RNA–Protein interactions for RNA: ENST00000554306.1

KTN1-213, Transcript of kinectin 1, humanhuman

TSL 3

Gene KTN1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-213ENST00000554306 TRIM47Q96LD4 638 aa10.21□□□□□ -0.77
KTN1-213ENST00000554306 CDK15Q96Q40 435 aa10.21□□□□□ -0.77
KTN1-213ENST00000554306 ADH1CP00326 375 aa10.2□□□□□ -0.78
KTN1-213ENST00000554306 NCOA2Q15596 1464 aa10.19□□□□□ -0.78
KTN1-213ENST00000554306 PRKCSHP14314 528 aaPredicted RBP10.19□□□□□ -0.78
KTN1-213ENST00000554306 PROCA1Q8NCQ7 364 aaPredicted RBP10.19□□□□□ -0.78
KTN1-213ENST00000554306 MYO5CQ9NQX4 1742 aa10.19□□□□□ -0.78
KTN1-213ENST00000554306 ITSN2Q9NZM3 1697 aa10.18□□□□□ -0.78
KTN1-213ENST00000554306 CCNB3Q8WWL7 1395 aa10.18□□□□□ -0.78
KTN1-213ENST00000554306 ARID5BQ14865 1188 aa10.18□□□□□ -0.78
KTN1-213ENST00000554306 C4orf48Q5BLP8 95 aa10.18□□□□□ -0.78
KTN1-213ENST00000554306 SH3RF1Q7Z6J0 888 aa10.18□□□□□ -0.78
KTN1-213ENST00000554306 CDC42BPAQ5VT25 1732 aa10.17□□□□□ -0.78
KTN1-213ENST00000554306 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.17□□□□□ -0.78
KTN1-213ENST00000554306 ABCA9Q8IUA7 1624 aa10.16□□□□□ -0.78
KTN1-213ENST00000554306 NR5A1Q13285 461 aa10.16□□□□□ -0.78
KTN1-213ENST00000554306 SH3BP5LQ7L8J4 393 aa10.16□□□□□ -0.78
KTN1-213ENST00000554306 GOPCQ9HD26 462 aa10.16□□□□□ -0.78
KTN1-213ENST00000554306 GLI2P10070 1586 aa10.15□□□□□ -0.78
KTN1-213ENST00000554306 TTC37Q6PGP7 1564 aa10.15□□□□□ -0.78
KTN1-213ENST00000554306 SNRPBP14678 240 aaKnown RBP10.15□□□□□ -0.78
KTN1-213ENST00000554306 FAM69CQ0P6D2 419 aa10.15□□□□□ -0.78
KTN1-213ENST00000554306 TPRNQ4KMQ1 711 aa10.15□□□□□ -0.78
KTN1-213ENST00000554306 C1QTNF2Q9BXJ5 285 aa10.15□□□□□ -0.78
KTN1-213ENST00000554306 ABCC10Q5T3U5 1492 aa10.15□□□□□ -0.78
KTN1-213ENST00000554306 KIF13AQ9H1H9 1805 aa10.14□□□□□ -0.79
KTN1-213ENST00000554306 DIP2BQ9P265 1576 aa10.14□□□□□ -0.79
KTN1-213ENST00000554306 CDC42BPBQ9Y5S2 1711 aa10.14□□□□□ -0.79
KTN1-213ENST00000554306 WDR4P57081 412 aaKnown RBP10.14□□□□□ -0.79
KTN1-213ENST00000554306 NEUROD2Q15784 382 aa10.14□□□□□ -0.79
KTN1-213ENST00000554306 FBXO31Q5XUX0 539 aaPredicted RBP10.14□□□□□ -0.79
KTN1-213ENST00000554306 TREML4Q6UXN2 200 aa10.14□□□□□ -0.79
KTN1-213ENST00000554306 TRMT44Q8IYL2 757 aaKnown RBP10.14□□□□□ -0.79
KTN1-213ENST00000554306 LRRN4Q8WUT4 740 aa10.14□□□□□ -0.79
KTN1-213ENST00000554306 MAP4K5Q9Y4K4 846 aa10.14□□□□□ -0.79
KTN1-213ENST00000554306 MYOM3Q5VTT5 1437 aa10.14□□□□□ -0.79
KTN1-213ENST00000554306 PREX2Q70Z35 1606 aa10.14□□□□□ -0.79
KTN1-213ENST00000554306 ZC3H4Q9UPT8 1303 aaKnown RBP10.13□□□□□ -0.79
KTN1-213ENST00000554306 TSPOAP1O95153 1857 aa10.13□□□□□ -0.79
KTN1-213ENST00000554306 AP1G2O75843 785 aa10.13□□□□□ -0.79
KTN1-213ENST00000554306 BMP1P13497 986 aa10.13□□□□□ -0.79
KTN1-213ENST00000554306 TIMP2P16035 220 aa10.13□□□□□ -0.79
KTN1-213ENST00000554306 PDXDC2PQ6P474 469 aa10.13□□□□□ -0.79
KTN1-213ENST00000554306 TRIM46Q7Z4K8 759 aa10.13□□□□□ -0.79
KTN1-213ENST00000554306 CFDP1Q9UEE9 299 aaPredicted RBP10.13□□□□□ -0.79
KTN1-213ENST00000554306 FKBPLQ9UIM3 349 aa10.13□□□□□ -0.79
KTN1-213ENST00000554306 CD109Q6YHK3 1445 aa10.13□□□□□ -0.79
KTN1-213ENST00000554306 PHLDB1Q86UU1 1377 aa10.13□□□□□ -0.79
KTN1-213ENST00000554306 ARHGAP5Q13017 1502 aa10.12□□□□□ -0.79
KTN1-213ENST00000554306 GPATCH8Q9UKJ3 1502 aaKnown RBP10.12□□□□□ -0.79
KTN1-213ENST00000554306 MAP3K4Q9Y6R4 1608 aa10.12□□□□□ -0.79
KTN1-213ENST00000554306 MAGEB6P1A0A0J9YX57 407 aa10.12□□□□□ -0.79
KTN1-213ENST00000554306 MIA2Q96PC5 1412 aa10.12□□□□□ -0.79
KTN1-213ENST00000554306 PTPN23Q9H3S7 1636 aa10.11□□□□□ -0.79
KTN1-213ENST00000554306 CFAP74Q9C0B2 1584 aa10.11□□□□□ -0.79
KTN1-213ENST00000554306 PLCH2O75038 1416 aa10.11□□□□□ -0.79
KTN1-213ENST00000554306 GRM5P41594 1212 aa10.11□□□□□ -0.79
KTN1-213ENST00000554306 FAM50AQ14320 339 aaKnown RBP10.11□□□□□ -0.79
KTN1-213ENST00000554306 EFCAB2Q5VUJ9 269 aa10.11□□□□□ -0.79
KTN1-213ENST00000554306 PNMA1Q8ND90 353 aa10.11□□□□□ -0.79
KTN1-213ENST00000554306 PCMTD1Q96MG8 357 aaPredicted RBP10.11□□□□□ -0.79
KTN1-213ENST00000554306 KLF16Q9BXK1 252 aaPredicted RBP10.11□□□□□ -0.79
KTN1-213ENST00000554306 ZNF777Q9ULD5 760 aaPredicted RBP10.11□□□□□ -0.79
KTN1-213ENST00000554306 ARAP3Q8WWN8 1544 aa10.11□□□□□ -0.79
KTN1-213ENST00000554306 FGD6Q6ZV73 1430 aa10.1□□□□□ -0.79
KTN1-213ENST00000554306 TRIM26Q12899 539 aaPredicted RBP10.1□□□□□ -0.79
KTN1-213ENST00000554306 NR6A1Q15406 480 aa10.1□□□□□ -0.79
KTN1-213ENST00000554306 VASH1Q7L8A9 365 aaPredicted RBP10.1□□□□□ -0.79
KTN1-213ENST00000554306 ARHGAP9Q9BRR9 750 aa10.1□□□□□ -0.79
KTN1-213ENST00000554306 WFS1O76024 890 aa10.09□□□□□ -0.79
KTN1-213ENST00000554306 ZIC2O95409 532 aaPredicted RBP10.09□□□□□ -0.79
KTN1-213ENST00000554306 SCARF1Q14162 830 aa10.09□□□□□ -0.79
KTN1-213ENST00000554306 MRPL14Q6P1L8 145 aaKnown RBP10.09□□□□□ -0.79
KTN1-213ENST00000554306 CARD14Q9BXL6 1004 aa10.09□□□□□ -0.79
KTN1-213ENST00000554306 RRBP1Q9P2E9 1410 aaKnown RBP10.08□□□□□ -0.8
KTN1-213ENST00000554306 NR3C2P08235 984 aa10.08□□□□□ -0.8
KTN1-213ENST00000554306 FSHRP23945 695 aa10.08□□□□□ -0.8
KTN1-213ENST00000554306 RFC5P40937 340 aa10.08□□□□□ -0.8
KTN1-213ENST00000554306 ERFEQ4G0M1 354 aa10.08□□□□□ -0.8
KTN1-213ENST00000554306 LCE2AQ5TA79 106 aaPredicted RBP10.08□□□□□ -0.8
KTN1-213ENST00000554306 ZFP42Q96MM3 310 aa10.08□□□□□ -0.8
KTN1-213ENST00000554306 CDV3Q9UKY7 258 aaKnown RBP10.08□□□□□ -0.8
KTN1-213ENST00000554306 TEX14Q8IWB6 1497 aa10.08□□□□□ -0.8
KTN1-213ENST00000554306 FANCAO15360 1455 aa10.07□□□□□ -0.8
KTN1-213ENST00000554306 PLEKHH2Q8IVE3 1493 aa10.07□□□□□ -0.8
KTN1-213ENST00000554306 USP17L8P0C7I0 530 aa10.07□□□□□ -0.8
KTN1-213ENST00000554306 PTK2Q05397 1052 aa10.07□□□□□ -0.8
KTN1-213ENST00000554306 NFX1Q12986 1120 aaKnown RBP10.07□□□□□ -0.8
KTN1-213ENST00000554306 ITPKCQ96DU7 683 aa10.07□□□□□ -0.8
KTN1-213ENST00000554306 GPSM3Q9Y4H4 160 aa10.07□□□□□ -0.8
KTN1-213ENST00000554306 CAMSAP2Q08AD1 1489 aa10.06□□□□□ -0.8
KTN1-213ENST00000554306 TCOF1Q13428 1488 aaKnown RBP10.06□□□□□ -0.8
KTN1-213ENST00000554306 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.06□□□□□ -0.8
KTN1-213ENST00000554306 TMEM259Q4ZIN3 620 aa10.06□□□□□ -0.8
KTN1-213ENST00000554306 ZBTB33Q86T24 672 aa10.06□□□□□ -0.8
KTN1-213ENST00000554306 IL27Q8NEV9 243 aa10.06□□□□□ -0.8
KTN1-213ENST00000554306 SAMD9LQ8IVG5 1584 aa10.05□□□□□ -0.8
KTN1-213ENST00000554306 NEO1Q92859 1461 aa10.05□□□□□ -0.8
KTN1-213ENST00000554306 TERTO14746 1132 aaKnown RBP10.05□□□□□ -0.8
KTN1-213ENST00000554306 BRPF1P55201 1214 aaPredicted RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms