RNA–Protein interactions for RNA: ENST00000553643.1

ATG2B-205, Transcript of autophagy related 2B, humanhuman

TSL 3

Gene ATG2B, Length 482 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG2B-205ENST00000553643 AEBP2Q6ZN18 517 aaPredicted RBP26.86■■□□□ 1.89
ATG2B-205ENST00000553643 CHIC1Q5VXU3 224 aa25.47■■□□□ 1.67
ATG2B-205ENST00000553643 SENP3Q9H4L4 574 aaPredicted RBP22.78■■□□□ 1.24
ATG2B-205ENST00000553643 PHF23Q9BUL5 403 aaPredicted RBP22.57■■□□□ 1.2
ATG2B-205ENST00000553643 FOXD1Q16676 465 aa21.32■■□□□ 1
ATG2B-205ENST00000553643 PLPPR3Q6T4P5 718 aa20.42■□□□□ 0.86
ATG2B-205ENST00000553643 PPP6R1Q9UPN7 881 aa20.03■□□□□ 0.8
ATG2B-205ENST00000553643 ADRA2BP18089 450 aa19.96■□□□□ 0.79
ATG2B-205ENST00000553643 PIAS4Q8N2W9 510 aaPredicted RBP19.91■□□□□ 0.78
ATG2B-205ENST00000553643 MSH5O43196 834 aa19.82■□□□□ 0.76
ATG2B-205ENST00000553643 POTEDQ86YR6 584 aa19.37■□□□□ 0.69
ATG2B-205ENST00000553643 MAPK8IP2Q13387 824 aaPredicted RBP18.35■□□□□ 0.53
ATG2B-205ENST00000553643 SCAF1Q9H7N4 1312 aaKnown RBP18.09■□□□□ 0.49
ATG2B-205ENST00000553643 DMRT2Q9Y5R5 561 aa18.09■□□□□ 0.49
ATG2B-205ENST00000553643 PPP4R3CPQ6ZMV5 832 aa17.93■□□□□ 0.46
ATG2B-205ENST00000553643 CNKSR2Q8WXI2 1034 aa17.53■□□□□ 0.4
ATG2B-205ENST00000553643 DCAF8L1A6NGE4 600 aa17.43■□□□□ 0.38
ATG2B-205ENST00000553643 HOXD11P31277 338 aaPredicted RBP17.43■□□□□ 0.38
ATG2B-205ENST00000553643 NCBP3Q53F19 620 aaKnown RBP17.31■□□□□ 0.36
ATG2B-205ENST00000553643 RNF216Q9NWF9 866 aaPredicted RBP17.31■□□□□ 0.36
ATG2B-205ENST00000553643 NPM3O75607 178 aaKnown RBP17.09■□□□□ 0.33
ATG2B-205ENST00000553643 CACNB1Q02641 598 aaPredicted RBP17.06■□□□□ 0.32
ATG2B-205ENST00000553643 KCNA4P22459 653 aa17.02■□□□□ 0.32
ATG2B-205ENST00000553643 RNF39Q9H2S5 420 aa16.97■□□□□ 0.31
ATG2B-205ENST00000553643 DNAJC5BQ9UF47 199 aa16.74■□□□□ 0.27
ATG2B-205ENST00000553643 C1QBPQ07021 282 aaKnown RBP16.67■□□□□ 0.26
ATG2B-205ENST00000553643 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.65■□□□□ 0.26
ATG2B-205ENST00000553643 U3KPZ7 1027 aaPredicted RBP16.33■□□□□ 0.2
ATG2B-205ENST00000553643 SLC4A2P04920 1241 aa16.28■□□□□ 0.2
ATG2B-205ENST00000553643 SPINK5Q9NQ38 1064 aaPredicted RBP16.12■□□□□ 0.17
ATG2B-205ENST00000553643 SLC4A1APQ9BWU0 796 aaKnown RBP16.1■□□□□ 0.17
ATG2B-205ENST00000553643 CAPN15O75808 1086 aa16.05■□□□□ 0.16
ATG2B-205ENST00000553643 DSG3P32926 999 aa15.93■□□□□ 0.14
ATG2B-205ENST00000553643 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.84■□□□□ 0.13
ATG2B-205ENST00000553643 HNRNPUL2Q1KMD3 747 aaKnown RBP15.84■□□□□ 0.13
ATG2B-205ENST00000553643 TRHP20396 242 aaPredicted RBP15.83■□□□□ 0.12
ATG2B-205ENST00000553643 MYCNP04198 464 aaPredicted RBP15.79■□□□□ 0.12
ATG2B-205ENST00000553643 FOXD4L1Q9NU39 408 aa15.79■□□□□ 0.12
ATG2B-205ENST00000553643 SAMD1Q6SPF0 538 aaPredicted RBP15.78■□□□□ 0.12
ATG2B-205ENST00000553643 APLP2Q06481 763 aa15.77■□□□□ 0.12
ATG2B-205ENST00000553643 ABCB7O75027 752 aa15.74■□□□□ 0.11
ATG2B-205ENST00000553643 ZNF219Q9P2Y4 722 aaPredicted RBP15.69■□□□□ 0.1
ATG2B-205ENST00000553643 ZBTB22O15209 634 aa15.68■□□□□ 0.1
ATG2B-205ENST00000553643 ATF5Q9Y2D1 282 aaPredicted RBP15.43■□□□□ 0.06
ATG2B-205ENST00000553643 POLA2Q14181 598 aa15.4■□□□□ 0.06
ATG2B-205ENST00000553643 ATXN8OSP0DMR3 200 aa15.29■□□□□ 0.04
ATG2B-205ENST00000553643 CSRNP3Q8WYN3 585 aa15.19■□□□□ 0.02
ATG2B-205ENST00000553643 POTEHQ6S545 545 aa15.17■□□□□ 0.02
ATG2B-205ENST00000553643 EHMT2Q96KQ7 1210 aa15.11■□□□□ 0.01
ATG2B-205ENST00000553643 RBM42Q9BTD8 480 aaKnown RBP15.1■□□□□ 0.01
ATG2B-205ENST00000553643 ZBTB12Q9Y330 459 aaPredicted RBP15.02■□□□□ -0
ATG2B-205ENST00000553643 OSCARQ8IYS5 282 aa14.92□□□□□ -0.02
ATG2B-205ENST00000553643 CHRDL2Q6WN34 429 aa14.83□□□□□ -0.04
ATG2B-205ENST00000553643 AKT1S1Q96B36 256 aa14.8□□□□□ -0.04
ATG2B-205ENST00000553643 FBLN2P98095 1184 aa14.75□□□□□ -0.05
ATG2B-205ENST00000553643 MKRN4PQ13434 485 aaPredicted RBP14.74□□□□□ -0.05
ATG2B-205ENST00000553643 REM2Q8IYK8 340 aaPredicted RBP14.72□□□□□ -0.05
ATG2B-205ENST00000553643 SPDYE2BA6NHP3 402 aa14.59□□□□□ -0.07
ATG2B-205ENST00000553643 SPDYE6P0CI01 402 aa14.59□□□□□ -0.07
ATG2B-205ENST00000553643 SPDYE2Q495Y8 402 aa14.59□□□□□ -0.07
ATG2B-205ENST00000553643 PITPNM1O00562 1244 aa14.58□□□□□ -0.08
ATG2B-205ENST00000553643 PIP4P2Q8N4L2 257 aa14.52□□□□□ -0.09
ATG2B-205ENST00000553643 SSUH2Q9Y2M2 353 aa14.46□□□□□ -0.09
ATG2B-205ENST00000553643 ZNF692Q9BU19 519 aaPredicted RBP14.45□□□□□ -0.1
ATG2B-205ENST00000553643 FXR2P51116 673 aaKnown RBP eCLIP14.4□□□□□ -0.1
ATG2B-205ENST00000553643 CLEC11AQ9Y240 323 aa14.35□□□□□ -0.11
ATG2B-205ENST00000553643 SPDYE1Q8NFV5 336 aaPredicted RBP14.29□□□□□ -0.12
ATG2B-205ENST00000553643 PABPN1Q86U42 306 aaKnown RBP eCLIP14.25□□□□□ -0.13
ATG2B-205ENST00000553643 HAX1O00165 279 aa14.24□□□□□ -0.13
ATG2B-205ENST00000553643 SP7Q8TDD2 431 aaPredicted RBP14.23□□□□□ -0.13
ATG2B-205ENST00000553643 PRKAR2AP13861 404 aaKnown RBP14.2□□□□□ -0.14
ATG2B-205ENST00000553643 SPDYE4A6NLX3 237 aa14.15□□□□□ -0.14
ATG2B-205ENST00000553643 EVX2Q03828 476 aa14.15□□□□□ -0.14
ATG2B-205ENST00000553643 CHADLQ6NUI6 762 aa14.11□□□□□ -0.15
ATG2B-205ENST00000553643 PRR29P0C7W0 189 aa14.07□□□□□ -0.16
ATG2B-205ENST00000553643 C19orf67A6NJJ6 358 aa13.94□□□□□ -0.18
ATG2B-205ENST00000553643 PROM2Q8N271 834 aa13.91□□□□□ -0.18
ATG2B-205ENST00000553643 STAG3Q9UJ98 1225 aa13.91□□□□□ -0.18
ATG2B-205ENST00000553643 FARP1Q9Y4F1 1045 aaPredicted RBP13.83□□□□□ -0.2
ATG2B-205ENST00000553643 CREBZFQ9NS37 354 aa13.77□□□□□ -0.21
ATG2B-205ENST00000553643 GABBR2O75899 941 aa13.76□□□□□ -0.21
ATG2B-205ENST00000553643 CD44P16070 742 aaKnown RBP13.74□□□□□ -0.21
ATG2B-205ENST00000553643 FKBP8Q14318 412 aa13.73□□□□□ -0.21
ATG2B-205ENST00000553643 MNX1P50219 401 aaPredicted RBP13.59□□□□□ -0.23
ATG2B-205ENST00000553643 ZRANB1Q9UGI0 708 aa13.57□□□□□ -0.24
ATG2B-205ENST00000553643 POTEIP0CG38 1075 aa13.51□□□□□ -0.25
ATG2B-205ENST00000553643 NPM1P06748 294 aaKnown RBP eCLIP13.49□□□□□ -0.25
ATG2B-205ENST00000553643 ZNF579Q8NAF0 562 aaKnown RBP13.49□□□□□ -0.25
ATG2B-205ENST00000553643 MIER1Q8N108 512 aa13.44□□□□□ -0.26
ATG2B-205ENST00000553643 PHF12Q96QT6 1004 aa13.42□□□□□ -0.26
ATG2B-205ENST00000553643 GALR2O43603 387 aaPredicted RBP13.41□□□□□ -0.26
ATG2B-205ENST00000553643 PAK3O75914 559 aaPredicted RBP13.39□□□□□ -0.27
ATG2B-205ENST00000553643 PLEKHG5O94827 1062 aa13.39□□□□□ -0.27
ATG2B-205ENST00000553643 CLCN6P51797 869 aa13.38□□□□□ -0.27
ATG2B-205ENST00000553643 PLCD3Q8N3E9 789 aa13.38□□□□□ -0.27
ATG2B-205ENST00000553643 DCBLD2Q96PD2 775 aa13.37□□□□□ -0.27
ATG2B-205ENST00000553643 LHX8Q68G74 356 aa13.36□□□□□ -0.27
ATG2B-205ENST00000553643 FBXO3Q9UK99 471 aa13.36□□□□□ -0.27
ATG2B-205ENST00000553643 TSPYL2Q9H2G4 693 aaPredicted RBP13.3□□□□□ -0.28
ATG2B-205ENST00000553643 ZBTB47Q9UFB7 747 aaPredicted RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms