RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 DBN1Q16643 649 aa6.57□□□□□ -1.36
SRP54-204ENST00000553923 PRICKLE2Q7Z3G6 844 aa6.57□□□□□ -1.36
SRP54-204ENST00000553923 ZNF837Q96EG3 531 aaPredicted RBP6.57□□□□□ -1.36
SRP54-204ENST00000553923 GMCL1Q96IK5 515 aa6.57□□□□□ -1.36
SRP54-204ENST00000553923 TRIM34Q9BYJ4 488 aa6.57□□□□□ -1.36
SRP54-204ENST00000553923 GPBP1L1Q9HC44 474 aaPredicted RBP6.57□□□□□ -1.36
SRP54-204ENST00000553923 RHOQP17081 205 aa6.56□□□□□ -1.36
SRP54-204ENST00000553923 TRIM22Q8IYM9 498 aa6.56□□□□□ -1.36
SRP54-204ENST00000553923 KDM4CQ9H3R0 1056 aa6.56□□□□□ -1.36
SRP54-204ENST00000553923 MBIPQ9NS73 344 aa6.56□□□□□ -1.36
SRP54-204ENST00000553923 DDRGK1Q96HY6 314 aa6.55□□□□□ -1.36
SRP54-204ENST00000553923 CYLDQ9NQC7 956 aa6.55□□□□□ -1.36
SRP54-204ENST00000553923 CNTNAP5Q8WYK1 1306 aa6.54□□□□□ -1.36
SRP54-204ENST00000553923 GIGYF1O75420 1035 aaPredicted RBP6.54□□□□□ -1.36
SRP54-204ENST00000553923 GPC1P35052 558 aa6.54□□□□□ -1.36
SRP54-204ENST00000553923 RFC5P40937 340 aa6.54□□□□□ -1.36
SRP54-204ENST00000553923 MAP3K10Q02779 954 aa6.54□□□□□ -1.36
SRP54-204ENST00000553923 PLA2G4EQ3MJ16 856 aa6.54□□□□□ -1.36
SRP54-204ENST00000553923 IGF1RP08069 1367 aa6.54□□□□□ -1.36
SRP54-204ENST00000553923 ATP5J2-PTCD1G3V325 749 aa6.53□□□□□ -1.36
SRP54-204ENST00000553923 GPR25O00155 361 aa6.53□□□□□ -1.36
SRP54-204ENST00000553923 PNMA1Q8ND90 353 aa6.53□□□□□ -1.36
SRP54-204ENST00000553923 ACDQ96AP0 544 aa6.53□□□□□ -1.36
SRP54-204ENST00000553923 A0A1W2PRU2 124 aa6.52□□□□□ -1.37
SRP54-204ENST00000553923 ERVK-9P63128 1117 aa6.52□□□□□ -1.37
SRP54-204ENST00000553923 DCAF5Q96JK2 942 aa6.52□□□□□ -1.37
SRP54-204ENST00000553923 GRIP2Q9C0E4 1043 aa6.52□□□□□ -1.37
SRP54-204ENST00000553923 ENAMQ9NRM1 1142 aa6.52□□□□□ -1.37
SRP54-204ENST00000553923 DYRK1BQ9Y463 629 aa6.52□□□□□ -1.37
SRP54-204ENST00000553923 BCRP11274 1271 aa6.51□□□□□ -1.37
SRP54-204ENST00000553923 GJD4Q96KN9 370 aaPredicted RBP6.51□□□□□ -1.37
SRP54-204ENST00000553923 ZBBXA8MT70 800 aa6.5□□□□□ -1.37
SRP54-204ENST00000553923 PROCP04070 461 aa6.5□□□□□ -1.37
SRP54-204ENST00000553923 THBS1P07996 1170 aa6.5□□□□□ -1.37
SRP54-204ENST00000553923 POU4F2Q12837 409 aa6.5□□□□□ -1.37
SRP54-204ENST00000553923 BEND7Q8N7W2 519 aaPredicted RBP6.5□□□□□ -1.37
SRP54-204ENST00000553923 SPOCK3Q9BQ16 436 aa6.5□□□□□ -1.37
SRP54-204ENST00000553923 LRRC4BQ9NT99 713 aa6.5□□□□□ -1.37
SRP54-204ENST00000553923 PHF20L1A8MW92 1017 aa6.49□□□□□ -1.37
SRP54-204ENST00000553923 SPATA31C2B4DYI2 1134 aa6.49□□□□□ -1.37
SRP54-204ENST00000553923 MEN1O00255 615 aa6.49□□□□□ -1.37
SRP54-204ENST00000553923 ADAM23O75077 832 aa6.49□□□□□ -1.37
SRP54-204ENST00000553923 FBXO45P0C2W1 286 aa6.49□□□□□ -1.37
SRP54-204ENST00000553923 CC2D2BQ6DHV5 1058 aa6.49□□□□□ -1.37
SRP54-204ENST00000553923 GTPBP3Q969Y2 492 aaKnown RBP6.49□□□□□ -1.37
SRP54-204ENST00000553923 H7C1W4 665 aa6.48□□□□□ -1.37
SRP54-204ENST00000553923 MSTNO14793 375 aa6.48□□□□□ -1.37
SRP54-204ENST00000553923 TRAK2O60296 914 aa6.48□□□□□ -1.37
SRP54-204ENST00000553923 SCTRP47872 440 aa6.48□□□□□ -1.37
SRP54-204ENST00000553923 CLN3Q13286 438 aa6.48□□□□□ -1.37
SRP54-204ENST00000553923 WDR44Q5JSH3 913 aa6.48□□□□□ -1.37
SRP54-204ENST00000553923 NBPF10Q6P3W6 841 aaKnown RBP6.48□□□□□ -1.37
SRP54-204ENST00000553923 FOXR1Q6PIV2 292 aa6.48□□□□□ -1.37
SRP54-204ENST00000553923 RIPOR1Q6ZS17 1223 aa6.48□□□□□ -1.37
SRP54-204ENST00000553923 CCDC125Q86Z20 511 aa6.48□□□□□ -1.37
SRP54-204ENST00000553923 NBPF15Q8N660 670 aa6.48□□□□□ -1.37
SRP54-204ENST00000553923 TRIM52Q96A61 297 aa6.48□□□□□ -1.37
SRP54-204ENST00000553923 OSBPL3Q9H4L5 887 aa6.47□□□□□ -1.37
SRP54-204ENST00000553923 GOPCQ9HD26 462 aa6.47□□□□□ -1.37
SRP54-204ENST00000553923 ATP1B4Q9UN42 357 aaPredicted RBP6.47□□□□□ -1.37
SRP54-204ENST00000553923 PCDHB9Q9Y5E1 797 aa6.47□□□□□ -1.37
SRP54-204ENST00000553923 OIP5O43482 229 aa6.46□□□□□ -1.38
SRP54-204ENST00000553923 UBAP2LQ14157 1087 aaKnown RBP6.46□□□□□ -1.38
SRP54-204ENST00000553923 TMEM259Q4ZIN3 620 aa6.46□□□□□ -1.38
SRP54-204ENST00000553923 XP32Q5T750 250 aa6.46□□□□□ -1.38
SRP54-204ENST00000553923 NEDD1Q8NHV4 660 aa6.46□□□□□ -1.38
SRP54-204ENST00000553923 GAS2L1Q99501 681 aaPredicted RBP6.46□□□□□ -1.38
SRP54-204ENST00000553923 MX2P20592 715 aa6.45□□□□□ -1.38
SRP54-204ENST00000553923 SNRPNP63162 240 aaKnown RBP6.45□□□□□ -1.38
SRP54-204ENST00000553923 SLC27A3Q5K4L6 730 aa6.45□□□□□ -1.38
SRP54-204ENST00000553923 C1orf229Q6ZS94 237 aaPredicted RBP6.45□□□□□ -1.38
SRP54-204ENST00000553923 TRERF1Q96PN7 1200 aa6.45□□□□□ -1.38
SRP54-204ENST00000553923 HRH3Q9Y5N1 445 aa6.45□□□□□ -1.38
SRP54-204ENST00000553923 GPR37L1O60883 481 aa6.44□□□□□ -1.38
SRP54-204ENST00000553923 F11P03951 625 aa6.44□□□□□ -1.38
SRP54-204ENST00000553923 RNF20Q5VTR2 975 aa6.44□□□□□ -1.38
SRP54-204ENST00000553923 NLRP3Q96P20 1036 aa6.44□□□□□ -1.38
SRP54-204ENST00000553923 CFHR5Q9BXR6 569 aa6.44□□□□□ -1.38
SRP54-204ENST00000553923 NUCKS1Q9H1E3 243 aaKnown RBP6.44□□□□□ -1.38
SRP54-204ENST00000553923 TIMMDC1Q9NPL8 285 aa6.44□□□□□ -1.38
SRP54-204ENST00000553923 SHISA8B8ZZ34 492 aa6.43□□□□□ -1.38
SRP54-204ENST00000553923 WASLO00401 505 aaPredicted RBP6.43□□□□□ -1.38
SRP54-204ENST00000553923 MCCD1P59942 119 aaPredicted RBP6.43□□□□□ -1.38
SRP54-204ENST00000553923 CYP2U1Q7Z449 544 aa6.43□□□□□ -1.38
SRP54-204ENST00000553923 PODNQ7Z5L7 613 aa6.43□□□□□ -1.38
SRP54-204ENST00000553923 ARHGEF10LQ9HCE6 1279 aa6.43□□□□□ -1.38
SRP54-204ENST00000553923 KRBA1A5PL33 1030 aa6.42□□□□□ -1.38
SRP54-204ENST00000553923 IL2RAP01589 272 aa6.42□□□□□ -1.38
SRP54-204ENST00000553923 HOXB4P17483 251 aaPredicted RBP6.42□□□□□ -1.38
SRP54-204ENST00000553923 NR1H3Q13133 447 aa6.42□□□□□ -1.38
SRP54-204ENST00000553923 TAS1R3Q7RTX0 852 aa6.42□□□□□ -1.38
SRP54-204ENST00000553923 KLRG1Q96E93 195 aa6.42□□□□□ -1.38
SRP54-204ENST00000553923 OXCT2Q9BYC2 517 aaPredicted RBP6.42□□□□□ -1.38
SRP54-204ENST00000553923 COL8A1P27658 744 aa6.41□□□□□ -1.38
SRP54-204ENST00000553923 MAP2K3P46734 347 aa6.41□□□□□ -1.38
SRP54-204ENST00000553923 ESYT1Q9BSJ8 1104 aa6.41□□□□□ -1.38
SRP54-204ENST00000553923 NSFL1CQ9UNZ2 370 aaKnown RBP6.41□□□□□ -1.38
SRP54-204ENST00000553923 PCDHB11Q9Y5F2 797 aa6.41□□□□□ -1.38
SRP54-204ENST00000553923 GNRH1P01148 92 aa6.4□□□□□ -1.38
SRP54-204ENST00000553923 CENPCQ03188 943 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms