7	□□□□□ -0.38
WARS-238	ENST00000557135	PLEKHO1	Q53GL0	409 aa	Predicted RBP	12.69	□□□□□ -0.38
WARS-238	ENST00000557135	ZNF530	Q6P9A1	599 aa	Predicted RBP	12.69	□□□□□ -0.38
WARS-238	ENST00000557135	SKAP1	Q86WV1	359 aa		12.69	□□□□□ -0.38
WARS-238	ENST00000557135	NLRP2	Q9NX02	1062 aa		12.69	□□□□□ -0.38
WARS-238	ENST00000557135	LMO7	Q8WWI1	1683 aa		12.69	□□□□□ -0.38
WARS-238	ENST00000557135	CPD	O75976	1380 aa		12.69	□□□□□ -0.38
WARS-238	ENST00000557135	IPO8	O15397	1037 aa	Known RBP	12.69	□□□□□ -0.38
WARS-238	ENST00000557135	BRPF1	P55201	1214 aa	Predicted RBP	12.69	□□□□□ -0.38
WARS-238	ENST00000557135	LGR6	Q9HBX8	967 aa		12.69	□□□□□ -0.38
WARS-238	ENST00000557135	NHSL1	Q5SYE7	1610 aa		12.68	□□□□□ -0.38
WARS-238	ENST00000557135	CSB-PGBD3	P0DP91	1061 aa		12.68	□□□□□ -0.38
WARS-238	ENST00000557135	MS4A1	P11836	297 aa		12.68	□□□□□ -0.38
WARS-238	ENST00000557135	TMEM57	Q8N5G2	664 aa		12.68	□□□□□ -0.38
WARS-238	ENST00000557135	CENPQ	Q7L2Z9	268 aa	Predicted RBP	12.68	□□□□□ -0.38
WARS-238	ENST00000557135	IGHD	P01880	384 aa		12.67	□□□□□ -0.38
WARS-238	ENST00000557135	AMOT	Q4VCS5	1084 aa		12.67	□□□□□ -0.38
WARS-238	ENST00000557135	AKAP4	Q5JQC9	854 aa		12.67	□□□□□ -0.38
WARS-238	ENST00000557135	ITPRIP	Q8IWB1	547 aa		12.67	□□□□□ -0.38
WARS-238	ENST00000557135	LTBP4	Q8N2S1	1624 aa		12.67	□□□□□ -0.38
WARS-238	ENST00000557135	HAP1	P54257	671 aa	Predicted RBP	12.66	□□□□□ -0.38
WARS-238	ENST00000557135	TAF7	Q15545	349 aa	Predicted RBP	12.66	□□□□□ -0.38
WARS-238	ENST00000557135	MPRIP	Q6WCQ1	1025 aa		12.66	□□□□□ -0.38
WARS-238	ENST00000557135	PRDM11	Q9NQV5	511 aa		12.66	□□□□□ -0.38
WARS-238	ENST00000557135	PCDHB15	Q9Y5E8	787 aa		12.66	□□□□□ -0.38
WARS-238	ENST00000557135	ABCC6	O95255	1503 aa		12.66	□□□□□ -0.38
WARS-238	ENST00000557135	FAM208A	Q9UK61	1670 aa	Known RBP	12.66	□□□□□ -0.38
WARS-238	ENST00000557135	CEMIP	Q8WUJ3	1361 aa		12.66	□□□□□ -0.38
WARS-238	ENST00000557135	ABCA3	Q99758	1704 aa		12.65	□□□□□ -0.38
WARS-238	ENST00000557135	C1orf141	Q5JVX7	400 aa		12.65	□□□□□ -0.38
WARS-238	ENST00000557135	MEGF6	O75095	1541 aa		12.65	□□□□□ -0.38
WARS-238	ENST00000557135	RAPGEF4	Q8WZA2	1011 aa		12.65	□□□□□ -0.39
WARS-238	ENST00000557135	ARHGAP45	Q92619	1136 aa		12.65	□□□□□ -0.39
WARS-238	ENST00000557135	DDX19B	Q9UMR2	479 aa		12.64	□□□□□ -0.39
WARS-238	ENST00000557135	RNMT	O43148	476 aa	Known RBP	12.63	□□□□□ -0.39
WARS-238	ENST00000557135	TAT	P17735	454 aa	Predicted RBP	12.63	□□□□□ -0.39
WARS-238	ENST00000557135	AAMP	Q13685	434 aa		12.63	□□□□□ -0.39
WARS-238	ENST00000557135	ROBO1	Q9Y6N7	1651 aa		12.63	□□□□□ -0.39
WARS-238	ENST00000557135	ABCC4	O15439	1325 aa		12.63	□□□□□ -0.39
WARS-238	ENST00000557135	AEBP2	Q6ZN18	517 aa	Predicted RBP	12.63	□□□□□ -0.39
WARS-238	ENST00000557135	BABAM1	Q9NWV8	329 aa		12.63	□□□□□ -0.39
WARS-238	ENST00000557135	RBM19	Q9Y4C8	960 aa	Known RBP	12.63	□□□□□ -0.39
WARS-238	ENST00000557135	KCNQ3	O43525	872 aa		12.62	□□□□□ -0.39
WARS-238	ENST00000557135	TEF	Q10587	303 aa		12.62	□□□□□ -0.39
WARS-238	ENST00000557135	API5	Q9BZZ5	524 aa	Known RBP	12.62	□□□□□ -0.39
WARS-238	ENST00000557135	NECTIN2	Q92692	538 aa		12.61	□□□□□ -0.39
WARS-238	ENST00000557135	COL5A2	P05997	1499 aa	Predicted RBP	12.61	□□□□□ -0.39
WARS-238	ENST00000557135	SLC4A2	P04920	1241 aa		12.61	□□□□□ -0.39
WARS-238	ENST00000557135	G2E3	Q7L622	706 aa		12.61	□□□□□ -0.39
WARS-238	ENST00000557135	RGS12	O14924	1447 aa		12.61	□□□□□ -0.39
WARS-238	ENST00000557135	WDR17	Q8IZU2	1322 aa		12.61	□□□□□ -0.39
WARS-238	ENST00000557135	ZBTB40	Q9NUA8	1239 aa		12.6	□□□□□ -0.39
WARS-238	ENST00000557135	BTBD11	A6QL63	1104 aa		12.6	□□□□□ -0.39
WARS-238	ENST00000557135	TOM1L2	Q6ZVM7	507 aa		12.6	□□□□□ -0.39
WARS-238	ENST00000557135	STRN4	Q9NRL3	753 aa		12.6	□□□□□ -0.39
WARS-238	ENST00000557135	SPG7	Q9UQ90	795 aa		12.6	□□□□□ -0.39
WARS-238	ENST00000557135	KDM3B	Q7LBC6	1761 aa		12.59	□□□□□ -0.39
WARS-238	ENST00000557135	VIRMA	Q69YN4	1812 aa	Known RBP	12.59	□□□□□ -0.39
WARS-238	ENST00000557135	PHKG2	P15735	406 aa		12.59	□□□□□ -0.39
WARS-238	ENST00000557135	EIF4A1	P60842	406 aa	Known RBP	12.59	□□□□□ -0.39
WARS-238	ENST00000557135	OVOS2	A0A0G2JMS6	1433 aa		12.59	□□□□□ -0.39
WARS-238	ENST00000557135	AHDC1	Q5TGY3	1603 aa	Predicted RBP	12.59	□□□□□ -0.39
WARS-238	ENST00000557135	KDM6A	O15550	1401 aa	Predicted RBP	12.58	□□□□□ -0.39
WARS-238	ENST00000557135	ZBTB7B	O15156	539 aa	Predicted RBP	12.58	□□□□□ -0.39
WARS-238	ENST00000557135	CYP27B1	O15528	508 aa		12.58	□□□□□ -0.4
WARS-238	ENST00000557135	CCDC30	Q5VVM6	783 aa		12.58	□□□□□ -0.4

Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms