RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 FAM196AQ6ZSG2 479 aa9.49□□□□□ -0.89
PSEN1-216ENST00000556066 BARGINQ6ZT62 677 aa9.49□□□□□ -0.89
PSEN1-216ENST00000556066 FAM212AQ96EL1 285 aa9.49□□□□□ -0.89
PSEN1-216ENST00000556066 SLIT3O75094 1523 aa9.49□□□□□ -0.89
PSEN1-216ENST00000556066 TTC21BQ7Z4L5 1316 aa9.49□□□□□ -0.89
PSEN1-216ENST00000556066 KTN1Q86UP2 1357 aaKnown RBP9.49□□□□□ -0.89
PSEN1-216ENST00000556066 MON2Q7Z3U7 1717 aa9.48□□□□□ -0.89
PSEN1-216ENST00000556066 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.48□□□□□ -0.89
PSEN1-216ENST00000556066 TMC1Q8TDI8 760 aa9.48□□□□□ -0.89
PSEN1-216ENST00000556066 CAMKK2Q96RR4 588 aa9.48□□□□□ -0.89
PSEN1-216ENST00000556066 DISP2A7MBM2 1401 aa9.48□□□□□ -0.89
PSEN1-216ENST00000556066 CRB1P82279 1406 aa9.48□□□□□ -0.89
PSEN1-216ENST00000556066 COL18A1P39060 1754 aa9.47□□□□□ -0.89
PSEN1-216ENST00000556066 TRIM26Q12899 539 aaPredicted RBP9.47□□□□□ -0.89
PSEN1-216ENST00000556066 EZH2Q15910 746 aaKnown RBP9.47□□□□□ -0.89
PSEN1-216ENST00000556066 TOM1L2Q6ZVM7 507 aa9.47□□□□□ -0.89
PSEN1-216ENST00000556066 TMEM106CQ9BVX2 250 aa9.47□□□□□ -0.89
PSEN1-216ENST00000556066 THRAP3Q9Y2W1 955 aaKnown RBP9.47□□□□□ -0.89
PSEN1-216ENST00000556066 PARP4Q9UKK3 1724 aaKnown RBP9.47□□□□□ -0.89
PSEN1-216ENST00000556066 AATKQ6ZMQ8 1374 aa9.47□□□□□ -0.89
PSEN1-216ENST00000556066 ST18O60284 1047 aa9.46□□□□□ -0.9
PSEN1-216ENST00000556066 APBA3O96018 575 aa9.46□□□□□ -0.9
PSEN1-216ENST00000556066 CSB-PGBD3P0DP91 1061 aa9.46□□□□□ -0.9
PSEN1-216ENST00000556066 DCAF8Q5TAQ9 597 aa9.46□□□□□ -0.9
PSEN1-216ENST00000556066 KCNH5Q8NCM2 988 aa9.46□□□□□ -0.9
PSEN1-216ENST00000556066 TTC21AQ8NDW8 1320 aa9.46□□□□□ -0.9
PSEN1-216ENST00000556066 CPSF1Q10570 1443 aaKnown RBP9.46□□□□□ -0.9
PSEN1-216ENST00000556066 WNK3Q9BYP7 1800 aa9.45□□□□□ -0.9
PSEN1-216ENST00000556066 KAT6BQ8WYB5 2073 aa9.45□□□□□ -0.9
PSEN1-216ENST00000556066 AXIN2Q9Y2T1 843 aa9.45□□□□□ -0.9
PSEN1-216ENST00000556066 SBNO2Q9Y2G9 1366 aa9.45□□□□□ -0.9
PSEN1-216ENST00000556066 LRRC37A3O60309 1634 aa9.45□□□□□ -0.9
PSEN1-216ENST00000556066 LTN1O94822 1766 aa9.45□□□□□ -0.9
PSEN1-216ENST00000556066 SBF2Q86WG5 1849 aa9.45□□□□□ -0.9
PSEN1-216ENST00000556066 RGL2O15211 777 aa9.44□□□□□ -0.9
PSEN1-216ENST00000556066 HDGFL2Q7Z4V5 671 aaPredicted RBP9.44□□□□□ -0.9
PSEN1-216ENST00000556066 ARHGEF25Q86VW2 580 aa9.44□□□□□ -0.9
PSEN1-216ENST00000556066 TMEM121BQ9BXQ6 578 aaPredicted RBP9.44□□□□□ -0.9
PSEN1-216ENST00000556066 SLC12A5Q9H2X9 1139 aa9.44□□□□□ -0.9
PSEN1-216ENST00000556066 WDR17Q8IZU2 1322 aa9.44□□□□□ -0.9
PSEN1-216ENST00000556066 NFAT5O94916 1531 aa9.43□□□□□ -0.9
PSEN1-216ENST00000556066 YY1P25490 414 aa9.43□□□□□ -0.9
PSEN1-216ENST00000556066 DDB1Q16531 1140 aa9.43□□□□□ -0.9
PSEN1-216ENST00000556066 NME9Q86XW9 330 aa9.43□□□□□ -0.9
PSEN1-216ENST00000556066 TERF2IPQ9NYB0 399 aa9.43□□□□□ -0.9
PSEN1-216ENST00000556066 CD163L1Q9NR16 1453 aa9.42□□□□□ -0.9
PSEN1-216ENST00000556066 ST20-MTHFSA0A0A6YYL1 179 aa9.42□□□□□ -0.9
PSEN1-216ENST00000556066 IFNL1Q8IU54 200 aa9.42□□□□□ -0.9
PSEN1-216ENST00000556066 NUP188Q5SRE5 1749 aa9.42□□□□□ -0.9
PSEN1-216ENST00000556066 PEAK1Q9H792 1746 aa9.42□□□□□ -0.9
PSEN1-216ENST00000556066 RREB1Q92766 1687 aa9.42□□□□□ -0.9
PSEN1-216ENST00000556066 OVOS2A0A0G2JMS6 1433 aa9.41□□□□□ -0.9
PSEN1-216ENST00000556066 OVOS2A0A0J9YW53 1432 aa9.41□□□□□ -0.9
PSEN1-216ENST00000556066 OVOS2Q6IE36 1432 aa9.41□□□□□ -0.9
PSEN1-216ENST00000556066 CARD10Q9BWT7 1032 aa9.41□□□□□ -0.9
PSEN1-216ENST00000556066 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.41□□□□□ -0.9
PSEN1-216ENST00000556066 USP54Q70EL1 1684 aa9.41□□□□□ -0.9
PSEN1-216ENST00000556066 EDC4Q6P2E9 1401 aaKnown RBP9.4□□□□□ -0.9
PSEN1-216ENST00000556066 A0A1W2PP64 1363 aa9.4□□□□□ -0.9
PSEN1-216ENST00000556066 PARD3Q8TEW0 1356 aa9.4□□□□□ -0.9
PSEN1-216ENST00000556066 C11orf95C9JLR9 678 aaPredicted RBP9.4□□□□□ -0.9
PSEN1-216ENST00000556066 CDCA7Q9BWT1 371 aaPredicted RBP9.4□□□□□ -0.9
PSEN1-216ENST00000556066 NLRP2Q9NX02 1062 aa9.4□□□□□ -0.9
PSEN1-216ENST00000556066 USP31Q70CQ4 1352 aa9.39□□□□□ -0.91
PSEN1-216ENST00000556066 EXOC5O00471 708 aa9.39□□□□□ -0.91
PSEN1-216ENST00000556066 NBPF14Q5TI25 921 aa9.39□□□□□ -0.91
PSEN1-216ENST00000556066 MARCH10Q8NA82 808 aaPredicted RBP9.39□□□□□ -0.91
PSEN1-216ENST00000556066 TESK2Q96S53 571 aa9.39□□□□□ -0.91
PSEN1-216ENST00000556066 OCEL1Q9H607 264 aa9.39□□□□□ -0.91
PSEN1-216ENST00000556066 CCDC7Q96M83 1385 aa9.38□□□□□ -0.91
PSEN1-216ENST00000556066 ABCC6O95255 1503 aa9.38□□□□□ -0.91
PSEN1-216ENST00000556066 CHRM1P11229 460 aaPredicted RBP9.38□□□□□ -0.91
PSEN1-216ENST00000556066 PTF1AQ7RTS3 328 aa9.38□□□□□ -0.91
PSEN1-216ENST00000556066 PUS7Q96PZ0 661 aaKnown RBP9.38□□□□□ -0.91
PSEN1-216ENST00000556066 USP47Q96K76 1375 aa9.37□□□□□ -0.91
PSEN1-216ENST00000556066 ERBB3P21860 1342 aa9.37□□□□□ -0.91
PSEN1-216ENST00000556066 ANKRD24Q8TF21 1146 aa9.37□□□□□ -0.91
PSEN1-216ENST00000556066 LTV1Q96GA3 475 aaPredicted RBP9.37□□□□□ -0.91
PSEN1-216ENST00000556066 PCGF6Q9BYE7 350 aa9.37□□□□□ -0.91
PSEN1-216ENST00000556066 BCL11BQ9C0K0 894 aaPredicted RBP9.37□□□□□ -0.91
PSEN1-216ENST00000556066 RGPD3A6NKT7 1758 aaPredicted RBP9.37□□□□□ -0.91
PSEN1-216ENST00000556066 RGPD4Q7Z3J3 1758 aa9.37□□□□□ -0.91
PSEN1-216ENST00000556066 NINLQ9Y2I6 1382 aa9.37□□□□□ -0.91
PSEN1-216ENST00000556066 KCNQ2O43526 872 aa9.36□□□□□ -0.91
PSEN1-216ENST00000556066 TMF1P82094 1093 aa9.36□□□□□ -0.91
PSEN1-216ENST00000556066 COG3Q96JB2 828 aa9.36□□□□□ -0.91
PSEN1-216ENST00000556066 ARXQ96QS3 562 aa9.36□□□□□ -0.91
PSEN1-216ENST00000556066 SPON1Q9HCB6 807 aa9.36□□□□□ -0.91
PSEN1-216ENST00000556066 RGPD2P0DJD1 1756 aa9.36□□□□□ -0.91
PSEN1-216ENST00000556066 PLSCR1O15162 318 aa9.35□□□□□ -0.91
PSEN1-216ENST00000556066 IL2RBP14784 551 aa9.35□□□□□ -0.91
PSEN1-216ENST00000556066 FBLN1P23142 703 aa9.35□□□□□ -0.91
PSEN1-216ENST00000556066 IRX5P78411 483 aaPredicted RBP9.35□□□□□ -0.91
PSEN1-216ENST00000556066 TNS2Q63HR2 1409 aa9.35□□□□□ -0.91
PSEN1-216ENST00000556066 RNF25Q96BH1 459 aaPredicted RBP9.35□□□□□ -0.91
PSEN1-216ENST00000556066 ACSBG1Q96GR2 724 aa9.35□□□□□ -0.91
PSEN1-216ENST00000556066 UTRNP46939 3433 aa9.35□□□□□ -0.91
PSEN1-216ENST00000556066 FAM208AQ9UK61 1670 aaKnown RBP9.35□□□□□ -0.91
PSEN1-216ENST00000556066 KIF20BQ96Q89 1820 aa9.34□□□□□ -0.91
PSEN1-216ENST00000556066 AMPHP49418 695 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms