RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 POLMQ9NP87 494 aaPredicted RBP8.46□□□□□ -1.06
ATXN3-243ENST00000556671 ZNF330Q9Y3S2 320 aaPredicted RBP8.46□□□□□ -1.06
ATXN3-243ENST00000556671 BAZ1AQ9NRL2 1556 aaPredicted RBP8.46□□□□□ -1.06
ATXN3-243ENST00000556671 SLC35F4A4IF30 521 aa8.45□□□□□ -1.06
ATXN3-243ENST00000556671 RNF20Q5VTR2 975 aa8.45□□□□□ -1.06
ATXN3-243ENST00000556671 FOXD4L5Q5VV16 416 aaPredicted RBP8.45□□□□□ -1.06
ATXN3-243ENST00000556671 CCDC155Q8N6L0 562 aa8.45□□□□□ -1.06
ATXN3-243ENST00000556671 MROH2BQ7Z745 1585 aa8.44□□□□□ -1.06
ATXN3-243ENST00000556671 ERVK-9P63128 1117 aa8.43□□□□□ -1.06
ATXN3-243ENST00000556671 NANOS1Q8WY41 292 aaKnown RBP8.43□□□□□ -1.06
ATXN3-243ENST00000556671 WIZO95785 1651 aa8.43□□□□□ -1.06
ATXN3-243ENST00000556671 ATP5J2-PTCD1G3V325 749 aa8.42□□□□□ -1.06
ATXN3-243ENST00000556671 CC2D2BQ6DHV5 1058 aa8.42□□□□□ -1.06
ATXN3-243ENST00000556671 SMARCA2P51531 1590 aa8.42□□□□□ -1.06
ATXN3-243ENST00000556671 FAM181BA6NEQ2 426 aa8.41□□□□□ -1.06
ATXN3-243ENST00000556671 GPR161Q8N6U8 529 aaKnown RBP8.41□□□□□ -1.06
ATXN3-243ENST00000556671 TBC1D2BQ9UPU7 963 aa8.41□□□□□ -1.06
ATXN3-243ENST00000556671 ATAD2BQ9ULI0 1458 aa8.4□□□□□ -1.06
ATXN3-243ENST00000556671 SENP3-EIF4A1A0A087X0R7 540 aa8.4□□□□□ -1.06
ATXN3-243ENST00000556671 PRKCSHP14314 528 aaPredicted RBP8.4□□□□□ -1.06
ATXN3-243ENST00000556671 ITGA6P23229 1130 aa8.4□□□□□ -1.06
ATXN3-243ENST00000556671 RNF144AP50876 292 aaPredicted RBP8.4□□□□□ -1.06
ATXN3-243ENST00000556671 SCTRP47872 440 aa8.39□□□□□ -1.07
ATXN3-243ENST00000556671 LYSMD3Q7Z3D4 306 aa8.39□□□□□ -1.07
ATXN3-243ENST00000556671 PCDHB11Q9Y5F2 797 aa8.39□□□□□ -1.07
ATXN3-243ENST00000556671 BAZ1BQ9UIG0 1483 aaKnown RBP8.38□□□□□ -1.07
ATXN3-243ENST00000556671 GPC1P35052 558 aa8.38□□□□□ -1.07
ATXN3-243ENST00000556671 KRT76Q01546 638 aa8.38□□□□□ -1.07
ATXN3-243ENST00000556671 IRF5Q13568 498 aa8.38□□□□□ -1.07
ATXN3-243ENST00000556671 PRM3Q9NNZ6 103 aa8.38□□□□□ -1.07
ATXN3-243ENST00000556671 CEP126Q9P2H0 1117 aa8.38□□□□□ -1.07
ATXN3-243ENST00000556671 NCAPD3P42695 1498 aa8.38□□□□□ -1.07
ATXN3-243ENST00000556671 A0A1W2PRU2 124 aa8.37□□□□□ -1.07
ATXN3-243ENST00000556671 TRAK2O60296 914 aa8.37□□□□□ -1.07
ATXN3-243ENST00000556671 CYP2U1Q7Z449 544 aa8.37□□□□□ -1.07
ATXN3-243ENST00000556671 OSBPL3Q9H4L5 887 aa8.37□□□□□ -1.07
ATXN3-243ENST00000556671 MEN1O00255 615 aa8.35□□□□□ -1.07
ATXN3-243ENST00000556671 SV2AQ7L0J3 742 aa8.35□□□□□ -1.07
ATXN3-243ENST00000556671 PRICKLE2Q7Z3G6 844 aa8.35□□□□□ -1.07
ATXN3-243ENST00000556671 VWA5B2Q8N398 1253 aa8.35□□□□□ -1.07
ATXN3-243ENST00000556671 CNTNAP3BQ96NU0 1288 aa8.35□□□□□ -1.07
ATXN3-243ENST00000556671 CCDC85AQ96PX6 553 aaPredicted RBP8.35□□□□□ -1.07
ATXN3-243ENST00000556671 COL25A1Q9BXS0 654 aaPredicted RBP8.35□□□□□ -1.07
ATXN3-243ENST00000556671 CNTNAP3Q9BZ76 1288 aa8.35□□□□□ -1.07
ATXN3-243ENST00000556671 CDC14CA4D256 554 aa8.34□□□□□ -1.07
ATXN3-243ENST00000556671 EIF4G2P78344 907 aaKnown RBP eCLIP8.34□□□□□ -1.07
ATXN3-243ENST00000556671 CLN3Q13286 438 aa8.34□□□□□ -1.07
ATXN3-243ENST00000556671 SUPT5HO00267 1087 aaKnown RBP8.33□□□□□ -1.08
ATXN3-243ENST00000556671 RHOQP17081 205 aa8.33□□□□□ -1.08
ATXN3-243ENST00000556671 RNFT1Q5M7Z0 435 aa8.33□□□□□ -1.08
ATXN3-243ENST00000556671 CDCA7Q9BWT1 371 aaPredicted RBP8.33□□□□□ -1.08
ATXN3-243ENST00000556671 ARHGEF10LQ9HCE6 1279 aa8.33□□□□□ -1.08
ATXN3-243ENST00000556671 HMGXB3Q12766 1538 aa8.33□□□□□ -1.08
ATXN3-243ENST00000556671 PHTF2Q8N3S3 785 aa8.32□□□□□ -1.08
ATXN3-243ENST00000556671 NLRP3Q96P20 1036 aa8.32□□□□□ -1.08
ATXN3-243ENST00000556671 GRIP2Q9C0E4 1043 aa8.32□□□□□ -1.08
ATXN3-243ENST00000556671 ESF1Q9H501 851 aaKnown RBP8.32□□□□□ -1.08
ATXN3-243ENST00000556671 GDPD2Q9HCC8 539 aa8.32□□□□□ -1.08
ATXN3-243ENST00000556671 CUEDC1Q9NWM3 386 aaPredicted RBP8.32□□□□□ -1.08
ATXN3-243ENST00000556671 PEG3Q9GZU2 1588 aa8.31□□□□□ -1.08
ATXN3-243ENST00000556671 RSF1Q96T23 1441 aaPredicted RBP8.31□□□□□ -1.08
ATXN3-243ENST00000556671 GNRH1P01148 92 aa8.31□□□□□ -1.08
ATXN3-243ENST00000556671 VAC14Q08AM6 782 aa8.31□□□□□ -1.08
ATXN3-243ENST00000556671 MCM6Q14566 821 aa8.31□□□□□ -1.08
ATXN3-243ENST00000556671 SLC27A3Q5K4L6 730 aa8.31□□□□□ -1.08
ATXN3-243ENST00000556671 SPATA31C2B4DYI2 1134 aa8.3□□□□□ -1.08
ATXN3-243ENST00000556671 MYCP01106 439 aaPredicted RBP8.3□□□□□ -1.08
ATXN3-243ENST00000556671 ABL2P42684 1182 aa8.29□□□□□ -1.08
ATXN3-243ENST00000556671 POU4F2Q12837 409 aa8.29□□□□□ -1.08
ATXN3-243ENST00000556671 TSGA10IPQ3SY00 556 aa8.29□□□□□ -1.08
ATXN3-243ENST00000556671 ESYT1Q9BSJ8 1104 aa8.29□□□□□ -1.08
ATXN3-243ENST00000556671 RAB6BQ9NRW1 208 aa8.29□□□□□ -1.08
ATXN3-243ENST00000556671 CHIC2Q9UKJ5 165 aa8.29□□□□□ -1.08
ATXN3-243ENST00000556671 DYRK1BQ9Y463 629 aa8.29□□□□□ -1.08
ATXN3-243ENST00000556671 IL2RAP01589 272 aa8.28□□□□□ -1.08
ATXN3-243ENST00000556671 SLURP2P0DP57 97 aa8.28□□□□□ -1.08
ATXN3-243ENST00000556671 WASHC4Q2M389 1173 aa8.28□□□□□ -1.08
ATXN3-243ENST00000556671 SLFNL1Q499Z3 407 aa8.28□□□□□ -1.08
ATXN3-243ENST00000556671 NBPF10Q6P3W6 841 aaKnown RBP8.28□□□□□ -1.08
ATXN3-243ENST00000556671 NBPF15Q8N660 670 aa8.28□□□□□ -1.08
ATXN3-243ENST00000556671 CNKSR1Q969H4 720 aa8.28□□□□□ -1.08
ATXN3-243ENST00000556671 GMCL1Q96IK5 515 aa8.28□□□□□ -1.08
ATXN3-243ENST00000556671 DOLKQ9UPQ8 538 aa8.28□□□□□ -1.08
ATXN3-243ENST00000556671 HRH3Q9Y5N1 445 aa8.28□□□□□ -1.08
ATXN3-243ENST00000556671 NESP48681 1621 aa8.28□□□□□ -1.08
ATXN3-243ENST00000556671 ERCC6Q03468 1493 aa8.27□□□□□ -1.09
ATXN3-243ENST00000556671 USP4Q13107 963 aa8.27□□□□□ -1.09
ATXN3-243ENST00000556671 WDR44Q5JSH3 913 aa8.27□□□□□ -1.09
ATXN3-243ENST00000556671 RNF135Q8IUD6 432 aa8.27□□□□□ -1.09
ATXN3-243ENST00000556671 TRIM22Q8IYM9 498 aa8.27□□□□□ -1.09
ATXN3-243ENST00000556671 ZNF837Q96EG3 531 aaPredicted RBP8.27□□□□□ -1.09
ATXN3-243ENST00000556671 CENPCQ03188 943 aa8.26□□□□□ -1.09
ATXN3-243ENST00000556671 GAS6Q14393 721 aa8.26□□□□□ -1.09
ATXN3-243ENST00000556671 ZNF385CQ66K41 422 aaPredicted RBP8.26□□□□□ -1.09
ATXN3-243ENST00000556671 TAS1R3Q7RTX0 852 aa8.26□□□□□ -1.09
ATXN3-243ENST00000556671 XAGE2Q96GT9 111 aa8.26□□□□□ -1.09
ATXN3-243ENST00000556671 WASLO00401 505 aaPredicted RBP8.25□□□□□ -1.09
ATXN3-243ENST00000556671 DBN1Q16643 649 aa8.25□□□□□ -1.09
ATXN3-243ENST00000556671 COG6Q9Y2V7 657 aa8.25□□□□□ -1.09
ATXN3-243ENST00000556671 H7C1W4 665 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms