RNA–Protein interactions for RNA: ENST00000553643.1

ATG2B-205, Transcript of autophagy related 2B, humanhuman

TSL 3

Gene ATG2B, Length 482 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG2B-205ENST00000553643 PRKCSHP14314 528 aaPredicted RBP9.07□□□□□ -0.96
ATG2B-205ENST00000553643 KRT76Q01546 638 aa9.07□□□□□ -0.96
ATG2B-205ENST00000553643 RNF20Q5VTR2 975 aa9.07□□□□□ -0.96
ATG2B-205ENST00000553643 ZNF592Q92610 1267 aa9.07□□□□□ -0.96
ATG2B-205ENST00000553643 TRIM52Q96A61 297 aa9.07□□□□□ -0.96
ATG2B-205ENST00000553643 ZNF330Q9Y3S2 320 aaPredicted RBP9.07□□□□□ -0.96
ATG2B-205ENST00000553643 NANOS1Q8WY41 292 aaKnown RBP9.06□□□□□ -0.96
ATG2B-205ENST00000553643 TBC1D2BQ9UPU7 963 aa9.06□□□□□ -0.96
ATG2B-205ENST00000553643 EIF4G1Q04637 1599 aaKnown RBP9.05□□□□□ -0.96
ATG2B-205ENST00000553643 CUX2O14529 1486 aa9.05□□□□□ -0.96
ATG2B-205ENST00000553643 SENP3-EIF4A1A0A087X0R7 540 aa9.05□□□□□ -0.96
ATG2B-205ENST00000553643 ATP5J2-PTCD1G3V325 749 aa9.05□□□□□ -0.96
ATG2B-205ENST00000553643 CC2D2BQ6DHV5 1058 aa9.05□□□□□ -0.96
ATG2B-205ENST00000553643 SCTRP47872 440 aa9.04□□□□□ -0.96
ATG2B-205ENST00000553643 CNTNAP3BQ96NU0 1288 aa9.04□□□□□ -0.96
ATG2B-205ENST00000553643 CNTNAP3Q9BZ76 1288 aa9.04□□□□□ -0.96
ATG2B-205ENST00000553643 ITGA6P23229 1130 aa9.03□□□□□ -0.96
ATG2B-205ENST00000553643 RNF144AP50876 292 aaPredicted RBP9.03□□□□□ -0.96
ATG2B-205ENST00000553643 PCDHB11Q9Y5F2 797 aa9.03□□□□□ -0.96
ATG2B-205ENST00000553643 IRF5Q13568 498 aa9.02□□□□□ -0.97
ATG2B-205ENST00000553643 A0A1W2PRU2 124 aa9.01□□□□□ -0.97
ATG2B-205ENST00000553643 TRAK2O60296 914 aa9.01□□□□□ -0.97
ATG2B-205ENST00000553643 LYSMD3Q7Z3D4 306 aa9.01□□□□□ -0.97
ATG2B-205ENST00000553643 OSBPL3Q9H4L5 887 aa9.01□□□□□ -0.97
ATG2B-205ENST00000553643 CEP126Q9P2H0 1117 aa9.01□□□□□ -0.97
ATG2B-205ENST00000553643 GPC1P35052 558 aa9□□□□□ -0.97
ATG2B-205ENST00000553643 CYP2U1Q7Z449 544 aa9□□□□□ -0.97
ATG2B-205ENST00000553643 COL25A1Q9BXS0 654 aaPredicted RBP9□□□□□ -0.97
ATG2B-205ENST00000553643 MEN1O00255 615 aa8.99□□□□□ -0.97
ATG2B-205ENST00000553643 RNFT1Q5M7Z0 435 aa8.99□□□□□ -0.97
ATG2B-205ENST00000553643 PRICKLE2Q7Z3G6 844 aa8.99□□□□□ -0.97
ATG2B-205ENST00000553643 VWA5B2Q8N398 1253 aa8.99□□□□□ -0.97
ATG2B-205ENST00000553643 CCDC85AQ96PX6 553 aaPredicted RBP8.99□□□□□ -0.97
ATG2B-205ENST00000553643 PRM3Q9NNZ6 103 aa8.99□□□□□ -0.97
ATG2B-205ENST00000553643 CLN3Q13286 438 aa8.98□□□□□ -0.97
ATG2B-205ENST00000553643 CDC14CA4D256 554 aa8.97□□□□□ -0.97
ATG2B-205ENST00000553643 CDCA7Q9BWT1 371 aaPredicted RBP8.97□□□□□ -0.97
ATG2B-205ENST00000553643 GDPD2Q9HCC8 539 aa8.97□□□□□ -0.97
ATG2B-205ENST00000553643 CUEDC1Q9NWM3 386 aaPredicted RBP8.97□□□□□ -0.97
ATG2B-205ENST00000553643 RHOQP17081 205 aa8.96□□□□□ -0.98
ATG2B-205ENST00000553643 GSK3AP49840 483 aa8.96□□□□□ -0.98
ATG2B-205ENST00000553643 EIF4G2P78344 907 aaKnown RBP eCLIP8.96□□□□□ -0.98
ATG2B-205ENST00000553643 MCM6Q14566 821 aa8.96□□□□□ -0.98
ATG2B-205ENST00000553643 SV2AQ7L0J3 742 aa8.96□□□□□ -0.98
ATG2B-205ENST00000553643 PHTF2Q8N3S3 785 aa8.96□□□□□ -0.98
ATG2B-205ENST00000553643 ARHGEF10LQ9HCE6 1279 aa8.96□□□□□ -0.98
ATG2B-205ENST00000553643 WHAMMQ8TF30 809 aa8.95□□□□□ -0.98
ATG2B-205ENST00000553643 NLRP3Q96P20 1036 aa8.95□□□□□ -0.98
ATG2B-205ENST00000553643 GRIP2Q9C0E4 1043 aa8.95□□□□□ -0.98
ATG2B-205ENST00000553643 VAC14Q08AM6 782 aa8.94□□□□□ -0.98
ATG2B-205ENST00000553643 TSGA10IPQ3SY00 556 aa8.94□□□□□ -0.98
ATG2B-205ENST00000553643 ESF1Q9H501 851 aaKnown RBP8.94□□□□□ -0.98
ATG2B-205ENST00000553643 GNRH1P01148 92 aa8.93□□□□□ -0.98
ATG2B-205ENST00000553643 ABL2P42684 1182 aa8.93□□□□□ -0.98
ATG2B-205ENST00000553643 SLC27A3Q5K4L6 730 aa8.93□□□□□ -0.98
ATG2B-205ENST00000553643 CHIC2Q9UKJ5 165 aa8.93□□□□□ -0.98
ATG2B-205ENST00000553643 ADAMTS8Q9UP79 889 aa8.93□□□□□ -0.98
ATG2B-205ENST00000553643 MYCP01106 439 aaPredicted RBP8.92□□□□□ -0.98
ATG2B-205ENST00000553643 IL2RAP01589 272 aa8.92□□□□□ -0.98
ATG2B-205ENST00000553643 POU4F2Q12837 409 aa8.92□□□□□ -0.98
ATG2B-205ENST00000553643 ZNF385CQ66K41 422 aaPredicted RBP8.92□□□□□ -0.98
ATG2B-205ENST00000553643 KCTD17Q8N5Z5 321 aa8.92□□□□□ -0.98
ATG2B-205ENST00000553643 RAB6BQ9NRW1 208 aa8.92□□□□□ -0.98
ATG2B-205ENST00000553643 DYRK1BQ9Y463 629 aa8.92□□□□□ -0.98
ATG2B-205ENST00000553643 SPATA31C2B4DYI2 1134 aa8.91□□□□□ -0.98
ATG2B-205ENST00000553643 KCNMA1Q12791 1236 aa8.91□□□□□ -0.98
ATG2B-205ENST00000553643 SLFNL1Q499Z3 407 aa8.91□□□□□ -0.98
ATG2B-205ENST00000553643 NBPF10Q6P3W6 841 aaKnown RBP8.91□□□□□ -0.98
ATG2B-205ENST00000553643 NBPF15Q8N660 670 aa8.91□□□□□ -0.98
ATG2B-205ENST00000553643 CNKSR1Q969H4 720 aa8.91□□□□□ -0.98
ATG2B-205ENST00000553643 ESYT1Q9BSJ8 1104 aa8.91□□□□□ -0.98
ATG2B-205ENST00000553643 HRH3Q9Y5N1 445 aa8.91□□□□□ -0.98
ATG2B-205ENST00000553643 SLURP2P0DP57 97 aa8.9□□□□□ -0.98
ATG2B-205ENST00000553643 WASHC4Q2M389 1173 aa8.9□□□□□ -0.98
ATG2B-205ENST00000553643 WDR44Q5JSH3 913 aa8.9□□□□□ -0.98
ATG2B-205ENST00000553643 RNF135Q8IUD6 432 aa8.9□□□□□ -0.98
ATG2B-205ENST00000553643 TRIM22Q8IYM9 498 aa8.9□□□□□ -0.98
ATG2B-205ENST00000553643 ZNF837Q96EG3 531 aaPredicted RBP8.9□□□□□ -0.98
ATG2B-205ENST00000553643 DOLKQ9UPQ8 538 aa8.9□□□□□ -0.98
ATG2B-205ENST00000553643 GAS6Q14393 721 aa8.89□□□□□ -0.99
ATG2B-205ENST00000553643 DBN1Q16643 649 aa8.89□□□□□ -0.99
ATG2B-205ENST00000553643 SVOPQ8N4V2 548 aa8.89□□□□□ -0.99
ATG2B-205ENST00000553643 GMCL1Q96IK5 515 aa8.89□□□□□ -0.99
ATG2B-205ENST00000553643 CENPCQ03188 943 aa8.88□□□□□ -0.99
ATG2B-205ENST00000553643 USP4Q13107 963 aa8.88□□□□□ -0.99
ATG2B-205ENST00000553643 XAGE2Q96GT9 111 aa8.88□□□□□ -0.99
ATG2B-205ENST00000553643 COG6Q9Y2V7 657 aa8.88□□□□□ -0.99
ATG2B-205ENST00000553643 WASLO00401 505 aaPredicted RBP8.87□□□□□ -0.99
ATG2B-205ENST00000553643 RASSF7Q02833 373 aa8.87□□□□□ -0.99
ATG2B-205ENST00000553643 RIPOR1Q6ZS17 1223 aa8.87□□□□□ -0.99
ATG2B-205ENST00000553643 TAS1R3Q7RTX0 852 aa8.87□□□□□ -0.99
ATG2B-205ENST00000553643 FHDC1Q9C0D6 1143 aaPredicted RBP8.87□□□□□ -0.99
ATG2B-205ENST00000553643 SOX11P35716 441 aa8.86□□□□□ -0.99
ATG2B-205ENST00000553643 GAS2L1Q99501 681 aaPredicted RBP8.86□□□□□ -0.99
ATG2B-205ENST00000553643 ARHGEF15O94989 841 aa8.85□□□□□ -0.99
ATG2B-205ENST00000553643 GDF11O95390 407 aa8.85□□□□□ -0.99
ATG2B-205ENST00000553643 ADAMTS2O95450 1211 aa8.85□□□□□ -0.99
ATG2B-205ENST00000553643 STAU1O95793 577 aaKnown RBP8.85□□□□□ -0.99
ATG2B-205ENST00000553643 OXLD1Q5BKU9 147 aa8.85□□□□□ -0.99
ATG2B-205ENST00000553643 ESCO1Q5FWF5 840 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms