RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 FOXD4L5Q5VV16 416 aaPredicted RBP10.48□□□□□ -0.73
HIF1A-209ENST00000556827 CCDC155Q8N6L0 562 aa10.48□□□□□ -0.73
HIF1A-209ENST00000556827 SCTRP47872 440 aa10.47□□□□□ -0.73
HIF1A-209ENST00000556827 IRF5Q13568 498 aa10.47□□□□□ -0.73
HIF1A-209ENST00000556827 MCM6Q14566 821 aa10.47□□□□□ -0.73
HIF1A-209ENST00000556827 CYP2U1Q7Z449 544 aa10.47□□□□□ -0.73
HIF1A-209ENST00000556827 LYSMD3Q7Z3D4 306 aa10.46□□□□□ -0.73
HIF1A-209ENST00000556827 CEP126Q9P2H0 1117 aa10.46□□□□□ -0.73
HIF1A-209ENST00000556827 VAC14Q08AM6 782 aa10.45□□□□□ -0.74
HIF1A-209ENST00000556827 A0A1W2PRU2 124 aa10.44□□□□□ -0.74
HIF1A-209ENST00000556827 SLC35F4A4IF30 521 aa10.44□□□□□ -0.74
HIF1A-209ENST00000556827 MYCP01106 439 aaPredicted RBP10.44□□□□□ -0.74
HIF1A-209ENST00000556827 ZSCAN1Q8NBB4 408 aa10.44□□□□□ -0.74
HIF1A-209ENST00000556827 NLRP3Q96P20 1036 aa10.44□□□□□ -0.74
HIF1A-209ENST00000556827 SLFNL1Q499Z3 407 aa10.43□□□□□ -0.74
HIF1A-209ENST00000556827 PRICKLE2Q7Z3G6 844 aa10.43□□□□□ -0.74
HIF1A-209ENST00000556827 CDC14CA4D256 554 aa10.42□□□□□ -0.74
HIF1A-209ENST00000556827 FAM181BA6NEQ2 426 aa10.42□□□□□ -0.74
HIF1A-209ENST00000556827 ITGA6P23229 1130 aa10.42□□□□□ -0.74
HIF1A-209ENST00000556827 RNF144AP50876 292 aaPredicted RBP10.42□□□□□ -0.74
HIF1A-209ENST00000556827 CCDC85AQ96PX6 553 aaPredicted RBP10.42□□□□□ -0.74
HIF1A-209ENST00000556827 OSBPL3Q9H4L5 887 aa10.42□□□□□ -0.74
HIF1A-209ENST00000556827 ARHGEF10LQ9HCE6 1279 aa10.42□□□□□ -0.74
HIF1A-209ENST00000556827 RHOQP17081 205 aa10.41□□□□□ -0.74
HIF1A-209ENST00000556827 WASHC4Q2M389 1173 aa10.41□□□□□ -0.74
HIF1A-209ENST00000556827 SLC27A3Q5K4L6 730 aa10.41□□□□□ -0.74
HIF1A-209ENST00000556827 RNF135Q8IUD6 432 aa10.41□□□□□ -0.74
HIF1A-209ENST00000556827 DOLKQ9UPQ8 538 aa10.41□□□□□ -0.74
HIF1A-209ENST00000556827 SENP3-EIF4A1A0A087X0R7 540 aa10.4□□□□□ -0.74
HIF1A-209ENST00000556827 TRAK2O60296 914 aa10.4□□□□□ -0.74
HIF1A-209ENST00000556827 GPC1P35052 558 aa10.4□□□□□ -0.74
HIF1A-209ENST00000556827 CLN3Q13286 438 aa10.4□□□□□ -0.74
HIF1A-209ENST00000556827 CDCA7Q9BWT1 371 aaPredicted RBP10.4□□□□□ -0.74
HIF1A-209ENST00000556827 RAB6BQ9NRW1 208 aa10.39□□□□□ -0.75
HIF1A-209ENST00000556827 VWA5B2Q8N398 1253 aa10.38□□□□□ -0.75
HIF1A-209ENST00000556827 GPR161Q8N6U8 529 aaKnown RBP10.38□□□□□ -0.75
HIF1A-209ENST00000556827 NANOS1Q8WY41 292 aaKnown RBP10.38□□□□□ -0.75
HIF1A-209ENST00000556827 SEMA3FQ13275 785 aa10.37□□□□□ -0.75
HIF1A-209ENST00000556827 OXLD1Q5BKU9 147 aa10.37□□□□□ -0.75
HIF1A-209ENST00000556827 SV2AQ7L0J3 742 aa10.37□□□□□ -0.75
HIF1A-209ENST00000556827 COG6Q9Y2V7 657 aa10.37□□□□□ -0.75
HIF1A-209ENST00000556827 GNRH1P01148 92 aa10.36□□□□□ -0.75
HIF1A-209ENST00000556827 COL25A1Q9BXS0 654 aaPredicted RBP10.36□□□□□ -0.75
HIF1A-209ENST00000556827 LORP23490 312 aaPredicted RBP10.35□□□□□ -0.75
HIF1A-209ENST00000556827 WWC1Q8IX03 1113 aa10.35□□□□□ -0.75
HIF1A-209ENST00000556827 CNTNAP3BQ96NU0 1288 aa10.35□□□□□ -0.75
HIF1A-209ENST00000556827 CNTNAP3Q9BZ76 1288 aa10.35□□□□□ -0.75
HIF1A-209ENST00000556827 RAD21O60216 631 aa10.34□□□□□ -0.75
HIF1A-209ENST00000556827 SOX11P35716 441 aa10.34□□□□□ -0.75
HIF1A-209ENST00000556827 POU4F2Q12837 409 aa10.34□□□□□ -0.75
HIF1A-209ENST00000556827 USP4Q13107 963 aa10.34□□□□□ -0.75
HIF1A-209ENST00000556827 TSGA10IPQ3SY00 556 aa10.34□□□□□ -0.75
HIF1A-209ENST00000556827 PHTF2Q8N3S3 785 aa10.34□□□□□ -0.75
HIF1A-209ENST00000556827 CNKSR1Q969H4 720 aa10.34□□□□□ -0.75
HIF1A-209ENST00000556827 KRT76Q01546 638 aa10.33□□□□□ -0.76
HIF1A-209ENST00000556827 RIPOR1Q6ZS17 1223 aa10.33□□□□□ -0.76
HIF1A-209ENST00000556827 GRIP2Q9C0E4 1043 aa10.33□□□□□ -0.76
HIF1A-209ENST00000556827 IL2RAP01589 272 aa10.32□□□□□ -0.76
HIF1A-209ENST00000556827 FLIIQ13045 1269 aa10.32□□□□□ -0.76
HIF1A-209ENST00000556827 NBPF10Q6P3W6 841 aaKnown RBP10.32□□□□□ -0.76
HIF1A-209ENST00000556827 NBPF15Q8N660 670 aa10.32□□□□□ -0.76
HIF1A-209ENST00000556827 SIRT1Q96EB6 747 aa10.32□□□□□ -0.76
HIF1A-209ENST00000556827 ESYT1Q9BSJ8 1104 aa10.32□□□□□ -0.76
HIF1A-209ENST00000556827 UBTFP17480 764 aaKnown RBP10.31□□□□□ -0.76
HIF1A-209ENST00000556827 GTF2E1P29083 439 aaPredicted RBP10.31□□□□□ -0.76
HIF1A-209ENST00000556827 ESCO1Q5FWF5 840 aa10.31□□□□□ -0.76
HIF1A-209ENST00000556827 RNFT1Q5M7Z0 435 aa10.31□□□□□ -0.76
HIF1A-209ENST00000556827 POM121Q96HA1 1249 aa10.31□□□□□ -0.76
HIF1A-209ENST00000556827 GAS2L1Q99501 681 aaPredicted RBP10.31□□□□□ -0.76
HIF1A-209ENST00000556827 CUEDC1Q9NWM3 386 aaPredicted RBP10.31□□□□□ -0.76
HIF1A-209ENST00000556827 DYRK1BQ9Y463 629 aa10.31□□□□□ -0.76
HIF1A-209ENST00000556827 ABCC9O60706 1549 aa10.31□□□□□ -0.76
HIF1A-209ENST00000556827 WASLO00401 505 aaPredicted RBP10.3□□□□□ -0.76
HIF1A-209ENST00000556827 CENPCQ03188 943 aa10.3□□□□□ -0.76
HIF1A-209ENST00000556827 TAS1R3Q7RTX0 852 aa10.3□□□□□ -0.76
HIF1A-209ENST00000556827 PLPP7Q8NBV4 271 aa10.3□□□□□ -0.76
HIF1A-209ENST00000556827 SPATA31C2B4DYI2 1134 aa10.29□□□□□ -0.76
HIF1A-209ENST00000556827 MAP7D1Q3KQU3 841 aa10.29□□□□□ -0.76
HIF1A-209ENST00000556827 ZSCAN10Q96SZ4 725 aaPredicted RBP10.29□□□□□ -0.76
HIF1A-209ENST00000556827 TIMMDC1Q9NPL8 285 aa10.29□□□□□ -0.76
HIF1A-209ENST00000556827 CHIC2Q9UKJ5 165 aa10.29□□□□□ -0.76
HIF1A-209ENST00000556827 GNASQ5JWF2 1037 aa10.28□□□□□ -0.76
HIF1A-209ENST00000556827 TMEM214Q6NUQ4 689 aaKnown RBP10.28□□□□□ -0.76
HIF1A-209ENST00000556827 TRIM22Q8IYM9 498 aa10.28□□□□□ -0.76
HIF1A-209ENST00000556827 CLUAP1Q96AJ1 413 aa10.28□□□□□ -0.76
HIF1A-209ENST00000556827 ZNF837Q96EG3 531 aaPredicted RBP10.28□□□□□ -0.76
HIF1A-209ENST00000556827 STAU1O95793 577 aaKnown RBP10.27□□□□□ -0.77
HIF1A-209ENST00000556827 WDR44Q5JSH3 913 aa10.27□□□□□ -0.77
HIF1A-209ENST00000556827 FOXR1Q6PIV2 292 aa10.27□□□□□ -0.77
HIF1A-209ENST00000556827 XAGE2Q96GT9 111 aa10.27□□□□□ -0.77
HIF1A-209ENST00000556827 H7C1W4 665 aa10.26□□□□□ -0.77
HIF1A-209ENST00000556827 TLR1Q15399 786 aa10.26□□□□□ -0.77
HIF1A-209ENST00000556827 GMCL1Q96IK5 515 aa10.26□□□□□ -0.77
HIF1A-209ENST00000556827 ETNK1Q9HBU6 452 aa10.26□□□□□ -0.77
HIF1A-209ENST00000556827 PIK3CDO00329 1044 aa10.25□□□□□ -0.77
HIF1A-209ENST00000556827 PHKA2P46019 1235 aa10.25□□□□□ -0.77
HIF1A-209ENST00000556827 C14orf37Q86TY3 774 aa10.25□□□□□ -0.77
HIF1A-209ENST00000556827 TIMELESSQ9UNS1 1208 aa10.25□□□□□ -0.77
HIF1A-209ENST00000556827 DBN1Q16643 649 aa10.24□□□□□ -0.77
HIF1A-209ENST00000556827 FHDC1Q9C0D6 1143 aaPredicted RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms