RNA–Protein interactions for RNA: ENST00000554252.1

AL390816.2-201, humanhuman

TSL 3 BASIC

Gene AL390816.2, Length 737 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL390816.2-201ENST00000554252 U2AF1L5P0DN76 240 aaPredicted RBP28.49■■■□□ 2.15
AL390816.2-201ENST00000554252 U2AF1Q01081 240 aaKnown RBP eCLIP28.49■■■□□ 2.15
AL390816.2-201ENST00000554252 CCDC184Q52MB2 194 aa28.49■■■□□ 2.15
AL390816.2-201ENST00000554252 SRCAPQ6ZRS2 3230 aa28.49■■■□□ 2.15
AL390816.2-201ENST00000554252 WDR43Q15061 677 aaKnown RBP eCLIP28.48■■■□□ 2.15
AL390816.2-201ENST00000554252 SULT6B1Q6IMI4 303 aa28.47■■■□□ 2.15
AL390816.2-201ENST00000554252 WNK3Q9BYP7 1800 aa28.46■■■□□ 2.15
AL390816.2-201ENST00000554252 DISP2A7MBM2 1401 aa28.46■■■□□ 2.15
AL390816.2-201ENST00000554252 CCER2I3L3R5 266 aa28.45■■■□□ 2.14
AL390816.2-201ENST00000554252 HMOX1P09601 288 aa28.45■■■□□ 2.14
AL390816.2-201ENST00000554252 R3HDM1Q15032 1099 aaKnown RBP28.45■■■□□ 2.14
AL390816.2-201ENST00000554252 RAPGEF4Q8WZA2 1011 aa28.45■■■□□ 2.14
AL390816.2-201ENST00000554252 CAMKK2Q96RR4 588 aa28.45■■■□□ 2.14
AL390816.2-201ENST00000554252 IGSF1Q8N6C5 1336 aa28.44■■■□□ 2.14
AL390816.2-201ENST00000554252 COL3A1P02461 1466 aaPredicted RBP28.44■■■□□ 2.14
AL390816.2-201ENST00000554252 OVOS2A0A0G2JMS6 1433 aa28.43■■■□□ 2.14
AL390816.2-201ENST00000554252 IL2RBP14784 551 aa28.42■■■□□ 2.14
AL390816.2-201ENST00000554252 TATP17735 454 aaPredicted RBP28.41■■■□□ 2.14
AL390816.2-201ENST00000554252 AEBP1Q8IUX7 1158 aa28.41■■■□□ 2.14
AL390816.2-201ENST00000554252 MARCH10Q8NA82 808 aaPredicted RBP28.4■■■□□ 2.14
AL390816.2-201ENST00000554252 CDCA7Q9BWT1 371 aaPredicted RBP28.4■■■□□ 2.14
AL390816.2-201ENST00000554252 EXOC5O00471 708 aa28.37■■■□□ 2.13
AL390816.2-201ENST00000554252 FCHSD2O94868 740 aa28.37■■■□□ 2.13
AL390816.2-201ENST00000554252 PTF1AQ7RTS3 328 aa28.37■■■□□ 2.13
AL390816.2-201ENST00000554252 PNNQ9H307 717 aaKnown RBP28.37■■■□□ 2.13
AL390816.2-201ENST00000554252 PNISRQ8TF01 805 aaKnown RBP28.36■■■□□ 2.13
AL390816.2-201ENST00000554252 ADAMTS8Q9UP79 889 aa28.36■■■□□ 2.13
AL390816.2-201ENST00000554252 NEFMP07197 916 aa28.35■■■□□ 2.13
AL390816.2-201ENST00000554252 PRKAR2BP31323 418 aa28.34■■■□□ 2.13
AL390816.2-201ENST00000554252 FAM9BQ8IZU0 186 aa28.34■■■□□ 2.13
AL390816.2-201ENST00000554252 RREB1Q92766 1687 aa28.33■■■□□ 2.13
AL390816.2-201ENST00000554252 SBF2Q86WG5 1849 aa28.33■■■□□ 2.13
AL390816.2-201ENST00000554252 NUP188Q5SRE5 1749 aa28.32■■■□□ 2.12
AL390816.2-201ENST00000554252 PLEKHO1Q53GL0 409 aaPredicted RBP28.32■■■□□ 2.12
AL390816.2-201ENST00000554252 RSPH6AQ9H0K4 717 aa28.32■■■□□ 2.12
AL390816.2-201ENST00000554252 ZCRB1Q8TBF4 217 aaKnown RBP28.31■■■□□ 2.12
AL390816.2-201ENST00000554252 FAM208AQ9UK61 1670 aaKnown RBP28.31■■■□□ 2.12
AL390816.2-201ENST00000554252 TNS2Q63HR2 1409 aa28.3■■■□□ 2.12
AL390816.2-201ENST00000554252 KDRP35968 1356 aa28.3■■■□□ 2.12
AL390816.2-201ENST00000554252 SPG7Q9UQ90 795 aa28.3■■■□□ 2.12
AL390816.2-201ENST00000554252 NCAPD2Q15021 1401 aa28.29■■■□□ 2.12
AL390816.2-201ENST00000554252 BCL11BQ9C0K0 894 aaPredicted RBP28.29■■■□□ 2.12
AL390816.2-201ENST00000554252 AMOTQ4VCS5 1084 aa28.28■■■□□ 2.12
AL390816.2-201ENST00000554252 NBPF14Q5TI25 921 aa28.28■■■□□ 2.12
AL390816.2-201ENST00000554252 DDX54Q8TDD1 881 aaKnown RBP28.28■■■□□ 2.12
AL390816.2-201ENST00000554252 ACSBG1Q96GR2 724 aa28.28■■■□□ 2.12
AL390816.2-201ENST00000554252 RGPD2P0DJD1 1756 aa28.27■■■□□ 2.12
AL390816.2-201ENST00000554252 LRP5O75197 1615 aa28.27■■■□□ 2.12
AL390816.2-201ENST00000554252 MAPK8IP3Q9UPT6 1336 aa28.26■■■□□ 2.11
AL390816.2-201ENST00000554252 CCDC146Q8IYE0 955 aa28.26■■■□□ 2.11
AL390816.2-201ENST00000554252 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.26■■■□□ 2.11
AL390816.2-201ENST00000554252 MEGF6O75095 1541 aa28.25■■■□□ 2.11
AL390816.2-201ENST00000554252 KCNQ2O43526 872 aa28.24■■■□□ 2.11
AL390816.2-201ENST00000554252 PHACTR3Q96KR7 559 aa28.24■■■□□ 2.11
AL390816.2-201ENST00000554252 ZNF530Q6P9A1 599 aaPredicted RBP28.23■■■□□ 2.11
AL390816.2-201ENST00000554252 RUNDC1Q96C34 613 aa28.23■■■□□ 2.11
AL390816.2-201ENST00000554252 PLEKHF1Q96S99 279 aa28.22■■■□□ 2.11
AL390816.2-201ENST00000554252 PLSCR1O15162 318 aa28.21■■■□□ 2.11
AL390816.2-201ENST00000554252 MTHFSDQ2M296 383 aaKnown RBP28.21■■■□□ 2.11
AL390816.2-201ENST00000554252 C1orf141Q5JVX7 400 aa28.2■■■□□ 2.1
AL390816.2-201ENST00000554252 GAS2L2Q8NHY3 880 aa28.2■■■□□ 2.1
AL390816.2-201ENST00000554252 PCDH11XQ9BZA7 1347 aa28.19■■■□□ 2.1
AL390816.2-201ENST00000554252 PCDH11YQ9BZA8 1340 aa28.19■■■□□ 2.1
AL390816.2-201ENST00000554252 BCL9O00512 1426 aa28.19■■■□□ 2.1
AL390816.2-201ENST00000554252 IFNL2Q8IZJ0 200 aa28.18■■■□□ 2.1
AL390816.2-201ENST00000554252 PLEKHG2Q9H7P9 1386 aa28.17■■■□□ 2.1
AL390816.2-201ENST00000554252 ANO8Q9HCE9 1232 aaPredicted RBP28.17■■■□□ 2.1
AL390816.2-201ENST00000554252 CYP27B1O15528 508 aa28.16■■■□□ 2.1
AL390816.2-201ENST00000554252 RGPD3A6NKT7 1758 aaPredicted RBP28.16■■■□□ 2.1
AL390816.2-201ENST00000554252 RGPD4Q7Z3J3 1758 aa28.16■■■□□ 2.1
AL390816.2-201ENST00000554252 PROM2Q8N271 834 aa28.15■■■□□ 2.1
AL390816.2-201ENST00000554252 NHSQ6T4R5 1651 aa28.14■■■□□ 2.1
AL390816.2-201ENST00000554252 PHKG2P15735 406 aa28.14■■■□□ 2.1
AL390816.2-201ENST00000554252 NEUROD2Q15784 382 aa28.14■■■□□ 2.1
AL390816.2-201ENST00000554252 NFE2L2Q16236 605 aa28.14■■■□□ 2.1
AL390816.2-201ENST00000554252 AKAP4Q5JQC9 854 aa28.14■■■□□ 2.1
AL390816.2-201ENST00000554252 APAF1O14727 1248 aa28.13■■■□□ 2.09
AL390816.2-201ENST00000554252 HSP90AB1P08238 724 aaKnown RBP28.13■■■□□ 2.09
AL390816.2-201ENST00000554252 TXNRD1Q16881 649 aa28.13■■■□□ 2.09
AL390816.2-201ENST00000554252 RRP7AQ9Y3A4 280 aaKnown RBP28.12■■■□□ 2.09
AL390816.2-201ENST00000554252 KAT6BQ8WYB5 2073 aa28.12■■■□□ 2.09
AL390816.2-201ENST00000554252 TMPOP42166 694 aaKnown RBP28.11■■■□□ 2.09
AL390816.2-201ENST00000554252 RIPK4P57078 832 aa28.11■■■□□ 2.09
AL390816.2-201ENST00000554252 RTF1Q92541 710 aaKnown RBP28.11■■■□□ 2.09
AL390816.2-201ENST00000554252 GNAT3A8MTJ3 354 aa28.1■■■□□ 2.09
AL390816.2-201ENST00000554252 SENP3-EIF4A1A0A087X0R7 540 aa28.09■■■□□ 2.09
AL390816.2-201ENST00000554252 MPRIPQ6WCQ1 1025 aa28.09■■■□□ 2.09
AL390816.2-201ENST00000554252 SYTL4Q96C24 671 aaPredicted RBP28.08■■■□□ 2.09
AL390816.2-201ENST00000554252 BTAF1O14981 1849 aa28.07■■■□□ 2.08
AL390816.2-201ENST00000554252 DCAF5Q96JK2 942 aa28.07■■■□□ 2.08
AL390816.2-201ENST00000554252 PDGFDQ9GZP0 370 aaPredicted RBP28.07■■■□□ 2.08
AL390816.2-201ENST00000554252 NKX1-1Q15270 411 aaPredicted RBP28.06■■■□□ 2.08
AL390816.2-201ENST00000554252 STK32BQ9NY57 414 aa28.06■■■□□ 2.08
AL390816.2-201ENST00000554252 MAP3K5Q99683 1374 aa28.05■■■□□ 2.08
AL390816.2-201ENST00000554252 SALL2Q9Y467 1007 aaPredicted RBP28.05■■■□□ 2.08
AL390816.2-201ENST00000554252 HTATSF1O43719 755 aaKnown RBP28.04■■■□□ 2.08
AL390816.2-201ENST00000554252 LMOD3Q0VAK6 560 aa28.04■■■□□ 2.08
AL390816.2-201ENST00000554252 SPON1Q9HCB6 807 aa28.04■■■□□ 2.08
AL390816.2-201ENST00000554252 LGR6Q9HBX8 967 aa28.03■■■□□ 2.08
AL390816.2-201ENST00000554252 PPP1R1BQ9UD71 204 aaPredicted RBP28.03■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms