RNA–Protein interactions for RNA: ENST00000553649.2

SMARCE1P3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 3, humanhuman

BASIC

Gene SMARCE1P3, Length 1,231 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P3-201ENST00000553649 SPRYD3Q8NCJ5 442 aa8.97□□□□□ -0.97
SMARCE1P3-201ENST00000553649 PRR14Q9BWN1 585 aa8.97□□□□□ -0.97
SMARCE1P3-201ENST00000553649 ACTN4O43707 911 aaKnown RBP8.96□□□□□ -0.98
SMARCE1P3-201ENST00000553649 ADAMTS2O95450 1211 aa8.96□□□□□ -0.98
SMARCE1P3-201ENST00000553649 FNBP4Q8N3X1 1017 aaPredicted RBP8.96□□□□□ -0.98
SMARCE1P3-201ENST00000553649 AAASQ9NRG9 546 aa8.96□□□□□ -0.98
SMARCE1P3-201ENST00000553649 ZNF784Q8NCA9 323 aaPredicted RBP8.95□□□□□ -0.98
SMARCE1P3-201ENST00000553649 LRRC59Q96AG4 307 aaKnown RBP8.95□□□□□ -0.98
SMARCE1P3-201ENST00000553649 TMEM134Q9H6X4 195 aa8.95□□□□□ -0.98
SMARCE1P3-201ENST00000553649 ASXL1Q8IXJ9 1541 aa8.95□□□□□ -0.98
SMARCE1P3-201ENST00000553649 DNAJB2P25686 324 aa8.94□□□□□ -0.98
SMARCE1P3-201ENST00000553649 MLLT3P42568 568 aaPredicted RBP8.94□□□□□ -0.98
SMARCE1P3-201ENST00000553649 C1QTNF8P60827 252 aa8.94□□□□□ -0.98
SMARCE1P3-201ENST00000553649 RSPH4AQ5TD94 716 aa8.94□□□□□ -0.98
SMARCE1P3-201ENST00000553649 TREML4Q6UXN2 200 aa8.94□□□□□ -0.98
SMARCE1P3-201ENST00000553649 C19orf44Q9H6X5 657 aa8.94□□□□□ -0.98
SMARCE1P3-201ENST00000553649 WDR70Q9NW82 654 aa8.94□□□□□ -0.98
SMARCE1P3-201ENST00000553649 SLC10A3P09131 477 aa8.93□□□□□ -0.98
SMARCE1P3-201ENST00000553649 ATF3P18847 181 aa8.93□□□□□ -0.98
SMARCE1P3-201ENST00000553649 SLC4A3P48751 1232 aa8.93□□□□□ -0.98
SMARCE1P3-201ENST00000553649 FAM161AQ3B820 660 aa8.93□□□□□ -0.98
SMARCE1P3-201ENST00000553649 DACH1Q9UI36 760 aa8.93□□□□□ -0.98
SMARCE1P3-201ENST00000553649 ADGRG1Q9Y653 693 aa8.93□□□□□ -0.98
SMARCE1P3-201ENST00000553649 MTUS2Q5JR59 1369 aa8.93□□□□□ -0.98
SMARCE1P3-201ENST00000553649 CEP162Q5TB80 1403 aa8.93□□□□□ -0.98
SMARCE1P3-201ENST00000553649 EIF2AK4Q9P2K8 1649 aaKnown RBP8.93□□□□□ -0.98
SMARCE1P3-201ENST00000553649 PTGDRQ13258 359 aa8.92□□□□□ -0.98
SMARCE1P3-201ENST00000553649 DDX17Q92841 729 aaKnown RBP8.92□□□□□ -0.98
SMARCE1P3-201ENST00000553649 PKD2L1Q9P0L9 805 aa8.92□□□□□ -0.98
SMARCE1P3-201ENST00000553649 PIK3C2BO00750 1634 aa8.91□□□□□ -0.98
SMARCE1P3-201ENST00000553649 ARHGEF5Q12774 1597 aa8.91□□□□□ -0.98
SMARCE1P3-201ENST00000553649 EFCAB6Q5THR3 1501 aa8.91□□□□□ -0.98
SMARCE1P3-201ENST00000553649 ADH1BP00325 375 aa8.91□□□□□ -0.98
SMARCE1P3-201ENST00000553649 CFHP08603 1231 aa8.91□□□□□ -0.98
SMARCE1P3-201ENST00000553649 R3HDM1Q15032 1099 aaKnown RBP8.91□□□□□ -0.98
SMARCE1P3-201ENST00000553649 C14orf37Q86TY3 774 aa8.91□□□□□ -0.98
SMARCE1P3-201ENST00000553649 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.91□□□□□ -0.98
SMARCE1P3-201ENST00000553649 RCCD1A6NED2 376 aa8.9□□□□□ -0.98
SMARCE1P3-201ENST00000553649 SF3B2Q13435 895 aaKnown RBP8.9□□□□□ -0.98
SMARCE1P3-201ENST00000553649 GJD4Q96KN9 370 aaPredicted RBP8.9□□□□□ -0.98
SMARCE1P3-201ENST00000553649 UNC13BO14795 1591 aa8.9□□□□□ -0.99
SMARCE1P3-201ENST00000553649 PTCH1Q13635 1447 aa8.89□□□□□ -0.99
SMARCE1P3-201ENST00000553649 KMT5BQ4FZB7 885 aa8.89□□□□□ -0.99
SMARCE1P3-201ENST00000553649 EHBP1L1Q8N3D4 1523 aa8.89□□□□□ -0.99
SMARCE1P3-201ENST00000553649 MST1RQ04912 1400 aa8.88□□□□□ -0.99
SMARCE1P3-201ENST00000553649 IDI1Q13907 227 aa8.88□□□□□ -0.99
SMARCE1P3-201ENST00000553649 RBM46Q8TBY0 533 aaKnown RBP8.88□□□□□ -0.99
SMARCE1P3-201ENST00000553649 SLC6A16Q9GZN6 736 aa8.88□□□□□ -0.99
SMARCE1P3-201ENST00000553649 ZFYVE9O95405 1425 aa8.87□□□□□ -0.99
SMARCE1P3-201ENST00000553649 DCCP43146 1447 aa8.87□□□□□ -0.99
SMARCE1P3-201ENST00000553649 CHD2O14647 1828 aaKnown RBP8.87□□□□□ -0.99
SMARCE1P3-201ENST00000553649 ADGRB3O60242 1522 aa8.86□□□□□ -0.99
SMARCE1P3-201ENST00000553649 SCUBE3Q8IX30 993 aa8.86□□□□□ -0.99
SMARCE1P3-201ENST00000553649 BCANQ96GW7 911 aa8.86□□□□□ -0.99
SMARCE1P3-201ENST00000553649 NOS1P29475 1434 aa8.86□□□□□ -0.99
SMARCE1P3-201ENST00000553649 GLI3P10071 1580 aa8.86□□□□□ -0.99
SMARCE1P3-201ENST00000553649 PLEKHG1Q9ULL1 1385 aa8.86□□□□□ -0.99
SMARCE1P3-201ENST00000553649 CEP152O94986 1710 aa8.85□□□□□ -0.99
SMARCE1P3-201ENST00000553649 LMTK2Q8IWU2 1503 aa8.85□□□□□ -0.99
SMARCE1P3-201ENST00000553649 RALGAPBQ86X10 1494 aa8.85□□□□□ -0.99
SMARCE1P3-201ENST00000553649 BAG6P46379 1132 aa8.85□□□□□ -0.99
SMARCE1P3-201ENST00000553649 FOXC1Q12948 553 aa8.85□□□□□ -0.99
SMARCE1P3-201ENST00000553649 PUS10Q3MIT2 529 aaKnown RBP8.85□□□□□ -0.99
SMARCE1P3-201ENST00000553649 TBX22Q9Y458 520 aa8.85□□□□□ -0.99
SMARCE1P3-201ENST00000553649 CEP350Q5VT06 3117 aa8.84□□□□□ -0.99
SMARCE1P3-201ENST00000553649 NR1I2O75469 434 aa8.84□□□□□ -0.99
SMARCE1P3-201ENST00000553649 PAXIP1Q6ZW49 1069 aaPredicted RBP8.84□□□□□ -0.99
SMARCE1P3-201ENST00000553649 CRIPAKQ8N1N5 446 aa8.84□□□□□ -0.99
SMARCE1P3-201ENST00000553649 CFAP44Q96MT7 982 aa8.84□□□□□ -0.99
SMARCE1P3-201ENST00000553649 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.84□□□□□ -0.99
SMARCE1P3-201ENST00000553649 PIK3R4Q99570 1358 aa8.84□□□□□ -0.99
SMARCE1P3-201ENST00000553649 SPHKAPQ2M3C7 1700 aa8.83□□□□□ -1
SMARCE1P3-201ENST00000553649 ADAMTS13Q76LX8 1427 aa8.83□□□□□ -1
SMARCE1P3-201ENST00000553649 SEPT12Q8IYM1 358 aa8.83□□□□□ -1
SMARCE1P3-201ENST00000553649 TOR4AQ9NXH8 423 aa8.83□□□□□ -1
SMARCE1P3-201ENST00000553649 GMPR2Q9P2T1 348 aaKnown RBP8.83□□□□□ -1
SMARCE1P3-201ENST00000553649 MYOM2P54296 1465 aa8.83□□□□□ -1
SMARCE1P3-201ENST00000553649 SOS2Q07890 1332 aaPredicted RBP8.82□□□□□ -1
SMARCE1P3-201ENST00000553649 DUOX2Q9NRD8 1548 aa8.82□□□□□ -1
SMARCE1P3-201ENST00000553649 AVPP01185 164 aa8.82□□□□□ -1
SMARCE1P3-201ENST00000553649 TSPY4P0CV99 314 aa8.82□□□□□ -1
SMARCE1P3-201ENST00000553649 TSPY10P0CW01 314 aa8.82□□□□□ -1
SMARCE1P3-201ENST00000553649 NINLQ9Y2I6 1382 aa8.82□□□□□ -1
SMARCE1P3-201ENST00000553649 ERBINQ96RT1 1412 aa8.81□□□□□ -1
SMARCE1P3-201ENST00000553649 PPP1R15AO75807 674 aaPredicted RBP8.81□□□□□ -1
SMARCE1P3-201ENST00000553649 SPSB2Q99619 263 aa8.81□□□□□ -1
SMARCE1P3-201ENST00000553649 PTPRUQ92729 1446 aa8.8□□□□□ -1
SMARCE1P3-201ENST00000553649 LCE2CQ5TA81 110 aa8.8□□□□□ -1
SMARCE1P3-201ENST00000553649 LAMC1P11047 1609 aa8.8□□□□□ -1
SMARCE1P3-201ENST00000553649 DISP2A7MBM2 1401 aa8.8□□□□□ -1
SMARCE1P3-201ENST00000553649 CAMTA1Q9Y6Y1 1673 aa8.79□□□□□ -1
SMARCE1P3-201ENST00000553649 WFS1O76024 890 aa8.79□□□□□ -1
SMARCE1P3-201ENST00000553649 NFX1Q12986 1120 aaKnown RBP8.79□□□□□ -1
SMARCE1P3-201ENST00000553649 LMOD2Q6P5Q4 547 aa8.79□□□□□ -1
SMARCE1P3-201ENST00000553649 KRT27Q7Z3Y8 459 aa8.79□□□□□ -1
SMARCE1P3-201ENST00000553649 UNC5CLQ8IV45 518 aa8.79□□□□□ -1
SMARCE1P3-201ENST00000553649 SLC52A1Q9NWF4 448 aa8.79□□□□□ -1
SMARCE1P3-201ENST00000553649 COL22A1Q8NFW1 1626 aaPredicted RBP8.79□□□□□ -1
SMARCE1P3-201ENST00000553649 SLIT2O94813 1529 aa8.79□□□□□ -1
SMARCE1P3-201ENST00000553649 UTRNP46939 3433 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms