RNA–Protein interactions for RNA: ENST00000555305.5

IFT43-209, Transcript of intraflagellar transport 43, humanhuman

TSL 2

Gene IFT43, Length 1,765 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-209ENST00000555305 NOB1Q9ULX3 412 aaKnown RBP18.53■□□□□ 0.56
IFT43-209ENST00000555305 SOS1Q07889 1333 aaPredicted RBP18.53■□□□□ 0.56
IFT43-209ENST00000555305 CRB1P82279 1406 aa18.53■□□□□ 0.56
IFT43-209ENST00000555305 ABCC6O95255 1503 aa18.53■□□□□ 0.56
IFT43-209ENST00000555305 MAP3K5Q99683 1374 aa18.52■□□□□ 0.56
IFT43-209ENST00000555305 XPCQ01831 940 aaPredicted RBP18.52■□□□□ 0.55
IFT43-209ENST00000555305 PLEKHG2Q9H7P9 1386 aa18.52■□□□□ 0.55
IFT43-209ENST00000555305 TNS3Q68CZ2 1445 aa18.52■□□□□ 0.55
IFT43-209ENST00000555305 DCTN1Q14203 1278 aa18.51■□□□□ 0.55
IFT43-209ENST00000555305 MCM10Q7L590 875 aa18.51■□□□□ 0.55
IFT43-209ENST00000555305 LTV1Q96GA3 475 aaPredicted RBP18.51■□□□□ 0.55
IFT43-209ENST00000555305 NCAPD2Q15021 1401 aa18.51■□□□□ 0.55
IFT43-209ENST00000555305 RLBP1P12271 317 aa18.5■□□□□ 0.55
IFT43-209ENST00000555305 AMOTQ4VCS5 1084 aa18.5■□□□□ 0.55
IFT43-209ENST00000555305 MRPL50Q8N5N7 158 aaKnown RBP18.5■□□□□ 0.55
IFT43-209ENST00000555305 API5Q9BZZ5 524 aaKnown RBP18.49■□□□□ 0.55
IFT43-209ENST00000555305 RWDD1Q9H446 243 aaPredicted RBP18.49■□□□□ 0.55
IFT43-209ENST00000555305 CHMP4AQ9BY43 222 aa18.48■□□□□ 0.55
IFT43-209ENST00000555305 LRRC37A3O60309 1634 aa18.48■□□□□ 0.55
IFT43-209ENST00000555305 PXDNQ92626 1479 aa18.48■□□□□ 0.55
IFT43-209ENST00000555305 PLEKHO1Q53GL0 409 aaPredicted RBP18.47■□□□□ 0.55
IFT43-209ENST00000555305 NBPF6Q5VWK0 638 aa18.47■□□□□ 0.55
IFT43-209ENST00000555305 C8orf58Q8NAV2 365 aa18.47■□□□□ 0.55
IFT43-209ENST00000555305 NBPF4Q96M43 638 aa18.47■□□□□ 0.55
IFT43-209ENST00000555305 MED1Q15648 1581 aaPredicted RBP18.47■□□□□ 0.55
IFT43-209ENST00000555305 ITPRIPQ8IWB1 547 aa18.47■□□□□ 0.55
IFT43-209ENST00000555305 TSPYL6Q8N831 410 aa18.47■□□□□ 0.55
IFT43-209ENST00000555305 ANKRD24Q8TF21 1146 aa18.47■□□□□ 0.55
IFT43-209ENST00000555305 TSPYL4Q9UJ04 414 aa18.47■□□□□ 0.55
IFT43-209ENST00000555305 SPATA31A3Q5VYP0 1347 aa18.46■□□□□ 0.55
IFT43-209ENST00000555305 CAMTA1Q9Y6Y1 1673 aa18.45■□□□□ 0.54
IFT43-209ENST00000555305 ZBTB7CA1YPR0 619 aa18.45■□□□□ 0.54
IFT43-209ENST00000555305 SLAIN2Q9P270 581 aa18.45■□□□□ 0.54
IFT43-209ENST00000555305 OVOS2A0A0G2JMS6 1433 aa18.45■□□□□ 0.54
IFT43-209ENST00000555305 XIRP1Q702N8 1843 aaKnown RBP18.44■□□□□ 0.54
IFT43-209ENST00000555305 PTPRCP08575 1304 aa18.44■□□□□ 0.54
IFT43-209ENST00000555305 BRINP3Q76B58 766 aa18.44■□□□□ 0.54
IFT43-209ENST00000555305 CPDO75976 1380 aa18.44■□□□□ 0.54
IFT43-209ENST00000555305 ZNF335Q9H4Z2 1342 aaPredicted RBP18.43■□□□□ 0.54
IFT43-209ENST00000555305 TAF7Q15545 349 aaPredicted RBP18.43■□□□□ 0.54
IFT43-209ENST00000555305 AKAP4Q5JQC9 854 aa18.43■□□□□ 0.54
IFT43-209ENST00000555305 ABCC4O15439 1325 aa18.43■□□□□ 0.54
IFT43-209ENST00000555305 ERBB3P21860 1342 aa18.43■□□□□ 0.54
IFT43-209ENST00000555305 TMEM57Q8N5G2 664 aa18.42■□□□□ 0.54
IFT43-209ENST00000555305 TNNQ9UQP3 1299 aa18.42■□□□□ 0.54
IFT43-209ENST00000555305 CEMIPQ8WUJ3 1361 aa18.42■□□□□ 0.54
IFT43-209ENST00000555305 ELL2O00472 640 aaPredicted RBP18.42■□□□□ 0.54
IFT43-209ENST00000555305 HDAC1Q13547 482 aaPredicted RBP18.42■□□□□ 0.54
IFT43-209ENST00000555305 ZBTB40Q9NUA8 1239 aa18.41■□□□□ 0.54
IFT43-209ENST00000555305 SOS2Q07890 1332 aaPredicted RBP18.41■□□□□ 0.54
IFT43-209ENST00000555305 IGHDP01880 384 aa18.4■□□□□ 0.54
IFT43-209ENST00000555305 C1orf141Q5JVX7 400 aa18.4■□□□□ 0.54
IFT43-209ENST00000555305 USHBP1Q8N6Y0 703 aa18.4■□□□□ 0.54
IFT43-209ENST00000555305 FAM208AQ9UK61 1670 aaKnown RBP18.4■□□□□ 0.54
IFT43-209ENST00000555305 IL17REQ8NFR9 667 aa18.4■□□□□ 0.54
IFT43-209ENST00000555305 PCDHB15Q9Y5E8 787 aa18.4■□□□□ 0.54
IFT43-209ENST00000555305 LMO7Q8WWI1 1683 aa18.39■□□□□ 0.53
IFT43-209ENST00000555305 ZC3H6P61129 1189 aaKnown RBP18.38■□□□□ 0.53
IFT43-209ENST00000555305 ZNF530Q6P9A1 599 aaPredicted RBP18.38■□□□□ 0.53
IFT43-209ENST00000555305 LRRC59Q96AG4 307 aaKnown RBP18.38■□□□□ 0.53
IFT43-209ENST00000555305 STK31Q9BXU1 1019 aa18.38■□□□□ 0.53
IFT43-209ENST00000555305 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.38■□□□□ 0.53
IFT43-209ENST00000555305 HOXB7P09629 217 aa18.37■□□□□ 0.53
IFT43-209ENST00000555305 CCDC30Q5VVM6 783 aa18.37■□□□□ 0.53
IFT43-209ENST00000555305 AXIN2Q9Y2T1 843 aa18.37■□□□□ 0.53
IFT43-209ENST00000555305 RAPGEF4Q8WZA2 1011 aa18.37■□□□□ 0.53
IFT43-209ENST00000555305 PDE4AP27815 886 aa18.36■□□□□ 0.53
IFT43-209ENST00000555305 DDX17Q92841 729 aaKnown RBP18.36■□□□□ 0.53
IFT43-209ENST00000555305 BACH2Q9BYV9 841 aa18.36■□□□□ 0.53
IFT43-209ENST00000555305 CRYBG1Q9Y4K1 1723 aa18.35■□□□□ 0.53
IFT43-209ENST00000555305 ZBTB7BO15156 539 aaPredicted RBP18.35■□□□□ 0.53
IFT43-209ENST00000555305 TEFQ10587 303 aa18.35■□□□□ 0.53
IFT43-209ENST00000555305 INTS3Q68E01 1043 aaKnown RBP18.35■□□□□ 0.53
IFT43-209ENST00000555305 MIS18AQ9NYP9 233 aa18.34■□□□□ 0.53
IFT43-209ENST00000555305 SPG7Q9UQ90 795 aa18.34■□□□□ 0.53
IFT43-209ENST00000555305 COL18A1P39060 1754 aa18.33■□□□□ 0.53
IFT43-209ENST00000555305 SLC4A2P04920 1241 aa18.33■□□□□ 0.53
IFT43-209ENST00000555305 TATP17735 454 aaPredicted RBP18.33■□□□□ 0.53
IFT43-209ENST00000555305 NLRP2Q9NX02 1062 aa18.33■□□□□ 0.53
IFT43-209ENST00000555305 CSB-PGBD3P0DP91 1061 aa18.32■□□□□ 0.52
IFT43-209ENST00000555305 FAM161AQ3B820 660 aa18.32■□□□□ 0.52
IFT43-209ENST00000555305 PLEKHG5O94827 1062 aa18.32■□□□□ 0.52
IFT43-209ENST00000555305 KRT24Q2M2I5 525 aa18.32■□□□□ 0.52
IFT43-209ENST00000555305 RGPD2P0DJD1 1756 aa18.31■□□□□ 0.52
IFT43-209ENST00000555305 RNMTO43148 476 aaKnown RBP18.31■□□□□ 0.52
IFT43-209ENST00000555305 ANP32AP39687 249 aaKnown RBP18.31■□□□□ 0.52
IFT43-209ENST00000555305 CCT4P50991 539 aaKnown RBP18.3■□□□□ 0.52
IFT43-209ENST00000555305 SMC5Q8IY18 1101 aa18.3■□□□□ 0.52
IFT43-209ENST00000555305 GCC1Q96CN9 775 aa18.3■□□□□ 0.52
IFT43-209ENST00000555305 RGS3P49796 1198 aa18.3■□□□□ 0.52
IFT43-209ENST00000555305 NHSL1Q5SYE7 1610 aa18.29■□□□□ 0.52
IFT43-209ENST00000555305 BTBD11A6QL63 1104 aa18.29■□□□□ 0.52
IFT43-209ENST00000555305 HSP90AB1P08238 724 aaKnown RBP18.29■□□□□ 0.52
IFT43-209ENST00000555305 CABLES1Q8TDN4 633 aa18.29■□□□□ 0.52
IFT43-209ENST00000555305 RGS12O14924 1447 aa18.28■□□□□ 0.52
IFT43-209ENST00000555305 PRDM11Q9NQV5 511 aa18.28■□□□□ 0.52
IFT43-209ENST00000555305 ADAMTS7Q9UKP4 1686 aa18.28■□□□□ 0.52
IFT43-209ENST00000555305 EIF4A1P60842 406 aaKnown RBP18.27■□□□□ 0.52
IFT43-209ENST00000555305 LGR6Q9HBX8 967 aa18.27■□□□□ 0.52
IFT43-209ENST00000555305 PDZRN3Q9UPQ7 1066 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms