RNA–Protein interactions for RNA: ENST00000555451.1

XRCC3-213, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 409 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-213ENST00000555451 IL16Q14005 1332 aa14.55□□□□□ -0.08
XRCC3-213ENST00000555451 SRCAPQ6ZRS2 3230 aa14.55□□□□□ -0.08
XRCC3-213ENST00000555451 NEFLP07196 543 aa14.54□□□□□ -0.08
XRCC3-213ENST00000555451 CALD1Q05682 793 aaKnown RBP14.54□□□□□ -0.08
XRCC3-213ENST00000555451 SUPT16HQ9Y5B9 1047 aaKnown RBP14.54□□□□□ -0.08
XRCC3-213ENST00000555451 ERBB3P21860 1342 aa14.54□□□□□ -0.08
XRCC3-213ENST00000555451 PLCH1Q4KWH8 1693 aa14.54□□□□□ -0.08
XRCC3-213ENST00000555451 VPS72Q15906 364 aa14.53□□□□□ -0.08
XRCC3-213ENST00000555451 GAS2L2Q8NHY3 880 aa14.53□□□□□ -0.08
XRCC3-213ENST00000555451 UPF1Q92900 1129 aaKnown RBP eCLIP14.53□□□□□ -0.08
XRCC3-213ENST00000555451 GJD4Q96KN9 370 aaPredicted RBP14.53□□□□□ -0.08
XRCC3-213ENST00000555451 MYH16Q9H6N6 1097 aa14.53□□□□□ -0.08
XRCC3-213ENST00000555451 BTG4Q9NY30 223 aa14.53□□□□□ -0.08
XRCC3-213ENST00000555451 AXIN2Q9Y2T1 843 aa14.53□□□□□ -0.08
XRCC3-213ENST00000555451 CHRNA2Q15822 529 aa14.52□□□□□ -0.09
XRCC3-213ENST00000555451 NBPF6Q5VWK0 638 aa14.52□□□□□ -0.09
XRCC3-213ENST00000555451 NBPF4Q96M43 638 aa14.52□□□□□ -0.09
XRCC3-213ENST00000555451 SPINK5Q9NQ38 1064 aaPredicted RBP14.52□□□□□ -0.09
XRCC3-213ENST00000555451 RCAN3Q9UKA8 241 aa14.52□□□□□ -0.09
XRCC3-213ENST00000555451 PLEKHG2Q9H7P9 1386 aa14.51□□□□□ -0.09
XRCC3-213ENST00000555451 NRAPQ86VF7 1730 aa14.51□□□□□ -0.09
XRCC3-213ENST00000555451 RNF123Q5XPI4 1314 aa14.5□□□□□ -0.09
XRCC3-213ENST00000555451 RGS12O14924 1447 aa14.49□□□□□ -0.09
XRCC3-213ENST00000555451 GLI3P10071 1580 aa14.49□□□□□ -0.09
XRCC3-213ENST00000555451 USHBP1Q8N6Y0 703 aa14.49□□□□□ -0.09
XRCC3-213ENST00000555451 HTATSF1O43719 755 aaKnown RBP14.48□□□□□ -0.09
XRCC3-213ENST00000555451 ONECUT3O60422 494 aaPredicted RBP14.48□□□□□ -0.09
XRCC3-213ENST00000555451 MTHFSDQ2M296 383 aaKnown RBP14.48□□□□□ -0.09
XRCC3-213ENST00000555451 COL5A2P05997 1499 aaPredicted RBP14.47□□□□□ -0.09
XRCC3-213ENST00000555451 CSB-PGBD3P0DP91 1061 aa14.47□□□□□ -0.09
XRCC3-213ENST00000555451 AMOTQ4VCS5 1084 aa14.47□□□□□ -0.09
XRCC3-213ENST00000555451 IFT57Q9NWB7 429 aa14.47□□□□□ -0.09
XRCC3-213ENST00000555451 LRRC37A3O60309 1634 aa14.47□□□□□ -0.09
XRCC3-213ENST00000555451 SPATA31A5Q5VU36 1347 aa14.46□□□□□ -0.09
XRCC3-213ENST00000555451 SPATA31A7Q8IWB4 1347 aa14.46□□□□□ -0.09
XRCC3-213ENST00000555451 FANCIQ9NVI1 1328 aa14.46□□□□□ -0.09
XRCC3-213ENST00000555451 CT47B1P0C2W7 299 aaPredicted RBP14.46□□□□□ -0.09
XRCC3-213ENST00000555451 GNAI1P63096 354 aa14.46□□□□□ -0.09
XRCC3-213ENST00000555451 RTF1Q92541 710 aaKnown RBP14.46□□□□□ -0.09
XRCC3-213ENST00000555451 CCDC9Q9Y3X0 531 aaKnown RBP14.46□□□□□ -0.09
XRCC3-213ENST00000555451 MAP3K5Q99683 1374 aa14.46□□□□□ -0.1
XRCC3-213ENST00000555451 WDR17Q8IZU2 1322 aa14.45□□□□□ -0.1
XRCC3-213ENST00000555451 EVA1CP58658 441 aa14.45□□□□□ -0.1
XRCC3-213ENST00000555451 PLEKHO1Q53GL0 409 aaPredicted RBP14.45□□□□□ -0.1
XRCC3-213ENST00000555451 NLRP2Q9NX02 1062 aa14.45□□□□□ -0.1
XRCC3-213ENST00000555451 SPATA31A1Q5TZJ5 1347 aa14.44□□□□□ -0.1
XRCC3-213ENST00000555451 GNAT3A8MTJ3 354 aa14.44□□□□□ -0.1
XRCC3-213ENST00000555451 RRP1P56182 461 aaKnown RBP14.44□□□□□ -0.1
XRCC3-213ENST00000555451 FKBP8Q14318 412 aa14.44□□□□□ -0.1
XRCC3-213ENST00000555451 STRN4Q9NRL3 753 aa14.44□□□□□ -0.1
XRCC3-213ENST00000555451 PARP4Q9UKK3 1724 aaKnown RBP14.44□□□□□ -0.1
XRCC3-213ENST00000555451 ZNF853P0CG23 659 aa14.43□□□□□ -0.1
XRCC3-213ENST00000555451 ERICH6BQ5W0A0 696 aa14.43□□□□□ -0.1
XRCC3-213ENST00000555451 RAPGEF4Q8WZA2 1011 aa14.43□□□□□ -0.1
XRCC3-213ENST00000555451 CFAP44Q96MT7 982 aa14.43□□□□□ -0.1
XRCC3-213ENST00000555451 THUMPD2Q9BTF0 503 aaKnown RBP14.43□□□□□ -0.1
XRCC3-213ENST00000555451 PKD1L3Q7Z443 1732 aa14.43□□□□□ -0.1
XRCC3-213ENST00000555451 TATP17735 454 aaPredicted RBP14.42□□□□□ -0.1
XRCC3-213ENST00000555451 LARP1Q6PKG0 1096 aaKnown RBP14.42□□□□□ -0.1
XRCC3-213ENST00000555451 TSR2Q969E8 191 aaKnown RBP14.42□□□□□ -0.1
XRCC3-213ENST00000555451 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.42□□□□□ -0.1
XRCC3-213ENST00000555451 OVOS2A0A0G2JMS6 1433 aa14.41□□□□□ -0.1
XRCC3-213ENST00000555451 CRB1P82279 1406 aa14.41□□□□□ -0.1
XRCC3-213ENST00000555451 DCTN1Q14203 1278 aa14.41□□□□□ -0.1
XRCC3-213ENST00000555451 FAM98CQ17RN3 349 aaKnown RBP14.41□□□□□ -0.1
XRCC3-213ENST00000555451 AKAP4Q5JQC9 854 aa14.41□□□□□ -0.1
XRCC3-213ENST00000555451 TOM1L2Q6ZVM7 507 aa14.41□□□□□ -0.1
XRCC3-213ENST00000555451 MCM10Q7L590 875 aa14.41□□□□□ -0.1
XRCC3-213ENST00000555451 SEPT12Q8IYM1 358 aa14.41□□□□□ -0.1
XRCC3-213ENST00000555451 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.41□□□□□ -0.1
XRCC3-213ENST00000555451 CARD10Q9BWT7 1032 aa14.41□□□□□ -0.1
XRCC3-213ENST00000555451 MEGF6O75095 1541 aa14.41□□□□□ -0.1
XRCC3-213ENST00000555451 EXOSC9Q06265 439 aaKnown RBP14.4□□□□□ -0.1
XRCC3-213ENST00000555451 C1orf141Q5JVX7 400 aa14.4□□□□□ -0.1
XRCC3-213ENST00000555451 ZNF530Q6P9A1 599 aaPredicted RBP14.4□□□□□ -0.1
XRCC3-213ENST00000555451 BARGINQ6ZT62 677 aa14.4□□□□□ -0.1
XRCC3-213ENST00000555451 THRAP3Q9Y2W1 955 aaKnown RBP14.4□□□□□ -0.1
XRCC3-213ENST00000555451 LAS1LQ9Y4W2 734 aaKnown RBP14.4□□□□□ -0.1
XRCC3-213ENST00000555451 ADAMTS7Q9UKP4 1686 aa14.39□□□□□ -0.11
XRCC3-213ENST00000555451 VIRMAQ69YN4 1812 aaKnown RBP14.39□□□□□ -0.11
XRCC3-213ENST00000555451 MBIPQ9NS73 344 aa14.39□□□□□ -0.11
XRCC3-213ENST00000555451 SPG7Q9UQ90 795 aa14.39□□□□□ -0.11
XRCC3-213ENST00000555451 CEMIPQ8WUJ3 1361 aa14.38□□□□□ -0.11
XRCC3-213ENST00000555451 CHL1O00533 1208 aa14.38□□□□□ -0.11
XRCC3-213ENST00000555451 ZNF428Q96B54 188 aa14.38□□□□□ -0.11
XRCC3-213ENST00000555451 BABAM1Q9NWV8 329 aa14.38□□□□□ -0.11
XRCC3-213ENST00000555451 THSD7AQ9UPZ6 1657 aa14.38□□□□□ -0.11
XRCC3-213ENST00000555451 RARSP54136 660 aaKnown RBP14.37□□□□□ -0.11
XRCC3-213ENST00000555451 IL17REQ8NFR9 667 aa14.37□□□□□ -0.11
XRCC3-213ENST00000555451 USP35Q9P2H5 1018 aa14.36□□□□□ -0.11
XRCC3-213ENST00000555451 SCN11AQ9UI33 1791 aa14.35□□□□□ -0.11
XRCC3-213ENST00000555451 IL2RBP14784 551 aa14.35□□□□□ -0.11
XRCC3-213ENST00000555451 IRX6P78412 446 aaPredicted RBP14.35□□□□□ -0.11
XRCC3-213ENST00000555451 KRT27Q7Z3Y8 459 aa14.35□□□□□ -0.11
XRCC3-213ENST00000555451 BRWD3Q6RI45 1802 aa14.35□□□□□ -0.11
XRCC3-213ENST00000555451 WNK3Q9BYP7 1800 aa14.34□□□□□ -0.11
XRCC3-213ENST00000555451 A0A0G2JS52 829 aa14.34□□□□□ -0.11
XRCC3-213ENST00000555451 RNMTO43148 476 aaKnown RBP14.34□□□□□ -0.11
XRCC3-213ENST00000555451 HSP90AB1P08238 724 aaKnown RBP14.34□□□□□ -0.11
XRCC3-213ENST00000555451 MYT1Q01538 1121 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms