RNA–Protein interactions for RNA: ENST00000553038.5

ACTR6-213, Transcript of ARP6 actin related protein 6 homolog, humanhuman

TSL 1 (best)

Gene ACTR6, Length 2,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR6-213ENST00000553038 ERBB3P21860 1342 aa18.13■□□□□ 0.49
ACTR6-213ENST00000553038 BCL2L13Q9BXK5 485 aa18.13■□□□□ 0.49
ACTR6-213ENST00000553038 IFT57Q9NWB7 429 aa18.13■□□□□ 0.49
ACTR6-213ENST00000553038 RGPD2P0DJD1 1756 aa18.12■□□□□ 0.49
ACTR6-213ENST00000553038 RGPD5Q99666 1765 aa18.12■□□□□ 0.49
ACTR6-213ENST00000553038 CRYBG1Q9Y4K1 1723 aa18.11■□□□□ 0.49
ACTR6-213ENST00000553038 CPDO75976 1380 aa18.11■□□□□ 0.49
ACTR6-213ENST00000553038 GNAT3A8MTJ3 354 aa18.11■□□□□ 0.49
ACTR6-213ENST00000553038 UBAP1LF5GYI3 381 aa18.1■□□□□ 0.49
ACTR6-213ENST00000553038 TNNQ9UQP3 1299 aa18.1■□□□□ 0.49
ACTR6-213ENST00000553038 PLEKHO1Q53GL0 409 aaPredicted RBP18.1■□□□□ 0.49
ACTR6-213ENST00000553038 FRAT1Q92837 279 aaPredicted RBP18.1■□□□□ 0.49
ACTR6-213ENST00000553038 RAPGEF4Q8WZA2 1011 aa18.09■□□□□ 0.49
ACTR6-213ENST00000553038 CFAP44Q96MT7 982 aa18.09■□□□□ 0.49
ACTR6-213ENST00000553038 MBIPQ9NS73 344 aa18.09■□□□□ 0.49
ACTR6-213ENST00000553038 PANK1Q8TE04 598 aa18.08■□□□□ 0.49
ACTR6-213ENST00000553038 MAP3K5Q99683 1374 aa18.08■□□□□ 0.49
ACTR6-213ENST00000553038 ZNF530Q6P9A1 599 aaPredicted RBP18.08■□□□□ 0.48
ACTR6-213ENST00000553038 AHDC1Q5TGY3 1603 aaPredicted RBP18.07■□□□□ 0.48
ACTR6-213ENST00000553038 CT47B1P0C2W7 299 aaPredicted RBP18.07■□□□□ 0.48
ACTR6-213ENST00000553038 EVA1CP58658 441 aa18.07■□□□□ 0.48
ACTR6-213ENST00000553038 ABCC6O95255 1503 aa18.07■□□□□ 0.48
ACTR6-213ENST00000553038 ZNF853P0CG23 659 aa18.06■□□□□ 0.48
ACTR6-213ENST00000553038 AMOTQ4VCS5 1084 aa18.06■□□□□ 0.48
ACTR6-213ENST00000553038 C1orf141Q5JVX7 400 aa18.06■□□□□ 0.48
ACTR6-213ENST00000553038 STRN4Q9NRL3 753 aa18.06■□□□□ 0.48
ACTR6-213ENST00000553038 SMC4Q9NTJ3 1288 aa18.06■□□□□ 0.48
ACTR6-213ENST00000553038 HTATSF1O43719 755 aaKnown RBP18.06■□□□□ 0.48
ACTR6-213ENST00000553038 TOM1L2Q6ZVM7 507 aa18.06■□□□□ 0.48
ACTR6-213ENST00000553038 ABCA3Q99758 1704 aa18.06■□□□□ 0.48
ACTR6-213ENST00000553038 COL18A1P39060 1754 aa18.05■□□□□ 0.48
ACTR6-213ENST00000553038 ELL2O00472 640 aaPredicted RBP18.05■□□□□ 0.48
ACTR6-213ENST00000553038 TATP17735 454 aaPredicted RBP18.05■□□□□ 0.48
ACTR6-213ENST00000553038 PDE3AQ14432 1141 aa18.05■□□□□ 0.48
ACTR6-213ENST00000553038 SSH1Q8WYL5 1049 aa18.05■□□□□ 0.48
ACTR6-213ENST00000553038 PHLPP1O60346 1717 aa18.05■□□□□ 0.48
ACTR6-213ENST00000553038 RLBP1P12271 317 aa18.04■□□□□ 0.48
ACTR6-213ENST00000553038 TSPYL4Q9UJ04 414 aa18.04■□□□□ 0.48
ACTR6-213ENST00000553038 COG6Q9Y2V7 657 aa18.04■□□□□ 0.48
ACTR6-213ENST00000553038 MIS18AQ9NYP9 233 aa18.03■□□□□ 0.48
ACTR6-213ENST00000553038 TSPYL6Q8N831 410 aa18.03■□□□□ 0.48
ACTR6-213ENST00000553038 CAMTA1Q9Y6Y1 1673 aa18.02■□□□□ 0.48
ACTR6-213ENST00000553038 AKAP4Q5JQC9 854 aa18.02■□□□□ 0.48
ACTR6-213ENST00000553038 CRB1P82279 1406 aa18.02■□□□□ 0.47
ACTR6-213ENST00000553038 NCAPD2Q15021 1401 aa18.02■□□□□ 0.47
ACTR6-213ENST00000553038 FAM208AQ9UK61 1670 aaKnown RBP18.02■□□□□ 0.47
ACTR6-213ENST00000553038 TWISTNBQ3B726 338 aaPredicted RBP18.01■□□□□ 0.47
ACTR6-213ENST00000553038 CLUAP1Q96AJ1 413 aa18.01■□□□□ 0.47
ACTR6-213ENST00000553038 WDR17Q8IZU2 1322 aa18.01■□□□□ 0.47
ACTR6-213ENST00000553038 CHL1O00533 1208 aa18.01■□□□□ 0.47
ACTR6-213ENST00000553038 NUTM2BA6NNL0 878 aaPredicted RBP18■□□□□ 0.47
ACTR6-213ENST00000553038 NUTM2EB1AL46 878 aaPredicted RBP18■□□□□ 0.47
ACTR6-213ENST00000553038 VAMP4O75379 141 aa18■□□□□ 0.47
ACTR6-213ENST00000553038 NUTM2AQ8IVF1 878 aaPredicted RBP18■□□□□ 0.47
ACTR6-213ENST00000553038 IL17REQ8NFR9 667 aa18■□□□□ 0.47
ACTR6-213ENST00000553038 SPG7Q9UQ90 795 aa18■□□□□ 0.47
ACTR6-213ENST00000553038 MPRIPQ6WCQ1 1025 aa17.99■□□□□ 0.47
ACTR6-213ENST00000553038 C8orf58Q8NAV2 365 aa17.99■□□□□ 0.47
ACTR6-213ENST00000553038 COL5A2P05997 1499 aaPredicted RBP17.99■□□□□ 0.47
ACTR6-213ENST00000553038 ADAMTS2O95450 1211 aa17.99■□□□□ 0.47
ACTR6-213ENST00000553038 TEFQ10587 303 aa17.99■□□□□ 0.47
ACTR6-213ENST00000553038 BTG4Q9NY30 223 aa17.99■□□□□ 0.47
ACTR6-213ENST00000553038 LMO7Q8WWI1 1683 aa17.99■□□□□ 0.47
ACTR6-213ENST00000553038 ZKSCAN2Q63HK3 967 aa17.98■□□□□ 0.47
ACTR6-213ENST00000553038 NOB1Q9ULX3 412 aaKnown RBP17.98■□□□□ 0.47
ACTR6-213ENST00000553038 TCERG1O14776 1098 aaKnown RBP17.98■□□□□ 0.47
ACTR6-213ENST00000553038 TAF7Q15545 349 aaPredicted RBP17.98■□□□□ 0.47
ACTR6-213ENST00000553038 SKAP1Q86WV1 359 aa17.98■□□□□ 0.47
ACTR6-213ENST00000553038 FTSJ3Q8IY81 847 aaKnown RBP17.98■□□□□ 0.47
ACTR6-213ENST00000553038 USP35Q9P2H5 1018 aa17.98■□□□□ 0.47
ACTR6-213ENST00000553038 KDM2BQ8NHM5 1336 aa17.97■□□□□ 0.47
ACTR6-213ENST00000553038 ALDH1L2Q3SY69 923 aa17.97■□□□□ 0.47
ACTR6-213ENST00000553038 LARP1Q6PKG0 1096 aaKnown RBP17.97■□□□□ 0.47
ACTR6-213ENST00000553038 ZNF428Q96B54 188 aa17.97■□□□□ 0.47
ACTR6-213ENST00000553038 LGR6Q9HBX8 967 aa17.97■□□□□ 0.47
ACTR6-213ENST00000553038 COL16A1Q07092 1604 aaPredicted RBP17.97■□□□□ 0.47
ACTR6-213ENST00000553038 MEGF6O75095 1541 aa17.97■□□□□ 0.47
ACTR6-213ENST00000553038 CERKQ8TCT0 537 aa17.96■□□□□ 0.47
ACTR6-213ENST00000553038 TRIM27P14373 513 aa17.96■□□□□ 0.47
ACTR6-213ENST00000553038 KRT24Q2M2I5 525 aa17.96■□□□□ 0.47
ACTR6-213ENST00000553038 COL22A1Q8NFW1 1626 aaPredicted RBP17.95■□□□□ 0.46
ACTR6-213ENST00000553038 KIF16BQ96L93 1317 aa17.95■□□□□ 0.46
ACTR6-213ENST00000553038 IPO8O15397 1037 aaKnown RBP17.94■□□□□ 0.46
ACTR6-213ENST00000553038 RNMTO43148 476 aaKnown RBP17.94■□□□□ 0.46
ACTR6-213ENST00000553038 DZIP1LQ8IYY4 767 aaKnown RBP17.94■□□□□ 0.46
ACTR6-213ENST00000553038 CARD10Q9BWT7 1032 aa17.94■□□□□ 0.46
ACTR6-213ENST00000553038 LRRC37A3O60309 1634 aa17.94■□□□□ 0.46
ACTR6-213ENST00000553038 MS4A1P11836 297 aa17.93■□□□□ 0.46
ACTR6-213ENST00000553038 ATF7IPQ6VMQ6 1270 aa17.93■□□□□ 0.46
ACTR6-213ENST00000553038 IFNL2Q8IZJ0 200 aa17.93■□□□□ 0.46
ACTR6-213ENST00000553038 MRPL50Q8N5N7 158 aaKnown RBP17.93■□□□□ 0.46
ACTR6-213ENST00000553038 IGHDP01880 384 aa17.93■□□□□ 0.46
ACTR6-213ENST00000553038 CEMIPQ8WUJ3 1361 aa17.92■□□□□ 0.46
ACTR6-213ENST00000553038 COL14A1Q05707 1796 aaKnown RBP17.92■□□□□ 0.46
ACTR6-213ENST00000553038 BTBD11A6QL63 1104 aa17.92■□□□□ 0.46
ACTR6-213ENST00000553038 IL2RBP14784 551 aa17.92■□□□□ 0.46
ACTR6-213ENST00000553038 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.92■□□□□ 0.463e-6■■□□□ 13.5
ACTR6-213ENST00000553038 PHKG2P15735 406 aa17.91■□□□□ 0.46
ACTR6-213ENST00000553038 MVPQ14764 893 aaKnown RBP17.91■□□□□ 0.46
ACTR6-213ENST00000553038 CENPQQ7L2Z9 268 aaPredicted RBP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms