RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 YBX3P16989 372 aaKnown RBP eCLIP8.73□□□□□ -1.01
ATXN3-245ENST00000556958 ZNF467Q7Z7K2 595 aaPredicted RBP8.73□□□□□ -1.01
ATXN3-245ENST00000556958 KLRG1Q96E93 195 aa8.73□□□□□ -1.01
ATXN3-245ENST00000556958 COL14A1Q05707 1796 aaKnown RBP8.73□□□□□ -1.01
ATXN3-245ENST00000556958 SSH2Q76I76 1423 aa8.72□□□□□ -1.01
ATXN3-245ENST00000556958 CROCC2H7BZ55 1655 aa8.72□□□□□ -1.01
ATXN3-245ENST00000556958 KIF1AQ12756 1690 aa8.72□□□□□ -1.01
ATXN3-245ENST00000556958 DOK7Q18PE1 504 aa8.72□□□□□ -1.01
ATXN3-245ENST00000556958 PTF1AQ7RTS3 328 aa8.72□□□□□ -1.01
ATXN3-245ENST00000556958 NLGN2Q8NFZ4 835 aa8.72□□□□□ -1.01
ATXN3-245ENST00000556958 CDCA7Q9BWT1 371 aaPredicted RBP8.72□□□□□ -1.01
ATXN3-245ENST00000556958 ROCK1Q13464 1354 aa8.72□□□□□ -1.01
ATXN3-245ENST00000556958 MYOM1P52179 1685 aa8.72□□□□□ -1.01
ATXN3-245ENST00000556958 IFNLR1Q8IU57 520 aaPredicted RBP8.71□□□□□ -1.02
ATXN3-245ENST00000556958 ZNF687Q8N1G0 1237 aa8.71□□□□□ -1.02
ATXN3-245ENST00000556958 POGKQ9P215 609 aa8.71□□□□□ -1.02
ATXN3-245ENST00000556958 BOLA1Q9Y3E2 137 aa8.71□□□□□ -1.02
ATXN3-245ENST00000556958 E9PCH4 1651 aa8.71□□□□□ -1.02
ATXN3-245ENST00000556958 ANKRD30BQ9BXX2 1392 aa8.71□□□□□ -1.02
ATXN3-245ENST00000556958 CHD4Q14839 1912 aa8.7□□□□□ -1.02
ATXN3-245ENST00000556958 SAFB2Q14151 953 aaKnown RBP eCLIP8.7□□□□□ -1.02
ATXN3-245ENST00000556958 ADGRF5Q8IZF2 1346 aa8.7□□□□□ -1.02
ATXN3-245ENST00000556958 ANKARQ7Z5J8 1434 aa8.7□□□□□ -1.02
ATXN3-245ENST00000556958 NRAPQ86VF7 1730 aa8.69□□□□□ -1.02
ATXN3-245ENST00000556958 MARCH10Q8NA82 808 aaPredicted RBP8.69□□□□□ -1.02
ATXN3-245ENST00000556958 PRAM1Q96QH2 718 aa8.69□□□□□ -1.02
ATXN3-245ENST00000556958 EIF3AQ14152 1382 aaKnown RBP8.69□□□□□ -1.02
ATXN3-245ENST00000556958 BCL9O00512 1426 aa8.69□□□□□ -1.02
ATXN3-245ENST00000556958 SHANK3Q9BYB0 1731 aa8.68□□□□□ -1.02
ATXN3-245ENST00000556958 EXOC5O00471 708 aa8.68□□□□□ -1.02
ATXN3-245ENST00000556958 PSEN1P49768 467 aa8.68□□□□□ -1.02
ATXN3-245ENST00000556958 CASZ1Q86V15 1759 aa8.68□□□□□ -1.02
ATXN3-245ENST00000556958 ADCY9O60503 1353 aa8.67□□□□□ -1.02
ATXN3-245ENST00000556958 NUTM2GQ5VZR2 741 aa8.67□□□□□ -1.02
ATXN3-245ENST00000556958 TOM1L2Q6ZVM7 507 aa8.67□□□□□ -1.02
ATXN3-245ENST00000556958 YTHDC2Q9H6S0 1430 aaKnown RBP8.67□□□□□ -1.02
ATXN3-245ENST00000556958 TFCP2L1Q9NZI6 479 aa8.67□□□□□ -1.02
ATXN3-245ENST00000556958 CPDO75976 1380 aa8.66□□□□□ -1.02
ATXN3-245ENST00000556958 RGL3Q3MIN7 710 aa8.66□□□□□ -1.02
ATXN3-245ENST00000556958 C16orf71Q8IYS4 520 aaPredicted RBP8.66□□□□□ -1.02
ATXN3-245ENST00000556958 RBM46Q8TBY0 533 aaKnown RBP8.66□□□□□ -1.02
ATXN3-245ENST00000556958 CD2APQ9Y5K6 639 aa8.66□□□□□ -1.02
ATXN3-245ENST00000556958 CRB1P82279 1406 aa8.65□□□□□ -1.02
ATXN3-245ENST00000556958 G3V3G9 751 aa8.65□□□□□ -1.02
ATXN3-245ENST00000556958 FSTL1Q12841 308 aa8.65□□□□□ -1.02
ATXN3-245ENST00000556958 ZNF827Q17R98 1081 aa8.65□□□□□ -1.02
ATXN3-245ENST00000556958 NLRP13Q86W25 1043 aa8.65□□□□□ -1.02
ATXN3-245ENST00000556958 ABTB2Q8N961 1025 aa8.65□□□□□ -1.02
ATXN3-245ENST00000556958 C14orf93Q9H972 538 aaKnown RBP8.65□□□□□ -1.02
ATXN3-245ENST00000556958 ATP7BP35670 1465 aa8.64□□□□□ -1.03
ATXN3-245ENST00000556958 WASLO00401 505 aaPredicted RBP8.64□□□□□ -1.03
ATXN3-245ENST00000556958 RIMBP2O15034 1052 aa8.64□□□□□ -1.03
ATXN3-245ENST00000556958 GCP02774 474 aa8.64□□□□□ -1.03
ATXN3-245ENST00000556958 SLC27A3Q5K4L6 730 aa8.64□□□□□ -1.03
ATXN3-245ENST00000556958 HIRIP3Q9BW71 556 aaPredicted RBP8.64□□□□□ -1.03
ATXN3-245ENST00000556958 HSPA1AP0DMV8 641 aaKnown RBP8.63□□□□□ -1.03
ATXN3-245ENST00000556958 HSPA1BP0DMV9 641 aaKnown RBP8.63□□□□□ -1.03
ATXN3-245ENST00000556958 ITGAEP38570 1179 aa8.63□□□□□ -1.03
ATXN3-245ENST00000556958 GOLGB1Q14789 3259 aaKnown RBP8.63□□□□□ -1.03
ATXN3-245ENST00000556958 FMN2Q9NZ56 1722 aa8.63□□□□□ -1.03
ATXN3-245ENST00000556958 PRR36Q9H6K5 1346 aa8.62□□□□□ -1.03
ATXN3-245ENST00000556958 HTRA3P83110 453 aa8.62□□□□□ -1.03
ATXN3-245ENST00000556958 BRD4O60885 1362 aaPredicted RBP8.61□□□□□ -1.03
ATXN3-245ENST00000556958 PNPLA7Q6ZV29 1317 aa8.61□□□□□ -1.03
ATXN3-245ENST00000556958 ZBTB7CA1YPR0 619 aa8.61□□□□□ -1.03
ATXN3-245ENST00000556958 CHRM1P11229 460 aaPredicted RBP8.61□□□□□ -1.03
ATXN3-245ENST00000556958 HMGB2P26583 209 aaKnown RBP8.61□□□□□ -1.03
ATXN3-245ENST00000556958 ACSBG1Q96GR2 724 aa8.61□□□□□ -1.03
ATXN3-245ENST00000556958 LRRC4BQ9NT99 713 aa8.61□□□□□ -1.03
ATXN3-245ENST00000556958 MINK1Q8N4C8 1332 aaPredicted RBP8.6□□□□□ -1.03
ATXN3-245ENST00000556958 CFAP70Q5T0N1 1121 aa8.6□□□□□ -1.03
ATXN3-245ENST00000556958 GPR153Q6NV75 609 aa8.6□□□□□ -1.03
ATXN3-245ENST00000556958 ANKRD13DQ6ZTN6 518 aa8.6□□□□□ -1.03
ATXN3-245ENST00000556958 NUDT16Q96DE0 195 aaKnown RBP8.6□□□□□ -1.03
ATXN3-245ENST00000556958 CARD10Q9BWT7 1032 aa8.6□□□□□ -1.03
ATXN3-245ENST00000556958 ZSWIM6Q9HCJ5 1215 aa8.6□□□□□ -1.03
ATXN3-245ENST00000556958 CABP2Q9NPB3 220 aa8.6□□□□□ -1.03
ATXN3-245ENST00000556958 CLTCL1P53675 1640 aa8.6□□□□□ -1.03
ATXN3-245ENST00000556958 RGPD3A6NKT7 1758 aaPredicted RBP8.6□□□□□ -1.03
ATXN3-245ENST00000556958 RGPD4Q7Z3J3 1758 aa8.6□□□□□ -1.03
ATXN3-245ENST00000556958 ABCA3Q99758 1704 aa8.6□□□□□ -1.03
ATXN3-245ENST00000556958 WDR17Q8IZU2 1322 aa8.59□□□□□ -1.03
ATXN3-245ENST00000556958 CSB-PGBD3P0DP91 1061 aa8.59□□□□□ -1.03
ATXN3-245ENST00000556958 GSE1Q14687 1217 aa8.59□□□□□ -1.03
ATXN3-245ENST00000556958 SPOCK2Q92563 424 aa8.59□□□□□ -1.03
ATXN3-245ENST00000556958 PLA2G2EQ9NZK7 142 aa8.59□□□□□ -1.03
ATXN3-245ENST00000556958 COL5A2P05997 1499 aaPredicted RBP8.58□□□□□ -1.04
ATXN3-245ENST00000556958 USP19O94966 1318 aa8.58□□□□□ -1.04
ATXN3-245ENST00000556958 FAM161AQ3B820 660 aa8.58□□□□□ -1.04
ATXN3-245ENST00000556958 NMRK2Q9NPI5 230 aa8.58□□□□□ -1.04
ATXN3-245ENST00000556958 USP6P35125 1406 aa8.57□□□□□ -1.04
ATXN3-245ENST00000556958 PDAP1Q13442 181 aaKnown RBP8.57□□□□□ -1.04
ATXN3-245ENST00000556958 TMEM92Q6UXU6 159 aa8.57□□□□□ -1.04
ATXN3-245ENST00000556958 FLAD1Q8NFF5 587 aa8.57□□□□□ -1.04
ATXN3-245ENST00000556958 TRAK1Q9UPV9 953 aa8.57□□□□□ -1.04
ATXN3-245ENST00000556958 ACEP12821 1306 aa8.56□□□□□ -1.04
ATXN3-245ENST00000556958 PIK3C2GO75747 1445 aa8.56□□□□□ -1.04
ATXN3-245ENST00000556958 PLEKHG3A1L390 1219 aa8.56□□□□□ -1.04
ATXN3-245ENST00000556958 MLLT1Q03111 559 aaPredicted RBP8.56□□□□□ -1.04
ATXN3-245ENST00000556958 SMC1BQ8NDV3 1235 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms