RNA–Protein interactions for RNA: ENST00000555867.1

PSEN1-214, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 876 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-214ENST00000555867 PLCH1Q4KWH8 1693 aa8.98□□□□□ -0.97
PSEN1-214ENST00000555867 KCNQ2O43526 872 aa8.98□□□□□ -0.97
PSEN1-214ENST00000555867 HSPA5P11021 654 aaKnown RBP8.98□□□□□ -0.97
PSEN1-214ENST00000555867 SPON1Q9HCB6 807 aa8.98□□□□□ -0.97
PSEN1-214ENST00000555867 PPP1R1BQ9UD71 204 aaPredicted RBP8.98□□□□□ -0.97
PSEN1-214ENST00000555867 NINLQ9Y2I6 1382 aa8.98□□□□□ -0.97
PSEN1-214ENST00000555867 SPATA31E1Q6ZUB1 1445 aa8.97□□□□□ -0.97
PSEN1-214ENST00000555867 NWD2Q9ULI1 1742 aa8.97□□□□□ -0.97
PSEN1-214ENST00000555867 KRT28Q7Z3Y7 464 aa8.97□□□□□ -0.97
PSEN1-214ENST00000555867 YTHDC1Q96MU7 727 aaKnown RBP8.97□□□□□ -0.97
PSEN1-214ENST00000555867 VPS9D1Q9Y2B5 631 aa8.97□□□□□ -0.97
PSEN1-214ENST00000555867 TRPM1Q7Z4N2 1603 aa8.97□□□□□ -0.97
PSEN1-214ENST00000555867 NEXMIFQ5QGS0 1516 aa8.96□□□□□ -0.97
PSEN1-214ENST00000555867 CHD4Q14839 1912 aa8.96□□□□□ -0.97
PSEN1-214ENST00000555867 APBA3O96018 575 aa8.96□□□□□ -0.98
PSEN1-214ENST00000555867 HAP1P54257 671 aaPredicted RBP8.96□□□□□ -0.98
PSEN1-214ENST00000555867 ZNF454Q8N9F8 522 aa8.96□□□□□ -0.98
PSEN1-214ENST00000555867 LRPPRCP42704 1394 aaKnown RBP8.96□□□□□ -0.98
PSEN1-214ENST00000555867 WAPLQ7Z5K2 1190 aa8.95□□□□□ -0.98
PSEN1-214ENST00000555867 SLC4A5Q9BY07 1137 aa8.95□□□□□ -0.98
PSEN1-214ENST00000555867 CRISPLD2Q9H0B8 497 aa8.95□□□□□ -0.98
PSEN1-214ENST00000555867 BCL2L12Q9HB09 334 aa8.95□□□□□ -0.98
PSEN1-214ENST00000555867 BTG4Q9NY30 223 aa8.95□□□□□ -0.98
PSEN1-214ENST00000555867 ROCK2O75116 1388 aaKnown RBP8.95□□□□□ -0.98
PSEN1-214ENST00000555867 CCDC7Q96M83 1385 aa8.95□□□□□ -0.98
PSEN1-214ENST00000555867 PRAG1Q86YV5 1406 aa8.95□□□□□ -0.98
PSEN1-214ENST00000555867 CDC42BPGQ6DT37 1551 aa8.95□□□□□ -0.98
PSEN1-214ENST00000555867 NUP188Q5SRE5 1749 aa8.94□□□□□ -0.98
PSEN1-214ENST00000555867 NRAPQ86VF7 1730 aa8.94□□□□□ -0.98
PSEN1-214ENST00000555867 PDGFDQ9GZP0 370 aaPredicted RBP8.94□□□□□ -0.98
PSEN1-214ENST00000555867 SPATA31A5Q5VU36 1347 aa8.94□□□□□ -0.98
PSEN1-214ENST00000555867 SPATA31A7Q8IWB4 1347 aa8.94□□□□□ -0.98
PSEN1-214ENST00000555867 NBPF8Q3BBV2 869 aa8.93□□□□□ -0.98
PSEN1-214ENST00000555867 PPP1R15BQ5SWA1 713 aa8.93□□□□□ -0.98
PSEN1-214ENST00000555867 FAM196AQ6ZSG2 479 aa8.93□□□□□ -0.98
PSEN1-214ENST00000555867 USP47Q96K76 1375 aa8.93□□□□□ -0.98
PSEN1-214ENST00000555867 TNS3Q68CZ2 1445 aa8.93□□□□□ -0.98
PSEN1-214ENST00000555867 RREB1Q92766 1687 aa8.93□□□□□ -0.98
PSEN1-214ENST00000555867 ABCA3Q99758 1704 aa8.92□□□□□ -0.98
PSEN1-214ENST00000555867 THSD7AQ9UPZ6 1657 aa8.92□□□□□ -0.98
PSEN1-214ENST00000555867 PARD3Q8TEW0 1356 aa8.92□□□□□ -0.98
PSEN1-214ENST00000555867 WASHC2AQ641Q2 1341 aa8.92□□□□□ -0.98
PSEN1-214ENST00000555867 NKX1-1Q15270 411 aaPredicted RBP8.92□□□□□ -0.98
PSEN1-214ENST00000555867 NBPF14Q5TI25 921 aa8.92□□□□□ -0.98
PSEN1-214ENST00000555867 LMOD2Q6P5Q4 547 aa8.92□□□□□ -0.98
PSEN1-214ENST00000555867 GTF3C3Q9Y5Q9 886 aa8.92□□□□□ -0.98
PSEN1-214ENST00000555867 KIF1BO60333 1816 aa8.91□□□□□ -0.98
PSEN1-214ENST00000555867 KIAA1210Q9ULL0 1709 aa8.91□□□□□ -0.98
PSEN1-214ENST00000555867 PLEKHH1Q9ULM0 1364 aa8.91□□□□□ -0.98
PSEN1-214ENST00000555867 PTPREP23469 700 aa8.91□□□□□ -0.98
PSEN1-214ENST00000555867 FOSBP53539 338 aa8.91□□□□□ -0.98
PSEN1-214ENST00000555867 PTPN5P54829 565 aa8.91□□□□□ -0.98
PSEN1-214ENST00000555867 RGPD8O14715 1765 aaPredicted RBP8.91□□□□□ -0.98
PSEN1-214ENST00000555867 GPRASP1Q5JY77 1395 aa8.9□□□□□ -0.98
PSEN1-214ENST00000555867 PDE4AP27815 886 aa8.9□□□□□ -0.98
PSEN1-214ENST00000555867 HIRIP3Q9BW71 556 aaPredicted RBP8.9□□□□□ -0.98
PSEN1-214ENST00000555867 CLTCL1P53675 1640 aa8.9□□□□□ -0.99
PSEN1-214ENST00000555867 ADGRB2O60241 1585 aa8.9□□□□□ -0.99
PSEN1-214ENST00000555867 PSME1Q06323 249 aa8.89□□□□□ -0.99
PSEN1-214ENST00000555867 SYT17Q9BSW7 474 aa8.89□□□□□ -0.99
PSEN1-214ENST00000555867 ANO8Q9HCE9 1232 aaPredicted RBP8.89□□□□□ -0.99
PSEN1-214ENST00000555867 STK26Q9P289 416 aa8.89□□□□□ -0.99
PSEN1-214ENST00000555867 NRKQ7Z2Y5 1582 aa8.89□□□□□ -0.99
PSEN1-214ENST00000555867 SBNO1A3KN83 1393 aa8.88□□□□□ -0.99
PSEN1-214ENST00000555867 SPATA31A1Q5TZJ5 1347 aa8.88□□□□□ -0.99
PSEN1-214ENST00000555867 BHMG1C9JSJ3 638 aaPredicted RBP8.88□□□□□ -0.99
PSEN1-214ENST00000555867 ZBTB7AO95365 584 aa8.88□□□□□ -0.99
PSEN1-214ENST00000555867 FMN2Q9NZ56 1722 aa8.88□□□□□ -0.99
PSEN1-214ENST00000555867 KIF1AQ12756 1690 aa8.88□□□□□ -0.99
PSEN1-214ENST00000555867 KTN1Q86UP2 1357 aaKnown RBP8.87□□□□□ -0.99
PSEN1-214ENST00000555867 KIF7Q2M1P5 1343 aa8.87□□□□□ -0.99
PSEN1-214ENST00000555867 GOLGA8CPA6NN73 597 aa8.87□□□□□ -0.99
PSEN1-214ENST00000555867 RGS20O76081 388 aa8.87□□□□□ -0.99
PSEN1-214ENST00000555867 THSD4Q6ZMP0 1018 aa8.87□□□□□ -0.99
PSEN1-214ENST00000555867 ZBED2Q9BTP6 218 aa8.87□□□□□ -0.99
PSEN1-214ENST00000555867 CARD11Q9BXL7 1154 aa8.87□□□□□ -0.99
PSEN1-214ENST00000555867 FHDC1Q9C0D6 1143 aaPredicted RBP8.87□□□□□ -0.99
PSEN1-214ENST00000555867 MYOM1P52179 1685 aa8.87□□□□□ -0.99
PSEN1-214ENST00000555867 ARHGEF10O15013 1369 aa8.86□□□□□ -0.99
PSEN1-214ENST00000555867 CASZ1Q86V15 1759 aa8.86□□□□□ -0.99
PSEN1-214ENST00000555867 IFT172Q9UG01 1749 aa8.86□□□□□ -0.99
PSEN1-214ENST00000555867 GIGYF1O75420 1035 aaPredicted RBP8.86□□□□□ -0.99
PSEN1-214ENST00000555867 MRPL50Q8N5N7 158 aaKnown RBP8.86□□□□□ -0.99
PSEN1-214ENST00000555867 DCAF11Q8TEB1 546 aa8.86□□□□□ -0.99
PSEN1-214ENST00000555867 COL14A1Q05707 1796 aaKnown RBP8.86□□□□□ -0.99
PSEN1-214ENST00000555867 NRXN1Q9ULB1 1477 aa8.85□□□□□ -0.99
PSEN1-214ENST00000555867 EVI5O60447 810 aa8.85□□□□□ -0.99
PSEN1-214ENST00000555867 TMEM132EQ6IEE7 984 aa8.85□□□□□ -0.99
PSEN1-214ENST00000555867 PMFBP1Q8TBY8 1022 aa8.85□□□□□ -0.99
PSEN1-214ENST00000555867 ZDHHC16Q969W1 377 aa8.85□□□□□ -0.99
PSEN1-214ENST00000555867 NBPF3Q9H094 633 aa8.85□□□□□ -0.99
PSEN1-214ENST00000555867 TECPR2O15040 1411 aa8.85□□□□□ -0.99
PSEN1-214ENST00000555867 ADGRF5Q8IZF2 1346 aa8.84□□□□□ -0.99
PSEN1-214ENST00000555867 CHRNA2Q15822 529 aa8.84□□□□□ -0.99
PSEN1-214ENST00000555867 PTF1AQ7RTS3 328 aa8.84□□□□□ -0.99
PSEN1-214ENST00000555867 WNT2BQ93097 391 aa8.84□□□□□ -0.99
PSEN1-214ENST00000555867 USP35Q9P2H5 1018 aa8.84□□□□□ -0.99
PSEN1-214ENST00000555867 ABCC11Q96J66 1382 aa8.84□□□□□ -0.99
PSEN1-214ENST00000555867 RPGRIP1LQ68CZ1 1315 aa8.83□□□□□ -1
PSEN1-214ENST00000555867 PDE3BQ13370 1112 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms