RNA–Protein interactions for RNA: ENST00000552433.1

LETMD1-233, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 727 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-233ENST00000552433 A0A1W2PRU2 124 aa11.17□□□□□ -0.62
LETMD1-233ENST00000552433 LYSMD3Q7Z3D4 306 aa11.17□□□□□ -0.62
LETMD1-233ENST00000552433 GDPD2Q9HCC8 539 aa11.17□□□□□ -0.62
LETMD1-233ENST00000552433 PRM3Q9NNZ6 103 aa11.17□□□□□ -0.62
LETMD1-233ENST00000552433 SENP3-EIF4A1A0A087X0R7 540 aa11.16□□□□□ -0.62
LETMD1-233ENST00000552433 RHOQP17081 205 aa11.16□□□□□ -0.62
LETMD1-233ENST00000552433 TSGA10IPQ3SY00 556 aa11.16□□□□□ -0.62
LETMD1-233ENST00000552433 VWA5B2Q8N398 1253 aa11.16□□□□□ -0.62
LETMD1-233ENST00000552433 CDCA7Q9BWT1 371 aaPredicted RBP11.16□□□□□ -0.62
LETMD1-233ENST00000552433 ITGA6P23229 1130 aa11.15□□□□□ -0.62
LETMD1-233ENST00000552433 ABL2P42684 1182 aa11.15□□□□□ -0.62
LETMD1-233ENST00000552433 VAC14Q08AM6 782 aa11.15□□□□□ -0.62
LETMD1-233ENST00000552433 CCDC125Q86Z20 511 aa11.15□□□□□ -0.62
LETMD1-233ENST00000552433 ZNF592Q92610 1267 aa11.15□□□□□ -0.62
LETMD1-233ENST00000552433 TRIM52Q96A61 297 aa11.15□□□□□ -0.62
LETMD1-233ENST00000552433 CCDC85AQ96PX6 553 aaPredicted RBP11.15□□□□□ -0.62
LETMD1-233ENST00000552433 ESF1Q9H501 851 aaKnown RBP11.15□□□□□ -0.62
LETMD1-233ENST00000552433 CDC14CA4D256 554 aa11.14□□□□□ -0.63
LETMD1-233ENST00000552433 RNF144AP50876 292 aaPredicted RBP11.14□□□□□ -0.63
LETMD1-233ENST00000552433 OSBPL3Q9H4L5 887 aa11.14□□□□□ -0.63
LETMD1-233ENST00000552433 KRT76Q01546 638 aa11.13□□□□□ -0.63
LETMD1-233ENST00000552433 CNTNAP3BQ96NU0 1288 aa11.13□□□□□ -0.63
LETMD1-233ENST00000552433 CNTNAP3Q9BZ76 1288 aa11.13□□□□□ -0.63
LETMD1-233ENST00000552433 NANOS1Q8WY41 292 aaKnown RBP11.12□□□□□ -0.63
LETMD1-233ENST00000552433 NLRP3Q96P20 1036 aa11.12□□□□□ -0.63
LETMD1-233ENST00000552433 TRAK2O60296 914 aa11.11□□□□□ -0.63
LETMD1-233ENST00000552433 EIF4G2P78344 907 aaKnown RBP eCLIP11.11□□□□□ -0.63
LETMD1-233ENST00000552433 CYP2U1Q7Z449 544 aa11.11□□□□□ -0.63
LETMD1-233ENST00000552433 COL25A1Q9BXS0 654 aaPredicted RBP11.11□□□□□ -0.63
LETMD1-233ENST00000552433 ARHGEF10LQ9HCE6 1279 aa11.11□□□□□ -0.63
LETMD1-233ENST00000552433 RAB6BQ9NRW1 208 aa11.11□□□□□ -0.63
LETMD1-233ENST00000552433 FAM181BA6NEQ2 426 aa11.1□□□□□ -0.63
LETMD1-233ENST00000552433 POU4F2Q12837 409 aa11.1□□□□□ -0.63
LETMD1-233ENST00000552433 SV2AQ7L0J3 742 aa11.1□□□□□ -0.63
LETMD1-233ENST00000552433 CUEDC1Q9NWM3 386 aaPredicted RBP11.1□□□□□ -0.63
LETMD1-233ENST00000552433 SLC27A3Q5K4L6 730 aa11.09□□□□□ -0.63
LETMD1-233ENST00000552433 RNFT1Q5M7Z0 435 aa11.09□□□□□ -0.63
LETMD1-233ENST00000552433 MCM6Q14566 821 aa11.08□□□□□ -0.64
LETMD1-233ENST00000552433 PHTF2Q8N3S3 785 aa11.08□□□□□ -0.64
LETMD1-233ENST00000552433 GPC1P35052 558 aa11.07□□□□□ -0.64
LETMD1-233ENST00000552433 CLN3Q13286 438 aa11.07□□□□□ -0.64
LETMD1-233ENST00000552433 MYCP01106 439 aaPredicted RBP11.06□□□□□ -0.64
LETMD1-233ENST00000552433 SLFNL1Q499Z3 407 aa11.06□□□□□ -0.64
LETMD1-233ENST00000552433 GRIP2Q9C0E4 1043 aa11.06□□□□□ -0.64
LETMD1-233ENST00000552433 RNF135Q8IUD6 432 aa11.05□□□□□ -0.64
LETMD1-233ENST00000552433 ARXQ96QS3 562 aa11.05□□□□□ -0.64
LETMD1-233ENST00000552433 DOLKQ9UPQ8 538 aa11.05□□□□□ -0.64
LETMD1-233ENST00000552433 STAU1O95793 577 aaKnown RBP11.04□□□□□ -0.64
LETMD1-233ENST00000552433 OXLD1Q5BKU9 147 aa11.04□□□□□ -0.64
LETMD1-233ENST00000552433 RIPOR1Q6ZS17 1223 aa11.04□□□□□ -0.64
LETMD1-233ENST00000552433 ERICH6Q7L0X2 663 aa11.04□□□□□ -0.64
LETMD1-233ENST00000552433 CNKSR1Q969H4 720 aa11.04□□□□□ -0.64
LETMD1-233ENST00000552433 GAS2L1Q99501 681 aaPredicted RBP11.04□□□□□ -0.64
LETMD1-233ENST00000552433 GNRH1P01148 92 aa11.03□□□□□ -0.64
LETMD1-233ENST00000552433 IL2RAP01589 272 aa11.03□□□□□ -0.64
LETMD1-233ENST00000552433 CENPCQ03188 943 aa11.03□□□□□ -0.64
LETMD1-233ENST00000552433 COG6Q9Y2V7 657 aa11.03□□□□□ -0.64
LETMD1-233ENST00000552433 WASHC4Q2M389 1173 aa11.02□□□□□ -0.65
LETMD1-233ENST00000552433 NBPF10Q6P3W6 841 aaKnown RBP11.02□□□□□ -0.65
LETMD1-233ENST00000552433 NBPF15Q8N660 670 aa11.02□□□□□ -0.65
LETMD1-233ENST00000552433 USP4Q13107 963 aa11.01□□□□□ -0.65
LETMD1-233ENST00000552433 SEMA3FQ13275 785 aa11.01□□□□□ -0.65
LETMD1-233ENST00000552433 DBN1Q16643 649 aa11.01□□□□□ -0.65
LETMD1-233ENST00000552433 ESYT1Q9BSJ8 1104 aa11.01□□□□□ -0.65
LETMD1-233ENST00000552433 PHKA2P46019 1235 aa11□□□□□ -0.65
LETMD1-233ENST00000552433 POM121Q96HA1 1249 aa11□□□□□ -0.65
LETMD1-233ENST00000552433 GPR25O00155 361 aa10.99□□□□□ -0.65
LETMD1-233ENST00000552433 XAGE2Q96GT9 111 aa10.99□□□□□ -0.65
LETMD1-233ENST00000552433 TIMMDC1Q9NPL8 285 aa10.99□□□□□ -0.65
LETMD1-233ENST00000552433 DYRK1BQ9Y463 629 aa10.99□□□□□ -0.65
LETMD1-233ENST00000552433 SPATA31C2B4DYI2 1134 aa10.98□□□□□ -0.65
LETMD1-233ENST00000552433 WASLO00401 505 aaPredicted RBP10.98□□□□□ -0.65
LETMD1-233ENST00000552433 TRIM22Q8IYM9 498 aa10.98□□□□□ -0.65
LETMD1-233ENST00000552433 WHAMMQ8TF30 809 aa10.98□□□□□ -0.65
LETMD1-233ENST00000552433 ZNF837Q96EG3 531 aaPredicted RBP10.98□□□□□ -0.65
LETMD1-233ENST00000552433 TAS1R3Q7RTX0 852 aa10.97□□□□□ -0.65
LETMD1-233ENST00000552433 ZSCAN10Q96SZ4 725 aaPredicted RBP10.97□□□□□ -0.65
LETMD1-233ENST00000552433 CHIC2Q9UKJ5 165 aa10.97□□□□□ -0.65
LETMD1-233ENST00000552433 HRH3Q9Y5N1 445 aa10.97□□□□□ -0.65
LETMD1-233ENST00000552433 GAS6Q14393 721 aa10.96□□□□□ -0.65
LETMD1-233ENST00000552433 PLPP7Q8NBV4 271 aa10.96□□□□□ -0.65
LETMD1-233ENST00000552433 ETNK1Q9HBU6 452 aa10.96□□□□□ -0.65
LETMD1-233ENST00000552433 PIK3CDO00329 1044 aa10.95□□□□□ -0.66
LETMD1-233ENST00000552433 ZNF385CQ66K41 422 aaPredicted RBP10.95□□□□□ -0.66
LETMD1-233ENST00000552433 GTPBP3Q969Y2 492 aaKnown RBP10.95□□□□□ -0.66
LETMD1-233ENST00000552433 ESCO1Q5FWF5 840 aa10.94□□□□□ -0.66
LETMD1-233ENST00000552433 TMEM214Q6NUQ4 689 aaKnown RBP10.94□□□□□ -0.66
LETMD1-233ENST00000552433 FHDC1Q9C0D6 1143 aaPredicted RBP10.94□□□□□ -0.66
LETMD1-233ENST00000552433 ADAMTS2O95450 1211 aa10.93□□□□□ -0.66
LETMD1-233ENST00000552433 SLURP2P0DP57 97 aa10.93□□□□□ -0.66
LETMD1-233ENST00000552433 SVOPQ8N4V2 548 aa10.93□□□□□ -0.66
LETMD1-233ENST00000552433 GPAMQ9HCL2 828 aa10.93□□□□□ -0.66
LETMD1-233ENST00000552433 H7C1W4 665 aa10.92□□□□□ -0.66
LETMD1-233ENST00000552433 F11P03951 625 aa10.92□□□□□ -0.66
LETMD1-233ENST00000552433 SOX11P35716 441 aa10.92□□□□□ -0.66
LETMD1-233ENST00000552433 MAP7D1Q3KQU3 841 aa10.92□□□□□ -0.66
LETMD1-233ENST00000552433 WDR44Q5JSH3 913 aa10.92□□□□□ -0.66
LETMD1-233ENST00000552433 FOXR1Q6PIV2 292 aa10.92□□□□□ -0.66
LETMD1-233ENST00000552433 SIRT1Q96EB6 747 aa10.92□□□□□ -0.66
LETMD1-233ENST00000552433 ADAMTS8Q9UP79 889 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms