RNA–Protein interactions for RNA: ENST00000551465.1

R3HDM2-213, Transcript of R3H domain containing 2, humanhuman

TSL 2

Gene R3HDM2, Length 609 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-213ENST00000551465 NR1H3Q13133 447 aa8.23□□□□□ -1.09
R3HDM2-213ENST00000551465 SPINT1O43278 529 aa8.22□□□□□ -1.09
R3HDM2-213ENST00000551465 DEKP35659 375 aaKnown RBP8.22□□□□□ -1.09
R3HDM2-213ENST00000551465 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.22□□□□□ -1.096e-6■□□□□ 8.6
R3HDM2-213ENST00000551465 LILRA1O75019 489 aa8.21□□□□□ -1.1
R3HDM2-213ENST00000551465 ZNF330Q9Y3S2 320 aaPredicted RBP8.21□□□□□ -1.1
R3HDM2-213ENST00000551465 APBB1O00213 710 aa8.2□□□□□ -1.1
R3HDM2-213ENST00000551465 ADH1AP07327 375 aa8.2□□□□□ -1.1
R3HDM2-213ENST00000551465 PTGIRP43119 386 aa8.2□□□□□ -1.1
R3HDM2-213ENST00000551465 PTSQ03393 145 aa8.2□□□□□ -1.1
R3HDM2-213ENST00000551465 TBC1D2BQ9UPU7 963 aa8.2□□□□□ -1.1
R3HDM2-213ENST00000551465 SEPT12Q8IYM1 358 aa8.19□□□□□ -1.1
R3HDM2-213ENST00000551465 ESF1Q9H501 851 aaKnown RBP8.19□□□□□ -1.1
R3HDM2-213ENST00000551465 PDIA4P13667 645 aaKnown RBP8.18□□□□□ -1.1
R3HDM2-213ENST00000551465 PRM3Q9NNZ6 103 aa8.18□□□□□ -1.1
R3HDM2-213ENST00000551465 PCDHB11Q9Y5F2 797 aa8.18□□□□□ -1.1
R3HDM2-213ENST00000551465 MEN1O00255 615 aa8.17□□□□□ -1.1
R3HDM2-213ENST00000551465 RNF20Q5VTR2 975 aa8.17□□□□□ -1.1
R3HDM2-213ENST00000551465 GPR37L1O60883 481 aa8.16□□□□□ -1.1
R3HDM2-213ENST00000551465 LORP23490 312 aaPredicted RBP8.16□□□□□ -1.1
R3HDM2-213ENST00000551465 MCCD1P59942 119 aaPredicted RBP8.16□□□□□ -1.1
R3HDM2-213ENST00000551465 PDE4CQ08493 712 aa8.16□□□□□ -1.1
R3HDM2-213ENST00000551465 ZNF326Q5BKZ1 582 aaKnown RBP8.16□□□□□ -1.1
R3HDM2-213ENST00000551465 PRICKLE2Q7Z3G6 844 aa8.16□□□□□ -1.1
R3HDM2-213ENST00000551465 KDF1Q8NAX2 398 aaPredicted RBP8.16□□□□□ -1.1
R3HDM2-213ENST00000551465 RBM19Q9Y4C8 960 aaKnown RBP8.16□□□□□ -1.1
R3HDM2-213ENST00000551465 ATP5J2-PTCD1G3V325 749 aa8.15□□□□□ -1.1
R3HDM2-213ENST00000551465 VSIG8P0DPA2 414 aa8.15□□□□□ -1.1
R3HDM2-213ENST00000551465 ABL2P42684 1182 aa8.15□□□□□ -1.1
R3HDM2-213ENST00000551465 CCDC155Q8N6L0 562 aa8.15□□□□□ -1.1
R3HDM2-213ENST00000551465 RNF217Q8TC41 542 aa8.15□□□□□ -1.1
R3HDM2-213ENST00000551465 GDPD2Q9HCC8 539 aa8.15□□□□□ -1.1
R3HDM2-213ENST00000551465 RHOQP17081 205 aa8.14□□□□□ -1.11
R3HDM2-213ENST00000551465 CC2D2BQ6DHV5 1058 aa8.14□□□□□ -1.11
R3HDM2-213ENST00000551465 TRIM52Q96A61 297 aa8.14□□□□□ -1.11
R3HDM2-213ENST00000551465 CEP126Q9P2H0 1117 aa8.14□□□□□ -1.11
R3HDM2-213ENST00000551465 A0A1W2PRU2 124 aa8.13□□□□□ -1.11
R3HDM2-213ENST00000551465 CDC14CA4D256 554 aa8.13□□□□□ -1.11
R3HDM2-213ENST00000551465 SCTRP47872 440 aa8.13□□□□□ -1.11
R3HDM2-213ENST00000551465 VAC14Q08AM6 782 aa8.13□□□□□ -1.11
R3HDM2-213ENST00000551465 FOXD4L5Q5VV16 416 aaPredicted RBP8.13□□□□□ -1.11
R3HDM2-213ENST00000551465 VWA5B2Q8N398 1253 aa8.13□□□□□ -1.11
R3HDM2-213ENST00000551465 GPR161Q8N6U8 529 aaKnown RBP8.13□□□□□ -1.11
R3HDM2-213ENST00000551465 ZNF592Q92610 1267 aa8.13□□□□□ -1.11
R3HDM2-213ENST00000551465 SLC35F4A4IF30 521 aa8.12□□□□□ -1.11
R3HDM2-213ENST00000551465 SOCS7O14512 581 aa8.12□□□□□ -1.11
R3HDM2-213ENST00000551465 TAF7LQ5H9L4 462 aa8.12□□□□□ -1.11
R3HDM2-213ENST00000551465 LYSMD3Q7Z3D4 306 aa8.12□□□□□ -1.11
R3HDM2-213ENST00000551465 NLRP3Q96P20 1036 aa8.12□□□□□ -1.11
R3HDM2-213ENST00000551465 CDCA7Q9BWT1 371 aaPredicted RBP8.12□□□□□ -1.11
R3HDM2-213ENST00000551465 ERVK-9P63128 1117 aa8.11□□□□□ -1.11
R3HDM2-213ENST00000551465 EIF4G2P78344 907 aaKnown RBP eCLIP8.11□□□□□ -1.11
R3HDM2-213ENST00000551465 FGD1P98174 961 aa8.11□□□□□ -1.11
R3HDM2-213ENST00000551465 IRF5Q13568 498 aa8.11□□□□□ -1.11
R3HDM2-213ENST00000551465 TSGA10IPQ3SY00 556 aa8.11□□□□□ -1.11
R3HDM2-213ENST00000551465 CNTNAP3BQ96NU0 1288 aa8.11□□□□□ -1.11
R3HDM2-213ENST00000551465 CNTNAP3Q9BZ76 1288 aa8.11□□□□□ -1.11
R3HDM2-213ENST00000551465 SLC27A3Q5K4L6 730 aa8.1□□□□□ -1.11
R3HDM2-213ENST00000551465 CCDC125Q86Z20 511 aa8.1□□□□□ -1.11
R3HDM2-213ENST00000551465 HOMEZQ8IX15 550 aa8.1□□□□□ -1.11
R3HDM2-213ENST00000551465 CCDC85AQ96PX6 553 aaPredicted RBP8.1□□□□□ -1.11
R3HDM2-213ENST00000551465 RAB6BQ9NRW1 208 aa8.1□□□□□ -1.11
R3HDM2-213ENST00000551465 ITGA6P23229 1130 aa8.09□□□□□ -1.11
R3HDM2-213ENST00000551465 RNF144AP50876 292 aaPredicted RBP8.09□□□□□ -1.11
R3HDM2-213ENST00000551465 POU4F2Q12837 409 aa8.09□□□□□ -1.11
R3HDM2-213ENST00000551465 SLFNL1Q499Z3 407 aa8.09□□□□□ -1.11
R3HDM2-213ENST00000551465 CYP2U1Q7Z449 544 aa8.09□□□□□ -1.11
R3HDM2-213ENST00000551465 OSBPL3Q9H4L5 887 aa8.09□□□□□ -1.11
R3HDM2-213ENST00000551465 ARHGEF10LQ9HCE6 1279 aa8.09□□□□□ -1.11
R3HDM2-213ENST00000551465 SV2AQ7L0J3 742 aa8.08□□□□□ -1.12
R3HDM2-213ENST00000551465 COL25A1Q9BXS0 654 aaPredicted RBP8.08□□□□□ -1.12
R3HDM2-213ENST00000551465 SENP3-EIF4A1A0A087X0R7 540 aa8.07□□□□□ -1.12
R3HDM2-213ENST00000551465 MYCP01106 439 aaPredicted RBP8.07□□□□□ -1.12
R3HDM2-213ENST00000551465 RIPOR1Q6ZS17 1223 aa8.07□□□□□ -1.12
R3HDM2-213ENST00000551465 RNF135Q8IUD6 432 aa8.07□□□□□ -1.12
R3HDM2-213ENST00000551465 GAS2L1Q99501 681 aaPredicted RBP8.07□□□□□ -1.12
R3HDM2-213ENST00000551465 OXLD1Q5BKU9 147 aa8.06□□□□□ -1.12
R3HDM2-213ENST00000551465 DOLKQ9UPQ8 538 aa8.06□□□□□ -1.12
R3HDM2-213ENST00000551465 TRAK2O60296 914 aa8.05□□□□□ -1.12
R3HDM2-213ENST00000551465 KRT76Q01546 638 aa8.05□□□□□ -1.12
R3HDM2-213ENST00000551465 SEMA3FQ13275 785 aa8.05□□□□□ -1.12
R3HDM2-213ENST00000551465 MCM6Q14566 821 aa8.05□□□□□ -1.12
R3HDM2-213ENST00000551465 NANOS1Q8WY41 292 aaKnown RBP8.05□□□□□ -1.12
R3HDM2-213ENST00000551465 CUEDC1Q9NWM3 386 aaPredicted RBP8.05□□□□□ -1.12
R3HDM2-213ENST00000551465 STAU1O95793 577 aaKnown RBP8.04□□□□□ -1.12
R3HDM2-213ENST00000551465 PHKA2P46019 1235 aa8.04□□□□□ -1.12
R3HDM2-213ENST00000551465 WASHC4Q2M389 1173 aa8.04□□□□□ -1.12
R3HDM2-213ENST00000551465 CNKSR1Q969H4 720 aa8.04□□□□□ -1.12
R3HDM2-213ENST00000551465 CCDC136Q96JN2 1154 aa8.04□□□□□ -1.12
R3HDM2-213ENST00000551465 GPC1P35052 558 aa8.03□□□□□ -1.12
R3HDM2-213ENST00000551465 CENPCQ03188 943 aa8.03□□□□□ -1.12
R3HDM2-213ENST00000551465 USP4Q13107 963 aa8.03□□□□□ -1.12
R3HDM2-213ENST00000551465 CLN3Q13286 438 aa8.03□□□□□ -1.12
R3HDM2-213ENST00000551465 RNFT1Q5M7Z0 435 aa8.03□□□□□ -1.12
R3HDM2-213ENST00000551465 PHTF2Q8N3S3 785 aa8.03□□□□□ -1.12
R3HDM2-213ENST00000551465 GRIP2Q9C0E4 1043 aa8.03□□□□□ -1.12
R3HDM2-213ENST00000551465 ZMYND15Q9H091 742 aa8.03□□□□□ -1.12
R3HDM2-213ENST00000551465 COG6Q9Y2V7 657 aa8.03□□□□□ -1.12
R3HDM2-213ENST00000551465 GNRH1P01148 92 aa8.02□□□□□ -1.13
R3HDM2-213ENST00000551465 AAMPQ13685 434 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 676.7 ms