RNA–Protein interactions for RNA: ENST00000552428.6

R3HDM2-214, Transcript of R3H domain containing 2, humanhuman

TSL 5

Gene R3HDM2, Length 430 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-214ENST00000552428 PTCRAQ6ISU1 281 aaPredicted RBP8.66□□□□□ -1.02
R3HDM2-214ENST00000552428 BPHLQ86WA6 291 aaPredicted RBP8.66□□□□□ -1.02
R3HDM2-214ENST00000552428 SPNS2Q8IVW8 549 aa8.66□□□□□ -1.02
R3HDM2-214ENST00000552428 TPCN2Q8NHX9 752 aa8.66□□□□□ -1.02
R3HDM2-214ENST00000552428 CARD14Q9BXL6 1004 aa8.66□□□□□ -1.02
R3HDM2-214ENST00000552428 H3BRB1 525 aa8.65□□□□□ -1.02
R3HDM2-214ENST00000552428 ICMTO60725 284 aa8.65□□□□□ -1.02
R3HDM2-214ENST00000552428 NBPF20Q3BBV1 942 aa8.65□□□□□ -1.02
R3HDM2-214ENST00000552428 ERFEQ4G0M1 354 aa8.65□□□□□ -1.02
R3HDM2-214ENST00000552428 CCDC24Q8N4L8 307 aa8.65□□□□□ -1.02
R3HDM2-214ENST00000552428 SLC10A4Q96EP9 437 aa8.65□□□□□ -1.02
R3HDM2-214ENST00000552428 PRIMPOLQ96LW4 560 aa8.65□□□□□ -1.02
R3HDM2-214ENST00000552428 TUT1Q9H6E5 874 aaKnown RBP8.65□□□□□ -1.02
R3HDM2-214ENST00000552428 PCDHGA11Q9Y5H2 935 aa8.65□□□□□ -1.02
R3HDM2-214ENST00000552428 SFI1A8K8P3 1242 aa8.64□□□□□ -1.03
R3HDM2-214ENST00000552428 TLL1O43897 1013 aa8.64□□□□□ -1.03
R3HDM2-214ENST00000552428 ZPR1O75312 459 aa8.64□□□□□ -1.03
R3HDM2-214ENST00000552428 ABL1P00519 1130 aa8.64□□□□□ -1.03
R3HDM2-214ENST00000552428 PSME1Q06323 249 aa8.64□□□□□ -1.03
R3HDM2-214ENST00000552428 USP4Q13107 963 aa8.64□□□□□ -1.03
R3HDM2-214ENST00000552428 NYAP1Q6ZVC0 841 aa8.64□□□□□ -1.03
R3HDM2-214ENST00000552428 SEPT12Q8IYM1 358 aa8.64□□□□□ -1.03
R3HDM2-214ENST00000552428 GIPC2Q8TF65 315 aa8.64□□□□□ -1.03
R3HDM2-214ENST00000552428 ESPNB1AK53 854 aa8.63□□□□□ -1.03
R3HDM2-214ENST00000552428 M0R2N6 131 aa8.63□□□□□ -1.03
R3HDM2-214ENST00000552428 C21orf2O43822 256 aa8.63□□□□□ -1.03
R3HDM2-214ENST00000552428 GLYCTKQ8IVS8 523 aa8.63□□□□□ -1.03
R3HDM2-214ENST00000552428 CDV3Q9UKY7 258 aaKnown RBP8.63□□□□□ -1.03
R3HDM2-214ENST00000552428 SHROOM4Q9ULL8 1493 aa8.63□□□□□ -1.03
R3HDM2-214ENST00000552428 ZNF211Q13398 564 aaPredicted RBP8.62□□□□□ -1.03
R3HDM2-214ENST00000552428 AGERQ15109 404 aa8.62□□□□□ -1.03
R3HDM2-214ENST00000552428 ZNF326Q5BKZ1 582 aaKnown RBP8.62□□□□□ -1.03
R3HDM2-214ENST00000552428 ZNF511Q8NB15 262 aa8.62□□□□□ -1.03
R3HDM2-214ENST00000552428 C1QTNF2Q9BXJ5 285 aa8.62□□□□□ -1.03
R3HDM2-214ENST00000552428 NISCHQ9Y2I1 1504 aa8.61□□□□□ -1.03
R3HDM2-214ENST00000552428 VAMP1P23763 118 aa8.61□□□□□ -1.03
R3HDM2-214ENST00000552428 WEE1P30291 646 aa8.61□□□□□ -1.03
R3HDM2-214ENST00000552428 SF3B2Q13435 895 aaKnown RBP8.61□□□□□ -1.03
R3HDM2-214ENST00000552428 C4orf48Q5BLP8 95 aa8.61□□□□□ -1.03
R3HDM2-214ENST00000552428 TRMT44Q8IYL2 757 aaKnown RBP8.61□□□□□ -1.03
R3HDM2-214ENST00000552428 BAP1Q92560 729 aa8.61□□□□□ -1.03
R3HDM2-214ENST00000552428 FOXJ1Q92949 421 aa8.61□□□□□ -1.03
R3HDM2-214ENST00000552428 SLC6A16Q9GZN6 736 aa8.61□□□□□ -1.03
R3HDM2-214ENST00000552428 PCDHB11Q9Y5F2 797 aa8.61□□□□□ -1.03
R3HDM2-214ENST00000552428 PTCD1O75127 700 aaKnown RBP8.6□□□□□ -1.03
R3HDM2-214ENST00000552428 THSD4Q6ZMP0 1018 aa8.6□□□□□ -1.03
R3HDM2-214ENST00000552428 ASB16Q96NS5 453 aa8.6□□□□□ -1.03
R3HDM2-214ENST00000552428 HINFPQ9BQA5 517 aa8.6□□□□□ -1.03
R3HDM2-214ENST00000552428 DCTN4Q9UJW0 460 aa8.6□□□□□ -1.03
R3HDM2-214ENST00000552428 FBXO33Q7Z6M2 555 aa8.59□□□□□ -1.03
R3HDM2-214ENST00000552428 GTF3C2Q8WUA4 911 aaPredicted RBP8.59□□□□□ -1.03
R3HDM2-214ENST00000552428 COL26A1Q96A83 441 aa8.59□□□□□ -1.03
R3HDM2-214ENST00000552428 TCF3P15923 654 aa8.58□□□□□ -1.04
R3HDM2-214ENST00000552428 MAPK1P28482 360 aa8.58□□□□□ -1.04
R3HDM2-214ENST00000552428 FKBP4Q02790 459 aaKnown RBP eCLIP8.58□□□□□ -1.04
R3HDM2-214ENST00000552428 COL19A1Q14993 1142 aa8.58□□□□□ -1.04
R3HDM2-214ENST00000552428 LINC01559Q495D7 138 aa8.58□□□□□ -1.04
R3HDM2-214ENST00000552428 ZSCAN29Q8IWY8 852 aaPredicted RBP8.58□□□□□ -1.04
R3HDM2-214ENST00000552428 MTRQ99707 1265 aa8.58□□□□□ -1.04
R3HDM2-214ENST00000552428 ANO2Q9NQ90 1003 aa8.58□□□□□ -1.04
R3HDM2-214ENST00000552428 USP35Q9P2H5 1018 aa8.58□□□□□ -1.04
R3HDM2-214ENST00000552428 MYCP01106 439 aaPredicted RBP8.57□□□□□ -1.04
R3HDM2-214ENST00000552428 MMRN1Q13201 1228 aa8.57□□□□□ -1.04
R3HDM2-214ENST00000552428 FKBP5Q13451 457 aaPredicted RBP8.57□□□□□ -1.04
R3HDM2-214ENST00000552428 ECM1Q16610 540 aa8.57□□□□□ -1.04
R3HDM2-214ENST00000552428 TSEN2Q8NCE0 465 aaKnown RBP8.57□□□□□ -1.04
R3HDM2-214ENST00000552428 SEPT3Q9UH03 358 aa8.57□□□□□ -1.04
R3HDM2-214ENST00000552428 DNMT3AQ9Y6K1 912 aaPredicted RBP8.57□□□□□ -1.04
R3HDM2-214ENST00000552428 MKNK1Q9BUB5 465 aa8.56□□□□□ -1.04
R3HDM2-214ENST00000552428 FOXO3O43524 673 aa8.55□□□□□ -1.04
R3HDM2-214ENST00000552428 ARHGAP4P98171 946 aa8.55□□□□□ -1.04
R3HDM2-214ENST00000552428 HELQQ8TDG4 1101 aa8.55□□□□□ -1.04
R3HDM2-214ENST00000552428 IL21Q9HBE4 155 aa8.55□□□□□ -1.04
R3HDM2-214ENST00000552428 LGR5O75473 907 aa8.54□□□□□ -1.04
R3HDM2-214ENST00000552428 IGFBP4P22692 258 aa8.54□□□□□ -1.04
R3HDM2-214ENST00000552428 RGL4Q8IZJ4 473 aa8.54□□□□□ -1.04
R3HDM2-214ENST00000552428 FCF1Q9Y324 198 aaKnown RBP8.54□□□□□ -1.04
R3HDM2-214ENST00000552428 SH3BP2P78314 561 aa8.53□□□□□ -1.04
R3HDM2-214ENST00000552428 TJAP1Q5JTD0 557 aa8.53□□□□□ -1.04
R3HDM2-214ENST00000552428 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.53□□□□□ -1.04
R3HDM2-214ENST00000552428 KCTD15Q96SI1 283 aaPredicted RBP8.53□□□□□ -1.04
R3HDM2-214ENST00000552428 ZNF358Q9NW07 568 aa8.53□□□□□ -1.04
R3HDM2-214ENST00000552428 MAP4K5Q9Y4K4 846 aa8.53□□□□□ -1.04
R3HDM2-214ENST00000552428 NPR3P17342 541 aa8.52□□□□□ -1.05
R3HDM2-214ENST00000552428 CAPN12Q6ZSI9 719 aa8.52□□□□□ -1.05
R3HDM2-214ENST00000552428 PURBQ96QR8 312 aaKnown RBP8.52□□□□□ -1.05
R3HDM2-214ENST00000552428 WASLO00401 505 aaPredicted RBP8.51□□□□□ -1.05
R3HDM2-214ENST00000552428 FAM13AO94988 1023 aa8.51□□□□□ -1.05
R3HDM2-214ENST00000552428 S1PR4O95977 384 aa8.51□□□□□ -1.05
R3HDM2-214ENST00000552428 MTMR3Q13615 1198 aa8.51□□□□□ -1.05
R3HDM2-214ENST00000552428 RNF166Q96A37 237 aaPredicted RBP8.51□□□□□ -1.05
R3HDM2-214ENST00000552428 TRIM52Q96A61 297 aa8.51□□□□□ -1.05
R3HDM2-214ENST00000552428 C8orf37Q96NL8 207 aa8.51□□□□□ -1.05
R3HDM2-214ENST00000552428 MYO15BQ96JP2 1530 aa8.5□□□□□ -1.05
R3HDM2-214ENST00000552428 TMEM229AB2RXF0 380 aa8.5□□□□□ -1.05
R3HDM2-214ENST00000552428 BACH1O14867 736 aa8.5□□□□□ -1.05
R3HDM2-214ENST00000552428 RECKO95980 971 aa8.5□□□□□ -1.05
R3HDM2-214ENST00000552428 ERVK-9P63128 1117 aa8.5□□□□□ -1.05
R3HDM2-214ENST00000552428 EAPPQ56P03 285 aaPredicted RBP8.5□□□□□ -1.05
R3HDM2-214ENST00000552428 INTS6LQ5JSJ4 861 aaKnown RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms