RNA–Protein interactions for RNA: ENST00000556527.1

CRX-203, Transcript of cone-rod homeobox, humanhuman

TSL 1 (best)

Gene CRX, Length 164 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRX-203ENST00000556527 KAT6BQ8WYB5 2073 aa13.71□□□□□ -0.21
CRX-203ENST00000556527 PAPPAQ13219 1627 aa13.71□□□□□ -0.22
CRX-203ENST00000556527 HMGB2P26583 209 aaKnown RBP13.7□□□□□ -0.22
CRX-203ENST00000556527 TMF1P82094 1093 aa13.7□□□□□ -0.22
CRX-203ENST00000556527 CCNL1Q9UK58 526 aaPredicted RBP13.7□□□□□ -0.22
CRX-203ENST00000556527 RTL1A6NKG5 1358 aa13.7□□□□□ -0.22
CRX-203ENST00000556527 USP47Q96K76 1375 aa13.7□□□□□ -0.22
CRX-203ENST00000556527 KCNQ4P56696 695 aa13.69□□□□□ -0.22
CRX-203ENST00000556527 TESK2Q96S53 571 aa13.69□□□□□ -0.22
CRX-203ENST00000556527 CGNL1Q0VF96 1302 aa13.68□□□□□ -0.22
CRX-203ENST00000556527 PNPLA7Q6ZV29 1317 aa13.68□□□□□ -0.22
CRX-203ENST00000556527 TATP17735 454 aaPredicted RBP13.68□□□□□ -0.22
CRX-203ENST00000556527 FBLN1P23142 703 aa13.68□□□□□ -0.22
CRX-203ENST00000556527 RRS1Q15050 365 aaKnown RBP13.68□□□□□ -0.22
CRX-203ENST00000556527 CDCA8Q53HL2 280 aa13.68□□□□□ -0.22
CRX-203ENST00000556527 GGNBP2Q9H3C7 697 aa13.67□□□□□ -0.22
CRX-203ENST00000556527 SENP3-EIF4A1A0A087X0R7 540 aa13.66□□□□□ -0.22
CRX-203ENST00000556527 USHBP1Q8N6Y0 703 aa13.66□□□□□ -0.22
CRX-203ENST00000556527 PCDH11XQ9BZA7 1347 aa13.65□□□□□ -0.22
CRX-203ENST00000556527 PCDH11YQ9BZA8 1340 aa13.65□□□□□ -0.22
CRX-203ENST00000556527 MEGF6O75095 1541 aa13.65□□□□□ -0.22
CRX-203ENST00000556527 DOT1LQ8TEK3 1739 aa13.65□□□□□ -0.22
CRX-203ENST00000556527 NBPF6Q5VWK0 638 aa13.65□□□□□ -0.22
CRX-203ENST00000556527 NBPF4Q96M43 638 aa13.65□□□□□ -0.22
CRX-203ENST00000556527 FYB1O15117 783 aa13.64□□□□□ -0.23
CRX-203ENST00000556527 NSD2O96028 1365 aa13.63□□□□□ -0.23
CRX-203ENST00000556527 GRIN3BO60391 1043 aa13.63□□□□□ -0.23
CRX-203ENST00000556527 GIGYF1O75420 1035 aaPredicted RBP13.63□□□□□ -0.23
CRX-203ENST00000556527 C1QTNF8P60827 252 aa13.63□□□□□ -0.23
CRX-203ENST00000556527 FLAD1Q8NFF5 587 aa13.63□□□□□ -0.23
CRX-203ENST00000556527 QSER1Q2KHR3 1735 aa13.62□□□□□ -0.23
CRX-203ENST00000556527 FLT4P35916 1363 aa13.62□□□□□ -0.23
CRX-203ENST00000556527 PPM1GO15355 546 aaPredicted RBP13.62□□□□□ -0.23
CRX-203ENST00000556527 MSL1Q68DK7 614 aa13.62□□□□□ -0.23
CRX-203ENST00000556527 MPRIPQ6WCQ1 1025 aa13.62□□□□□ -0.23
CRX-203ENST00000556527 NLGN2Q8NFZ4 835 aa13.62□□□□□ -0.23
CRX-203ENST00000556527 CHD4Q14839 1912 aa13.62□□□□□ -0.23
CRX-203ENST00000556527 UTRNP46939 3433 aa13.62□□□□□ -0.23
CRX-203ENST00000556527 INSRP06213 1382 aa13.61□□□□□ -0.23
CRX-203ENST00000556527 HSP90AB2PQ58FF8 381 aa13.61□□□□□ -0.23
CRX-203ENST00000556527 COL23A1Q86Y22 540 aaPredicted RBP13.61□□□□□ -0.23
CRX-203ENST00000556527 KIF24Q5T7B8 1368 aa13.6□□□□□ -0.23
CRX-203ENST00000556527 PALLDQ8WX93 1383 aa13.6□□□□□ -0.23
CRX-203ENST00000556527 LY75O60449 1722 aa13.6□□□□□ -0.23
CRX-203ENST00000556527 SMARCC1Q92922 1105 aaPredicted RBP13.6□□□□□ -0.23
CRX-203ENST00000556527 AK7Q96M32 723 aa13.6□□□□□ -0.23
CRX-203ENST00000556527 RGPD2P0DJD1 1756 aa13.59□□□□□ -0.23
CRX-203ENST00000556527 SPG7Q9UQ90 795 aa13.59□□□□□ -0.23
CRX-203ENST00000556527 NSD3Q9BZ95 1437 aa13.57□□□□□ -0.24
CRX-203ENST00000556527 SHANK3Q9BYB0 1731 aa13.57□□□□□ -0.24
CRX-203ENST00000556527 TUBGCP6Q96RT7 1819 aa13.57□□□□□ -0.24
CRX-203ENST00000556527 PHF14O94880 888 aa13.56□□□□□ -0.24
CRX-203ENST00000556527 YBX3P16989 372 aaKnown RBP eCLIP13.56□□□□□ -0.24
CRX-203ENST00000556527 CD2APQ9Y5K6 639 aa13.56□□□□□ -0.24
CRX-203ENST00000556527 EMILIN1Q9Y6C2 1016 aa13.56□□□□□ -0.24
CRX-203ENST00000556527 KIF20BQ96Q89 1820 aa13.55□□□□□ -0.24
CRX-203ENST00000556527 CYP27B1O15528 508 aa13.55□□□□□ -0.24
CRX-203ENST00000556527 POLR3GLQ9BT43 218 aa13.55□□□□□ -0.24
CRX-203ENST00000556527 TMOD3Q9NYL9 352 aa13.55□□□□□ -0.24
CRX-203ENST00000556527 C5P01031 1676 aa13.55□□□□□ -0.24
CRX-203ENST00000556527 COL24A1Q17RW2 1714 aa13.54□□□□□ -0.24
CRX-203ENST00000556527 TRIM26Q12899 539 aaPredicted RBP13.53□□□□□ -0.24
CRX-203ENST00000556527 PIGBQ92521 554 aa13.53□□□□□ -0.24
CRX-203ENST00000556527 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.52□□□□□ -0.25
CRX-203ENST00000556527 CARD14Q9BXL6 1004 aa13.52□□□□□ -0.25
CRX-203ENST00000556527 GPBP1L1Q9HC44 474 aaPredicted RBP13.52□□□□□ -0.25
CRX-203ENST00000556527 GOLGB1Q14789 3259 aaKnown RBP13.52□□□□□ -0.25
CRX-203ENST00000556527 WASHC2AQ641Q2 1341 aa13.51□□□□□ -0.25
CRX-203ENST00000556527 LOC102724428A0A0B4J2F2 783 aa13.51□□□□□ -0.25
CRX-203ENST00000556527 SSFA2P28290 1259 aa13.51□□□□□ -0.25
CRX-203ENST00000556527 SIK1P57059 783 aa13.51□□□□□ -0.25
CRX-203ENST00000556527 IFNL2Q8IZJ0 200 aa13.51□□□□□ -0.25
CRX-203ENST00000556527 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.51□□□□□ -0.25
CRX-203ENST00000556527 C4BP0C0L5 1744 aa13.5□□□□□ -0.25
CRX-203ENST00000556527 ATP10DQ9P241 1426 aa13.5□□□□□ -0.25
CRX-203ENST00000556527 GNPATO15228 680 aa13.5□□□□□ -0.25
CRX-203ENST00000556527 ATP6V1AP38606 617 aa13.5□□□□□ -0.25
CRX-203ENST00000556527 TNNT2P45379 298 aaPredicted RBP13.5□□□□□ -0.25
CRX-203ENST00000556527 NKX1-1Q15270 411 aaPredicted RBP13.5□□□□□ -0.25
CRX-203ENST00000556527 IGSF1Q8N6C5 1336 aa13.49□□□□□ -0.25
CRX-203ENST00000556527 ZNF526Q8TF50 670 aaPredicted RBP13.49□□□□□ -0.25
CRX-203ENST00000556527 EYA1Q99502 592 aa13.49□□□□□ -0.25
CRX-203ENST00000556527 WWC3Q9ULE0 1092 aa13.49□□□□□ -0.25
CRX-203ENST00000556527 PKD1L3Q7Z443 1732 aa13.48□□□□□ -0.25
CRX-203ENST00000556527 TIMELESSQ9UNS1 1208 aa13.48□□□□□ -0.25
CRX-203ENST00000556527 PHKG2P15735 406 aa13.47□□□□□ -0.25
CRX-203ENST00000556527 LINC00116Q8NCU8 138 aa13.47□□□□□ -0.25
CRX-203ENST00000556527 ASAP1Q9ULH1 1129 aa13.47□□□□□ -0.25
CRX-203ENST00000556527 TOGARAM1Q9Y4F4 1720 aa13.47□□□□□ -0.25
CRX-203ENST00000556527 TAF1LQ8IZX4 1826 aa13.46□□□□□ -0.25
CRX-203ENST00000556527 HSP90AB1P08238 724 aaKnown RBP13.46□□□□□ -0.25
CRX-203ENST00000556527 SMIM5Q71RC9 77 aa13.46□□□□□ -0.25
CRX-203ENST00000556527 RBM42Q9BTD8 480 aaKnown RBP13.46□□□□□ -0.25
CRX-203ENST00000556527 POLKQ9UBT6 870 aa13.46□□□□□ -0.25
CRX-203ENST00000556527 RTCBQ9Y3I0 505 aaKnown RBP13.46□□□□□ -0.25
CRX-203ENST00000556527 NCAPD2Q15021 1401 aa13.46□□□□□ -0.26
CRX-203ENST00000556527 ITGB4P16144 1822 aa13.46□□□□□ -0.26
CRX-203ENST00000556527 MMP10P09238 476 aa13.45□□□□□ -0.26
CRX-203ENST00000556527 TRAPPC3LQ5T215 181 aa13.45□□□□□ -0.26
CRX-203ENST00000556527 AMIGO3Q86WK7 504 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms