RNA–Protein interactions for RNA: ENST00000555961.1

NEK9-208, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-208ENST00000555961 PCDHB9Q9Y5E1 797 aa3.87□□□□□ -1.79
NEK9-208ENST00000555961 ZBBXA8MT70 800 aa3.86□□□□□ -1.79
NEK9-208ENST00000555961 SV2AQ7L0J3 742 aa3.86□□□□□ -1.79
NEK9-208ENST00000555961 ZNF784Q8NCA9 323 aaPredicted RBP3.86□□□□□ -1.79
NEK9-208ENST00000555961 CNTNAP3BQ96NU0 1288 aa3.86□□□□□ -1.79
NEK9-208ENST00000555961 CNTNAP3Q9BZ76 1288 aa3.86□□□□□ -1.79
NEK9-208ENST00000555961 ZNF395Q9H8N7 513 aaPredicted RBP3.86□□□□□ -1.79
NEK9-208ENST00000555961 HMX1Q9NP08 348 aaPredicted RBP3.86□□□□□ -1.79
NEK9-208ENST00000555961 TMPRSS4Q9NRS4 437 aa3.86□□□□□ -1.79
NEK9-208ENST00000555961 ERVH48-1M5A8F1 160 aa3.85□□□□□ -1.79
NEK9-208ENST00000555961 PRKCSHP14314 528 aaPredicted RBP3.85□□□□□ -1.79
NEK9-208ENST00000555961 ITGA6P23229 1130 aa3.85□□□□□ -1.79
NEK9-208ENST00000555961 PTGIRP43119 386 aa3.85□□□□□ -1.79
NEK9-208ENST00000555961 CTSOP43234 321 aaPredicted RBP3.85□□□□□ -1.79
NEK9-208ENST00000555961 MCCD1P59942 119 aaPredicted RBP3.85□□□□□ -1.79
NEK9-208ENST00000555961 RNF20Q5VTR2 975 aa3.85□□□□□ -1.79
NEK9-208ENST00000555961 EPS8L1Q8TE68 723 aa3.85□□□□□ -1.79
NEK9-208ENST00000555961 COL25A1Q9BXS0 654 aaPredicted RBP3.85□□□□□ -1.79
NEK9-208ENST00000555961 CYLDQ9NQC7 956 aa3.85□□□□□ -1.79
NEK9-208ENST00000555961 DNMT3AQ9Y6K1 912 aaPredicted RBP3.85□□□□□ -1.79
NEK9-208ENST00000555961 SLC35F4A4IF30 521 aa3.84□□□□□ -1.79
NEK9-208ENST00000555961 ESPNB1AK53 854 aa3.84□□□□□ -1.79
NEK9-208ENST00000555961 FBXO31Q5XUX0 539 aaPredicted RBP3.84□□□□□ -1.79
NEK9-208ENST00000555961 FOXR1Q6PIV2 292 aa3.84□□□□□ -1.79
NEK9-208ENST00000555961 LYSMD3Q7Z3D4 306 aa3.84□□□□□ -1.79
NEK9-208ENST00000555961 SVOPQ8N4V2 548 aa3.84□□□□□ -1.79
NEK9-208ENST00000555961 IL27Q8NEV9 243 aa3.84□□□□□ -1.79
NEK9-208ENST00000555961 RNF217Q8TC41 542 aa3.84□□□□□ -1.79
NEK9-208ENST00000555961 NANOS1Q8WY41 292 aaKnown RBP3.84□□□□□ -1.79
NEK9-208ENST00000555961 NLRP3Q96P20 1036 aa3.84□□□□□ -1.79
NEK9-208ENST00000555961 OCSTAMPQ9BR26 566 aa3.84□□□□□ -1.79
NEK9-208ENST00000555961 ATP5J2-PTCD1G3V325 749 aa3.83□□□□□ -1.8
NEK9-208ENST00000555961 MEN1O00255 615 aa3.83□□□□□ -1.8
NEK9-208ENST00000555961 MAP3K10Q02779 954 aa3.83□□□□□ -1.8
NEK9-208ENST00000555961 TMEM132AQ24JP5 1023 aa3.83□□□□□ -1.8
NEK9-208ENST00000555961 VWA5B2Q8N398 1253 aa3.83□□□□□ -1.8
NEK9-208ENST00000555961 PRM3Q9NNZ6 103 aa3.83□□□□□ -1.8
NEK9-208ENST00000555961 LILRA1O75019 489 aa3.82□□□□□ -1.8
NEK9-208ENST00000555961 GTF2E1P29083 439 aaPredicted RBP3.82□□□□□ -1.8
NEK9-208ENST00000555961 MARSP56192 900 aaKnown RBP3.82□□□□□ -1.8
NEK9-208ENST00000555961 NR1H3Q13133 447 aa3.82□□□□□ -1.8
NEK9-208ENST00000555961 SLC27A3Q5K4L6 730 aa3.82□□□□□ -1.8
NEK9-208ENST00000555961 CC2D2BQ6DHV5 1058 aa3.82□□□□□ -1.8
NEK9-208ENST00000555961 CYP2U1Q7Z449 544 aa3.82□□□□□ -1.8
NEK9-208ENST00000555961 TRIM34Q9BYJ4 488 aa3.82□□□□□ -1.8
NEK9-208ENST00000555961 NDUFB9Q9Y6M9 179 aa3.82□□□□□ -1.8
NEK9-208ENST00000555961 H7C1W4 665 aa3.81□□□□□ -1.8
NEK9-208ENST00000555961 GIGYF1O75420 1035 aaPredicted RBP3.81□□□□□ -1.8
NEK9-208ENST00000555961 FBXO45P0C2W1 286 aa3.81□□□□□ -1.8
NEK9-208ENST00000555961 RHOQP17081 205 aa3.81□□□□□ -1.8
NEK9-208ENST00000555961 GPC1P35052 558 aa3.81□□□□□ -1.8
NEK9-208ENST00000555961 ADD1P35611 737 aaKnown RBP3.81□□□□□ -1.8
NEK9-208ENST00000555961 RNF144AP50876 292 aaPredicted RBP3.81□□□□□ -1.8
NEK9-208ENST00000555961 FOXD4L5Q5VV16 416 aaPredicted RBP3.81□□□□□ -1.8
NEK9-208ENST00000555961 RIPOR1Q6ZS17 1223 aa3.81□□□□□ -1.8
NEK9-208ENST00000555961 PRICKLE2Q7Z3G6 844 aa3.81□□□□□ -1.8
NEK9-208ENST00000555961 GPR161Q8N6U8 529 aaKnown RBP3.81□□□□□ -1.8
NEK9-208ENST00000555961 BANK1Q8NDB2 785 aa3.81□□□□□ -1.8
NEK9-208ENST00000555961 GMCL1Q96IK5 515 aa3.81□□□□□ -1.8
NEK9-208ENST00000555961 TRERF1Q96PN7 1200 aa3.81□□□□□ -1.8
NEK9-208ENST00000555961 ENAMQ9NRM1 1142 aa3.81□□□□□ -1.8
NEK9-208ENST00000555961 PCDHB11Q9Y5F2 797 aa3.81□□□□□ -1.8
NEK9-208ENST00000555961 MYCP01106 439 aaPredicted RBP3.8□□□□□ -1.8
NEK9-208ENST00000555961 KRT76Q01546 638 aa3.8□□□□□ -1.8
NEK9-208ENST00000555961 NSFL1CQ9UNZ2 370 aaKnown RBP3.8□□□□□ -1.8
NEK9-208ENST00000555961 ADAMTS8Q9UP79 889 aa3.8□□□□□ -1.8
NEK9-208ENST00000555961 A0A1W2PRU2 124 aa3.79□□□□□ -1.8
NEK9-208ENST00000555961 SOCS7O14512 581 aa3.79□□□□□ -1.8
NEK9-208ENST00000555961 ADAMTS2O95450 1211 aa3.79□□□□□ -1.8
NEK9-208ENST00000555961 SLURP2P0DP57 97 aa3.79□□□□□ -1.8
NEK9-208ENST00000555961 ERVK-9P63128 1117 aa3.79□□□□□ -1.8
NEK9-208ENST00000555961 SRSF11Q05519 484 aaKnown RBP3.79□□□□□ -1.8
NEK9-208ENST00000555961 RNFT1Q5M7Z0 435 aa3.79□□□□□ -1.8
NEK9-208ENST00000555961 ZNF385CQ66K41 422 aaPredicted RBP3.79□□□□□ -1.8
NEK9-208ENST00000555961 TRIM22Q8IYM9 498 aa3.79□□□□□ -1.8
NEK9-208ENST00000555961 SCARF2Q96GP6 870 aaPredicted RBP3.79□□□□□ -1.8
NEK9-208ENST00000555961 GJD4Q96KN9 370 aaPredicted RBP3.79□□□□□ -1.8
NEK9-208ENST00000555961 GAS2L1Q99501 681 aaPredicted RBP3.79□□□□□ -1.8
NEK9-208ENST00000555961 SENP3-EIF4A1A0A087X0R7 540 aa3.78□□□□□ -1.8
NEK9-208ENST00000555961 CLN3Q13286 438 aa3.78□□□□□ -1.8
NEK9-208ENST00000555961 KANK3Q6NY19 840 aa3.78□□□□□ -1.8
NEK9-208ENST00000555961 TAS1R3Q7RTX0 852 aa3.78□□□□□ -1.8
NEK9-208ENST00000555961 PODNQ7Z5L7 613 aa3.78□□□□□ -1.8
NEK9-208ENST00000555961 ARHGEF10LQ9HCE6 1279 aa3.78□□□□□ -1.8
NEK9-208ENST00000555961 MBIPQ9NS73 344 aa3.78□□□□□ -1.8
NEK9-208ENST00000555961 DYRK1BQ9Y463 629 aa3.78□□□□□ -1.8
NEK9-208ENST00000555961 PHF20L1A8MW92 1017 aa3.77□□□□□ -1.81
NEK9-208ENST00000555961 IRS1P35568 1242 aa3.77□□□□□ -1.81
NEK9-208ENST00000555961 BRPF1P55201 1214 aaPredicted RBP3.77□□□□□ -1.81
NEK9-208ENST00000555961 EIF4G2P78344 907 aaKnown RBP eCLIP3.77□□□□□ -1.81
NEK9-208ENST00000555961 POU4F2Q12837 409 aa3.77□□□□□ -1.81
NEK9-208ENST00000555961 ESCO1Q5FWF5 840 aa3.77□□□□□ -1.81
NEK9-208ENST00000555961 WDR44Q5JSH3 913 aa3.77□□□□□ -1.81
NEK9-208ENST00000555961 GNASQ5JWF2 1037 aa3.77□□□□□ -1.81
NEK9-208ENST00000555961 KDF1Q8NAX2 398 aaPredicted RBP3.77□□□□□ -1.81
NEK9-208ENST00000555961 ZNF837Q96EG3 531 aaPredicted RBP3.77□□□□□ -1.81
NEK9-208ENST00000555961 TIMMDC1Q9NPL8 285 aa3.77□□□□□ -1.81
NEK9-208ENST00000555961 WASLO00401 505 aaPredicted RBP3.76□□□□□ -1.81
NEK9-208ENST00000555961 GNRH1P01148 92 aa3.76□□□□□ -1.81
NEK9-208ENST00000555961 CSB-PGBD3P0DP91 1061 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms