RNA–Protein interactions for RNA: ENST00000552428.6

R3HDM2-214, Transcript of R3H domain containing 2, humanhuman

TSL 5

Gene R3HDM2, Length 430 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-214ENST00000552428 AEBP2Q6ZN18 517 aaPredicted RBP19.99■□□□□ 0.79
R3HDM2-214ENST00000552428 CHIC1Q5VXU3 224 aa19.94■□□□□ 0.78
R3HDM2-214ENST00000552428 PHF23Q9BUL5 403 aaPredicted RBP17.59■□□□□ 0.41
R3HDM2-214ENST00000552428 SENP3Q9H4L4 574 aaPredicted RBP17.08■□□□□ 0.32
R3HDM2-214ENST00000552428 PLPPR3Q6T4P5 718 aa16.54■□□□□ 0.24
R3HDM2-214ENST00000552428 FOXD1Q16676 465 aa15.81■□□□□ 0.12
R3HDM2-214ENST00000552428 ADRA2BP18089 450 aa15.4■□□□□ 0.06
R3HDM2-214ENST00000552428 PPP6R1Q9UPN7 881 aa15.24■□□□□ 0.03
R3HDM2-214ENST00000552428 KCNA4P22459 653 aa15.16■□□□□ 0.02
R3HDM2-214ENST00000552428 EHMT2Q96KQ7 1210 aa15.02■□□□□ -0
R3HDM2-214ENST00000552428 PIAS4Q8N2W9 510 aaPredicted RBP14.9□□□□□ -0.02
R3HDM2-214ENST00000552428 MSH5O43196 834 aa14.7□□□□□ -0.06
R3HDM2-214ENST00000552428 PPP4R3CPQ6ZMV5 832 aa14.64□□□□□ -0.07
R3HDM2-214ENST00000552428 SLC4A1APQ9BWU0 796 aaKnown RBP14.59□□□□□ -0.07
R3HDM2-214ENST00000552428 NCBP3Q53F19 620 aaKnown RBP14.51□□□□□ -0.09
R3HDM2-214ENST00000552428 CSRNP3Q8WYN3 585 aa14.51□□□□□ -0.09
R3HDM2-214ENST00000552428 NPM3O75607 178 aaKnown RBP14.27□□□□□ -0.13
R3HDM2-214ENST00000552428 CNKSR2Q8WXI2 1034 aa14.09□□□□□ -0.15
R3HDM2-214ENST00000552428 SCAF1Q9H7N4 1312 aaKnown RBP14.02□□□□□ -0.17
R3HDM2-214ENST00000552428 ZBTB22O15209 634 aa13.97□□□□□ -0.17
R3HDM2-214ENST00000552428 DNAJC5BQ9UF47 199 aa13.84□□□□□ -0.19
R3HDM2-214ENST00000552428 FOXD4L1Q9NU39 408 aa13.77□□□□□ -0.21
R3HDM2-214ENST00000552428 MAPK8IP2Q13387 824 aaPredicted RBP13.73□□□□□ -0.21
R3HDM2-214ENST00000552428 RNF216Q9NWF9 866 aaPredicted RBP13.63□□□□□ -0.23
R3HDM2-214ENST00000552428 DMRT2Q9Y5R5 561 aa13.58□□□□□ -0.24
R3HDM2-214ENST00000552428 POTEDQ86YR6 584 aa13.52□□□□□ -0.25
R3HDM2-214ENST00000552428 HOXD11P31277 338 aaPredicted RBP13.37□□□□□ -0.27
R3HDM2-214ENST00000552428 AMER1Q5JTC6 1135 aaPredicted RBP13.31□□□□□ -0.28
R3HDM2-214ENST00000552428 SLC4A2P04920 1241 aa13.28□□□□□ -0.28
R3HDM2-214ENST00000552428 ATXN8OSP0DMR3 200 aa13.26□□□□□ -0.29
R3HDM2-214ENST00000552428 RTN4Q9NQC3 1192 aaKnown RBP13.25□□□□□ -0.29
R3HDM2-214ENST00000552428 SLC24A1O60721 1099 aa13.24□□□□□ -0.29
R3HDM2-214ENST00000552428 MYCNP04198 464 aaPredicted RBP13.2□□□□□ -0.3
R3HDM2-214ENST00000552428 FKBP8Q14318 412 aa13.07□□□□□ -0.32
R3HDM2-214ENST00000552428 DCAF8L1A6NGE4 600 aa13.03□□□□□ -0.32
R3HDM2-214ENST00000552428 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.75□□□□□ -0.37
R3HDM2-214ENST00000552428 HNRNPUL2Q1KMD3 747 aaKnown RBP12.75□□□□□ -0.37
R3HDM2-214ENST00000552428 ATF5Q9Y2D1 282 aaPredicted RBP12.74□□□□□ -0.37
R3HDM2-214ENST00000552428 SAMD1Q6SPF0 538 aaPredicted RBP12.72□□□□□ -0.37
R3HDM2-214ENST00000552428 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.7□□□□□ -0.387e-7■■■□□ 16.2
R3HDM2-214ENST00000552428 U3KPZ7 1027 aaPredicted RBP12.6□□□□□ -0.39
R3HDM2-214ENST00000552428 RNF39Q9H2S5 420 aa12.54□□□□□ -0.4
R3HDM2-214ENST00000552428 ZNF219Q9P2Y4 722 aaPredicted RBP12.47□□□□□ -0.41
R3HDM2-214ENST00000552428 APLP2Q06481 763 aa12.44□□□□□ -0.42
R3HDM2-214ENST00000552428 C1QBPQ07021 282 aaKnown RBP12.44□□□□□ -0.42
R3HDM2-214ENST00000552428 FBXO3Q9UK99 471 aa12.44□□□□□ -0.42
R3HDM2-214ENST00000552428 SPDYE4A6NLX3 237 aa12.34□□□□□ -0.43
R3HDM2-214ENST00000552428 CACNB1Q02641 598 aaPredicted RBP12.34□□□□□ -0.43
R3HDM2-214ENST00000552428 PROM2Q8N271 834 aa12.3□□□□□ -0.44
R3HDM2-214ENST00000552428 PLCB2Q00722 1185 aa12.24□□□□□ -0.45
R3HDM2-214ENST00000552428 MKRN4PQ13434 485 aaPredicted RBP12.24□□□□□ -0.45
R3HDM2-214ENST00000552428 VASPP50552 380 aaPredicted RBP12.23□□□□□ -0.45
R3HDM2-214ENST00000552428 FBLN2P98095 1184 aa12.19□□□□□ -0.46
R3HDM2-214ENST00000552428 IFNLR1Q8IU57 520 aaPredicted RBP12.11□□□□□ -0.47
R3HDM2-214ENST00000552428 CAPN15O75808 1086 aa12.09□□□□□ -0.47
R3HDM2-214ENST00000552428 SPINK5Q9NQ38 1064 aaPredicted RBP12.07□□□□□ -0.48
R3HDM2-214ENST00000552428 TRHP20396 242 aaPredicted RBP12.02□□□□□ -0.49
R3HDM2-214ENST00000552428 HAP1P54257 671 aaPredicted RBP12.02□□□□□ -0.49
R3HDM2-214ENST00000552428 POLA2Q14181 598 aa12.02□□□□□ -0.49
R3HDM2-214ENST00000552428 DCAF8L2P0C7V8 631 aa12.01□□□□□ -0.49
R3HDM2-214ENST00000552428 PKD2Q13563 968 aa12□□□□□ -0.49
R3HDM2-214ENST00000552428 ZBTB12Q9Y330 459 aaPredicted RBP11.95□□□□□ -0.5
R3HDM2-214ENST00000552428 BCANQ96GW7 911 aa11.92□□□□□ -0.5
R3HDM2-214ENST00000552428 VSIG10Q8N0Z9 540 aa11.91□□□□□ -0.5
R3HDM2-214ENST00000552428 DSG3P32926 999 aa11.88□□□□□ -0.51
R3HDM2-214ENST00000552428 SPOCK2Q92563 424 aa11.85□□□□□ -0.51
R3HDM2-214ENST00000552428 BBXQ8WY36 941 aaPredicted RBP11.81□□□□□ -0.52
R3HDM2-214ENST00000552428 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.81□□□□□ -0.52
R3HDM2-214ENST00000552428 ABCB7O75027 752 aa11.8□□□□□ -0.52
R3HDM2-214ENST00000552428 KLHL34Q8N239 644 aa11.8□□□□□ -0.52
R3HDM2-214ENST00000552428 ECM2O94769 699 aaPredicted RBP11.79□□□□□ -0.52
R3HDM2-214ENST00000552428 STAG3Q9UJ98 1225 aa11.79□□□□□ -0.52
R3HDM2-214ENST00000552428 TAOK2Q9UL54 1235 aa11.73□□□□□ -0.53
R3HDM2-214ENST00000552428 ZNF692Q9BU19 519 aaPredicted RBP11.71□□□□□ -0.53
R3HDM2-214ENST00000552428 NPM1P06748 294 aaKnown RBP eCLIP11.7□□□□□ -0.54
R3HDM2-214ENST00000552428 PAXIP1Q6ZW49 1069 aaPredicted RBP11.69□□□□□ -0.54
R3HDM2-214ENST00000552428 SPDYE2BA6NHP3 402 aa11.68□□□□□ -0.54
R3HDM2-214ENST00000552428 SPDYE6P0CI01 402 aa11.68□□□□□ -0.54
R3HDM2-214ENST00000552428 SPDYE2Q495Y8 402 aa11.68□□□□□ -0.54
R3HDM2-214ENST00000552428 PLCD3Q8N3E9 789 aa11.68□□□□□ -0.54
R3HDM2-214ENST00000552428 KDM2AQ9Y2K7 1162 aa11.67□□□□□ -0.54
R3HDM2-214ENST00000552428 PRKCSHP14314 528 aaPredicted RBP11.66□□□□□ -0.54
R3HDM2-214ENST00000552428 SSUH2Q9Y2M2 353 aa11.66□□□□□ -0.54
R3HDM2-214ENST00000552428 CFAP44Q96MT7 982 aa11.65□□□□□ -0.54
R3HDM2-214ENST00000552428 RGL2O15211 777 aa11.64□□□□□ -0.55
R3HDM2-214ENST00000552428 OSCARQ8IYS5 282 aa11.6□□□□□ -0.55
R3HDM2-214ENST00000552428 MIER1Q8N108 512 aa11.6□□□□□ -0.55
R3HDM2-214ENST00000552428 SPRYD3Q8NCJ5 442 aa11.59□□□□□ -0.55
R3HDM2-214ENST00000552428 PABPN1Q86U42 306 aaKnown RBP eCLIP11.58□□□□□ -0.56
R3HDM2-214ENST00000552428 ZBTB47Q9UFB7 747 aaPredicted RBP11.55□□□□□ -0.56
R3HDM2-214ENST00000552428 PLEKHG5O94827 1062 aa11.53□□□□□ -0.56
R3HDM2-214ENST00000552428 TPRNQ4KMQ1 711 aa11.53□□□□□ -0.56
R3HDM2-214ENST00000552428 TRIM41Q8WV44 630 aa11.51□□□□□ -0.57
R3HDM2-214ENST00000552428 TSHZ2Q9NRE2 1034 aa11.5□□□□□ -0.57
R3HDM2-214ENST00000552428 CIZ1Q9ULV3 898 aaPredicted RBP11.5□□□□□ -0.57
R3HDM2-214ENST00000552428 CHGAP10645 457 aaKnown RBP11.49□□□□□ -0.57
R3HDM2-214ENST00000552428 DNAJC5Q9H3Z4 198 aa11.43□□□□□ -0.58
R3HDM2-214ENST00000552428 HS6ST3Q8IZP7 471 aa11.42□□□□□ -0.58
R3HDM2-214ENST00000552428 RBM42Q9BTD8 480 aaKnown RBP11.4□□□□□ -0.58
R3HDM2-214ENST00000552428 GSE1Q14687 1217 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms