RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 HSP90AB2PQ58FF8 381 aa14.32□□□□□ -0.12
TMEM260-206ENST00000555046 EMILIN1Q9Y6C2 1016 aa14.32□□□□□ -0.12
TMEM260-206ENST00000555046 INSRP06213 1382 aa14.32□□□□□ -0.12
TMEM260-206ENST00000555046 SMG6Q86US8 1419 aaKnown RBP14.32□□□□□ -0.12
TMEM260-206ENST00000555046 EXOC5O00471 708 aa14.31□□□□□ -0.12
TMEM260-206ENST00000555046 PRELPP51888 382 aa14.31□□□□□ -0.12
TMEM260-206ENST00000555046 PHRF1Q9P1Y6 1649 aaKnown RBP14.3□□□□□ -0.12
TMEM260-206ENST00000555046 IL2RBP14784 551 aa14.3□□□□□ -0.12
TMEM260-206ENST00000555046 PDGFDQ9GZP0 370 aaPredicted RBP14.3□□□□□ -0.12
TMEM260-206ENST00000555046 MTHFSP49914 203 aa14.29□□□□□ -0.12
TMEM260-206ENST00000555046 DDB1Q16531 1140 aa14.29□□□□□ -0.12
TMEM260-206ENST00000555046 COL13A1Q5TAT6 717 aaPredicted RBP14.29□□□□□ -0.12
TMEM260-206ENST00000555046 ANO8Q9HCE9 1232 aaPredicted RBP14.29□□□□□ -0.12
TMEM260-206ENST00000555046 PCDH10Q9P2E7 1040 aa14.29□□□□□ -0.12
TMEM260-206ENST00000555046 ZBTB7AO95365 584 aa14.28□□□□□ -0.12
TMEM260-206ENST00000555046 PCNTO95613 3336 aa14.28□□□□□ -0.12
TMEM260-206ENST00000555046 CNGB1Q14028 1251 aaPredicted RBP14.28□□□□□ -0.12
TMEM260-206ENST00000555046 RALBP1Q15311 655 aa14.28□□□□□ -0.12
TMEM260-206ENST00000555046 FAM196AQ6ZSG2 479 aa14.28□□□□□ -0.12
TMEM260-206ENST00000555046 USP54Q70EL1 1684 aa14.28□□□□□ -0.12
TMEM260-206ENST00000555046 RAPGEF4Q8WZA2 1011 aa14.28□□□□□ -0.12
TMEM260-206ENST00000555046 CFAP53Q96M91 514 aa14.28□□□□□ -0.12
TMEM260-206ENST00000555046 CRYBG1Q9Y4K1 1723 aa14.28□□□□□ -0.12
TMEM260-206ENST00000555046 NBPF6Q5VWK0 638 aa14.27□□□□□ -0.13
TMEM260-206ENST00000555046 NBPF4Q96M43 638 aa14.27□□□□□ -0.13
TMEM260-206ENST00000555046 TATP17735 454 aaPredicted RBP14.25□□□□□ -0.13
TMEM260-206ENST00000555046 LMO7Q8WWI1 1683 aa14.24□□□□□ -0.13
TMEM260-206ENST00000555046 DIAPH1O60610 1272 aaKnown RBP14.24□□□□□ -0.13
TMEM260-206ENST00000555046 EIF4A2Q14240 407 aaKnown RBP14.24□□□□□ -0.13
TMEM260-206ENST00000555046 EYA1Q99502 592 aa14.24□□□□□ -0.13
TMEM260-206ENST00000555046 NUDCQ9Y266 331 aa14.24□□□□□ -0.13
TMEM260-206ENST00000555046 MAP3K5Q99683 1374 aa14.23□□□□□ -0.13
TMEM260-206ENST00000555046 ATP10DQ9P241 1426 aa14.23□□□□□ -0.13
TMEM260-206ENST00000555046 PPP2R1AP30153 589 aa14.22□□□□□ -0.13
TMEM260-206ENST00000555046 ZCRB1Q8TBF4 217 aaKnown RBP14.22□□□□□ -0.13
TMEM260-206ENST00000555046 ATF5Q9Y2D1 282 aaPredicted RBP14.22□□□□□ -0.13
TMEM260-206ENST00000555046 COL18A1P39060 1754 aa14.22□□□□□ -0.13
TMEM260-206ENST00000555046 SBF2Q86WG5 1849 aa14.21□□□□□ -0.13
TMEM260-206ENST00000555046 IL13P35225 146 aa14.21□□□□□ -0.13
TMEM260-206ENST00000555046 SGIP1Q9BQI5 828 aa14.21□□□□□ -0.13
TMEM260-206ENST00000555046 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.21□□□□□ -0.13
TMEM260-206ENST00000555046 SPG7Q9UQ90 795 aa14.21□□□□□ -0.13
TMEM260-206ENST00000555046 TNS4Q8IZW8 715 aa14.2□□□□□ -0.14
TMEM260-206ENST00000555046 KIF20BQ96Q89 1820 aa14.2□□□□□ -0.14
TMEM260-206ENST00000555046 GPR162Q16538 588 aa14.19□□□□□ -0.14
TMEM260-206ENST00000555046 AMOTQ4VCS5 1084 aa14.19□□□□□ -0.14
TMEM260-206ENST00000555046 PLEKHO1Q53GL0 409 aaPredicted RBP14.19□□□□□ -0.14
TMEM260-206ENST00000555046 USHBP1Q8N6Y0 703 aa14.19□□□□□ -0.14
TMEM260-206ENST00000555046 DDX54Q8TDD1 881 aaKnown RBP14.18□□□□□ -0.14
TMEM260-206ENST00000555046 IGSF1Q8N6C5 1336 aa14.17□□□□□ -0.14
TMEM260-206ENST00000555046 SULT6B1Q6IMI4 303 aa14.17□□□□□ -0.14
TMEM260-206ENST00000555046 MARCH10Q8NA82 808 aaPredicted RBP14.17□□□□□ -0.14
TMEM260-206ENST00000555046 PNNQ9H307 717 aaKnown RBP14.17□□□□□ -0.14
TMEM260-206ENST00000555046 PEAK1Q9H792 1746 aa14.17□□□□□ -0.14
TMEM260-206ENST00000555046 PLEKHG2Q9H7P9 1386 aa14.17□□□□□ -0.14
TMEM260-206ENST00000555046 OVOS2A0A0G2JMS6 1433 aa14.16□□□□□ -0.14
TMEM260-206ENST00000555046 U2SURPO15042 1029 aaKnown RBP14.16□□□□□ -0.14
TMEM260-206ENST00000555046 ANP32CO43423 234 aa14.16□□□□□ -0.14
TMEM260-206ENST00000555046 DNAJC5GQ8N7S2 189 aa14.15□□□□□ -0.14
TMEM260-206ENST00000555046 WDR90Q96KV7 1748 aa14.15□□□□□ -0.14
TMEM260-206ENST00000555046 MYBBP1AQ9BQG0 1328 aaKnown RBP14.15□□□□□ -0.15
TMEM260-206ENST00000555046 PCDH11XQ9BZA7 1347 aa14.15□□□□□ -0.15
TMEM260-206ENST00000555046 PCDH11YQ9BZA8 1340 aa14.15□□□□□ -0.15
TMEM260-206ENST00000555046 NEFMP07197 916 aa14.14□□□□□ -0.15
TMEM260-206ENST00000555046 HSP90AB1P08238 724 aaKnown RBP14.14□□□□□ -0.15
TMEM260-206ENST00000555046 HMGB2P26583 209 aaKnown RBP14.14□□□□□ -0.15
TMEM260-206ENST00000555046 IFNL2Q8IZJ0 200 aa14.14□□□□□ -0.15
TMEM260-206ENST00000555046 BCL11BQ9C0K0 894 aaPredicted RBP14.14□□□□□ -0.15
TMEM260-206ENST00000555046 RNF39Q9H2S5 420 aa14.14□□□□□ -0.15
TMEM260-206ENST00000555046 PRKRIP1Q9H875 184 aaPredicted RBP14.14□□□□□ -0.15
TMEM260-206ENST00000555046 BCL9O00512 1426 aa14.14□□□□□ -0.15
TMEM260-206ENST00000555046 LTN1O94822 1766 aa14.14□□□□□ -0.15
TMEM260-206ENST00000555046 FCHSD2O94868 740 aa14.13□□□□□ -0.15
TMEM260-206ENST00000555046 U2AF1L5P0DN76 240 aaPredicted RBP14.13□□□□□ -0.15
TMEM260-206ENST00000555046 U2AF1Q01081 240 aaKnown RBP eCLIP14.13□□□□□ -0.15
TMEM260-206ENST00000555046 PARP4Q9UKK3 1724 aaKnown RBP14.12□□□□□ -0.15
TMEM260-206ENST00000555046 ADCY9O60503 1353 aa14.12□□□□□ -0.15
TMEM260-206ENST00000555046 C1orf141Q5JVX7 400 aa14.12□□□□□ -0.15
TMEM260-206ENST00000555046 ARXQ96QS3 562 aa14.12□□□□□ -0.15
TMEM260-206ENST00000555046 MTFR1LQ9H019 292 aa14.12□□□□□ -0.15
TMEM260-206ENST00000555046 GPBP1L1Q9HC44 474 aaPredicted RBP14.12□□□□□ -0.15
TMEM260-206ENST00000555046 TNS2Q63HR2 1409 aa14.12□□□□□ -0.15
TMEM260-206ENST00000555046 ANKRD26Q9UPS8 1709 aa14.12□□□□□ -0.15
TMEM260-206ENST00000555046 HMOX1P09601 288 aa14.11□□□□□ -0.15
TMEM260-206ENST00000555046 NKX1-1Q15270 411 aaPredicted RBP14.11□□□□□ -0.15
TMEM260-206ENST00000555046 MAP2P11137 1827 aaKnown RBP14.11□□□□□ -0.15
TMEM260-206ENST00000555046 NCAPD2Q15021 1401 aa14.1□□□□□ -0.15
TMEM260-206ENST00000555046 APLP1P51693 650 aa14.1□□□□□ -0.15
TMEM260-206ENST00000555046 PELP1Q8IZL8 1130 aaKnown RBP14.1□□□□□ -0.15
TMEM260-206ENST00000555046 KDRP35968 1356 aa14.09□□□□□ -0.15
TMEM260-206ENST00000555046 PLSCR1O15162 318 aa14.09□□□□□ -0.15
TMEM260-206ENST00000555046 AEBP1Q8IUX7 1158 aa14.09□□□□□ -0.15
TMEM260-206ENST00000555046 DCAF5Q96JK2 942 aa14.09□□□□□ -0.15
TMEM260-206ENST00000555046 COL24A1Q17RW2 1714 aa14.09□□□□□ -0.15
TMEM260-206ENST00000555046 FAM208AQ9UK61 1670 aaKnown RBP14.08□□□□□ -0.16
TMEM260-206ENST00000555046 CYP27B1O15528 508 aa14.08□□□□□ -0.16
TMEM260-206ENST00000555046 PHKG2P15735 406 aa14.08□□□□□ -0.16
TMEM260-206ENST00000555046 PRIM1P49642 420 aaKnown RBP14.08□□□□□ -0.16
TMEM260-206ENST00000555046 ZNF530Q6P9A1 599 aaPredicted RBP14.08□□□□□ -0.16
TMEM260-206ENST00000555046 GAS2L2Q8NHY3 880 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms