RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 BARGINQ6ZT62 677 aa23.18■■□□□ 1.3
TUBB3-211ENST00000556536 SEPT12Q8IYM1 358 aa23.18■■□□□ 1.3
TUBB3-211ENST00000556536 MEGF6O75095 1541 aa23.18■■□□□ 1.3
TUBB3-211ENST00000556536 DISP2A7MBM2 1401 aa23.17■■□□□ 1.3
TUBB3-211ENST00000556536 FCHSD2O94868 740 aa23.17■■□□□ 1.3
TUBB3-211ENST00000556536 IL2RBP14784 551 aa23.17■■□□□ 1.3
TUBB3-211ENST00000556536 PRKAR2BP31323 418 aa23.17■■□□□ 1.3
TUBB3-211ENST00000556536 RAPGEF4Q8WZA2 1011 aa23.17■■□□□ 1.3
TUBB3-211ENST00000556536 ONECUT3O60422 494 aaPredicted RBP23.15■■□□□ 1.3
TUBB3-211ENST00000556536 TATP17735 454 aaPredicted RBP23.15■■□□□ 1.3
TUBB3-211ENST00000556536 CCDC146Q8IYE0 955 aa23.14■■□□□ 1.29
TUBB3-211ENST00000556536 PLEKHF1Q96S99 279 aa23.14■■□□□ 1.29
TUBB3-211ENST00000556536 KRT27Q7Z3Y8 459 aa23.13■■□□□ 1.29
TUBB3-211ENST00000556536 PHACTR3Q96KR7 559 aa23.13■■□□□ 1.29
TUBB3-211ENST00000556536 OVOS2A0A0G2JMS6 1433 aa23.13■■□□□ 1.29
TUBB3-211ENST00000556536 CDCA7Q9BWT1 371 aaPredicted RBP23.12■■□□□ 1.29
TUBB3-211ENST00000556536 A0A0G2JS52 829 aa23.09■■□□□ 1.29
TUBB3-211ENST00000556536 MYT1Q01538 1121 aa23.09■■□□□ 1.29
TUBB3-211ENST00000556536 RUNDC1Q96C34 613 aa23.09■■□□□ 1.29
TUBB3-211ENST00000556536 PNNQ9H307 717 aaKnown RBP23.09■■□□□ 1.29
TUBB3-211ENST00000556536 BAG6P46379 1132 aa23.08■■□□□ 1.29
TUBB3-211ENST00000556536 PLEKHO1Q53GL0 409 aaPredicted RBP23.08■■□□□ 1.29
TUBB3-211ENST00000556536 ZCRB1Q8TBF4 217 aaKnown RBP23.08■■□□□ 1.29
TUBB3-211ENST00000556536 THSD7AQ9UPZ6 1657 aa23.07■■□□□ 1.28
TUBB3-211ENST00000556536 MTHFSDQ2M296 383 aaKnown RBP23.07■■□□□ 1.28
TUBB3-211ENST00000556536 WNK3Q9BYP7 1800 aa23.06■■□□□ 1.28
TUBB3-211ENST00000556536 EXOC5O00471 708 aa23.06■■□□□ 1.28
TUBB3-211ENST00000556536 DDB1Q16531 1140 aa23.06■■□□□ 1.28
TUBB3-211ENST00000556536 AMOTQ4VCS5 1084 aa23.06■■□□□ 1.28
TUBB3-211ENST00000556536 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.06■■□□□ 1.28
TUBB3-211ENST00000556536 SPG7Q9UQ90 795 aa23.06■■□□□ 1.28
TUBB3-211ENST00000556536 MAPK8IP3Q9UPT6 1336 aa23.06■■□□□ 1.28
TUBB3-211ENST00000556536 PLEKHG2Q9H7P9 1386 aa23.05■■□□□ 1.28
TUBB3-211ENST00000556536 TNS2Q63HR2 1409 aa23.05■■□□□ 1.28
TUBB3-211ENST00000556536 PARP4Q9UKK3 1724 aaKnown RBP23.05■■□□□ 1.28
TUBB3-211ENST00000556536 SENP3-EIF4A1A0A087X0R7 540 aa23.04■■□□□ 1.28
TUBB3-211ENST00000556536 ZNF530Q6P9A1 599 aaPredicted RBP23.04■■□□□ 1.28
TUBB3-211ENST00000556536 LRRC37A3O60309 1634 aa23.04■■□□□ 1.28
TUBB3-211ENST00000556536 PSDA5PKW4 1024 aaPredicted RBP23.03■■□□□ 1.28
TUBB3-211ENST00000556536 CYP27B1O15528 508 aa23.03■■□□□ 1.28
TUBB3-211ENST00000556536 NEFMP07197 916 aa23.03■■□□□ 1.28
TUBB3-211ENST00000556536 DDX54Q8TDD1 881 aaKnown RBP23.03■■□□□ 1.28
TUBB3-211ENST00000556536 APAF1O14727 1248 aa23.02■■□□□ 1.28
TUBB3-211ENST00000556536 NFE2L2Q16236 605 aa23.01■■□□□ 1.27
TUBB3-211ENST00000556536 MARCH10Q8NA82 808 aaPredicted RBP23.01■■□□□ 1.27
TUBB3-211ENST00000556536 GAS2L2Q8NHY3 880 aa23.01■■□□□ 1.27
TUBB3-211ENST00000556536 RRP7AQ9Y3A4 280 aaKnown RBP23.01■■□□□ 1.27
TUBB3-211ENST00000556536 PKD1L3Q7Z443 1732 aa23.01■■□□□ 1.27
TUBB3-211ENST00000556536 PCDH11XQ9BZA7 1347 aa23.01■■□□□ 1.27
TUBB3-211ENST00000556536 PCDH11YQ9BZA8 1340 aa23.01■■□□□ 1.27
TUBB3-211ENST00000556536 PHKG2P15735 406 aa23■■□□□ 1.27
TUBB3-211ENST00000556536 TMPOP42166 694 aaKnown RBP23■■□□□ 1.27
TUBB3-211ENST00000556536 PDE3BQ13370 1112 aa22.99■■□□□ 1.27
TUBB3-211ENST00000556536 AKAP4Q5JQC9 854 aa22.98■■□□□ 1.27
TUBB3-211ENST00000556536 IFNL2Q8IZJ0 200 aa22.98■■□□□ 1.27
TUBB3-211ENST00000556536 SHANK3Q9BYB0 1731 aa22.97■■□□□ 1.27
TUBB3-211ENST00000556536 NEUROD2Q15784 382 aa22.97■■□□□ 1.27
TUBB3-211ENST00000556536 C1orf141Q5JVX7 400 aa22.97■■□□□ 1.27
TUBB3-211ENST00000556536 FAM182BQ5T319 152 aa22.97■■□□□ 1.27
TUBB3-211ENST00000556536 RIPK4P57078 832 aa22.96■■□□□ 1.27
TUBB3-211ENST00000556536 EN1Q05925 392 aaPredicted RBP22.95■■□□□ 1.26
TUBB3-211ENST00000556536 MAP3K5Q99683 1374 aa22.95■■□□□ 1.26
TUBB3-211ENST00000556536 GNAT3A8MTJ3 354 aa22.94■■□□□ 1.26
TUBB3-211ENST00000556536 NKX1-1Q15270 411 aaPredicted RBP22.94■■□□□ 1.26
TUBB3-211ENST00000556536 MPRIPQ6WCQ1 1025 aa22.94■■□□□ 1.26
TUBB3-211ENST00000556536 TRIM35Q9UPQ4 493 aa22.93■■□□□ 1.26
TUBB3-211ENST00000556536 SALL2Q9Y467 1007 aaPredicted RBP22.93■■□□□ 1.26
TUBB3-211ENST00000556536 DCTN1Q14203 1278 aa22.92■■□□□ 1.26
TUBB3-211ENST00000556536 LGR6Q9HBX8 967 aa22.92■■□□□ 1.26
TUBB3-211ENST00000556536 KDM6AO15550 1401 aaPredicted RBP22.91■■□□□ 1.26
TUBB3-211ENST00000556536 R3HDM1Q15032 1099 aaKnown RBP22.91■■□□□ 1.26
TUBB3-211ENST00000556536 MCM10Q7L590 875 aa22.91■■□□□ 1.26
TUBB3-211ENST00000556536 IL17REQ8NFR9 667 aa22.91■■□□□ 1.26
TUBB3-211ENST00000556536 RNMTO43148 476 aaKnown RBP22.9■■□□□ 1.26
TUBB3-211ENST00000556536 HSP90AB1P08238 724 aaKnown RBP22.9■■□□□ 1.26
TUBB3-211ENST00000556536 DCAF5Q96JK2 942 aa22.9■■□□□ 1.26
TUBB3-211ENST00000556536 HTATSF1O43719 755 aaKnown RBP22.89■■□□□ 1.25
TUBB3-211ENST00000556536 RTF1Q92541 710 aaKnown RBP22.89■■□□□ 1.25
TUBB3-211ENST00000556536 THUMPD2Q9BTF0 503 aaKnown RBP22.89■■□□□ 1.25
TUBB3-211ENST00000556536 TNS1Q9HBL0 1735 aaKnown RBP22.88■■□□□ 1.25
TUBB3-211ENST00000556536 HNRNPUQ00839 825 aaKnown RBP eCLIP22.87■■□□□ 1.25
TUBB3-211ENST00000556536 LMOD3Q0VAK6 560 aa22.87■■□□□ 1.25
TUBB3-211ENST00000556536 ACSBG1Q96GR2 724 aa22.87■■□□□ 1.25
TUBB3-211ENST00000556536 NCBP3Q53F19 620 aaKnown RBP22.86■■□□□ 1.25
TUBB3-211ENST00000556536 CEMIPQ8WUJ3 1361 aa22.86■■□□□ 1.25
TUBB3-211ENST00000556536 BCL9O00512 1426 aa22.85■■□□□ 1.25
TUBB3-211ENST00000556536 CCDC27Q2M243 656 aa22.85■■□□□ 1.25
TUBB3-211ENST00000556536 WWC1Q8IX03 1113 aa22.85■■□□□ 1.25
TUBB3-211ENST00000556536 EZH2Q15910 746 aaKnown RBP22.84■■□□□ 1.25
TUBB3-211ENST00000556536 FAM196AQ6ZSG2 479 aa22.84■■□□□ 1.25
TUBB3-211ENST00000556536 ERVV-2B6SEH9 535 aa22.83■■□□□ 1.25
TUBB3-211ENST00000556536 KCNQ2O43526 872 aa22.83■■□□□ 1.25
TUBB3-211ENST00000556536 PRIM1P49642 420 aaKnown RBP22.83■■□□□ 1.25
TUBB3-211ENST00000556536 NGEFQ8N5V2 710 aa22.83■■□□□ 1.25
TUBB3-211ENST00000556536 ADAMTS7Q9UKP4 1686 aa22.83■■□□□ 1.24
TUBB3-211ENST00000556536 PTF1AQ7RTS3 328 aa22.82■■□□□ 1.24
TUBB3-211ENST00000556536 DLG5Q8TDM6 1919 aa22.82■■□□□ 1.24
TUBB3-211ENST00000556536 TOGARAM1Q9Y4F4 1720 aa22.82■■□□□ 1.24
TUBB3-211ENST00000556536 CABP4P57796 275 aa22.81■■□□□ 1.24
TUBB3-211ENST00000556536 NFATC2IPQ8NCF5 419 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms