RNA–Protein interactions for RNA: ENST00000551280.1

LINC02258-201, Transcript of long intergenic non-protein coding RNA 2258, humanhuman

TSL 2 BASIC

Gene LINC02258, Length 777 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02258-201ENST00000551280 RAB15P59190 212 aa9.61□□□□□ -0.87
LINC02258-201ENST00000551280 TREML4Q6UXN2 200 aa9.61□□□□□ -0.87
LINC02258-201ENST00000551280 TBC1D9Q6ZT07 1266 aa9.61□□□□□ -0.87
LINC02258-201ENST00000551280 PLEKHM2Q8IWE5 1019 aa9.61□□□□□ -0.87
LINC02258-201ENST00000551280 PHTF2Q8N3S3 785 aa9.61□□□□□ -0.87
LINC02258-201ENST00000551280 ZNF784Q8NCA9 323 aaPredicted RBP9.61□□□□□ -0.87
LINC02258-201ENST00000551280 ACIN1Q9UKV3 1341 aaKnown RBP9.6□□□□□ -0.87
LINC02258-201ENST00000551280 LILRA1O75019 489 aa9.6□□□□□ -0.87
LINC02258-201ENST00000551280 LMOD1P29536 600 aaPredicted RBP9.6□□□□□ -0.87
LINC02258-201ENST00000551280 SLFNL1Q499Z3 407 aa9.6□□□□□ -0.87
LINC02258-201ENST00000551280 LCE2AQ5TA79 106 aaPredicted RBP9.6□□□□□ -0.87
LINC02258-201ENST00000551280 RNF20Q5VTR2 975 aa9.6□□□□□ -0.87
LINC02258-201ENST00000551280 SOS2Q07890 1332 aaPredicted RBP9.59□□□□□ -0.87
LINC02258-201ENST00000551280 TERTO14746 1132 aaKnown RBP9.59□□□□□ -0.87
LINC02258-201ENST00000551280 PDE4CQ08493 712 aa9.59□□□□□ -0.87
LINC02258-201ENST00000551280 NFX1Q12986 1120 aaKnown RBP9.59□□□□□ -0.87
LINC02258-201ENST00000551280 SPINT1O43278 529 aa9.58□□□□□ -0.88
LINC02258-201ENST00000551280 ADD1P35611 737 aaKnown RBP9.58□□□□□ -0.88
LINC02258-201ENST00000551280 MAP7D1Q3KQU3 841 aa9.58□□□□□ -0.88
LINC02258-201ENST00000551280 NXF1Q9UBU9 619 aaKnown RBP9.58□□□□□ -0.88
LINC02258-201ENST00000551280 PIK3CDO00329 1044 aa9.57□□□□□ -0.88
LINC02258-201ENST00000551280 RNF135Q8IUD6 432 aa9.57□□□□□ -0.88
LINC02258-201ENST00000551280 NPAS3Q8IXF0 933 aa9.57□□□□□ -0.88
LINC02258-201ENST00000551280 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.56□□□□□ -0.88
LINC02258-201ENST00000551280 USP17L5A8MUK1 530 aa9.56□□□□□ -0.88
LINC02258-201ENST00000551280 WFS1O76024 890 aa9.56□□□□□ -0.88
LINC02258-201ENST00000551280 ADH1AP07327 375 aa9.56□□□□□ -0.88
LINC02258-201ENST00000551280 SKIP12755 728 aa9.56□□□□□ -0.88
LINC02258-201ENST00000551280 RFX1P22670 979 aa9.56□□□□□ -0.88
LINC02258-201ENST00000551280 USP17L3A6NCW0 530 aa9.55□□□□□ -0.88
LINC02258-201ENST00000551280 USP17L4A6NCW7 530 aa9.55□□□□□ -0.88
LINC02258-201ENST00000551280 MAN1A2O60476 641 aa9.55□□□□□ -0.88
LINC02258-201ENST00000551280 ATG7O95352 703 aa9.55□□□□□ -0.88
LINC02258-201ENST00000551280 PDIA4P13667 645 aaKnown RBP9.55□□□□□ -0.88
LINC02258-201ENST00000551280 USP17L2Q6R6M4 530 aa9.55□□□□□ -0.88
LINC02258-201ENST00000551280 USP17L1Q7RTZ2 530 aa9.55□□□□□ -0.88
LINC02258-201ENST00000551280 AGBL1Q96MI9 1066 aa9.55□□□□□ -0.88
LINC02258-201ENST00000551280 TRAIPQ9BWF2 469 aa9.55□□□□□ -0.88
LINC02258-201ENST00000551280 TTLL8A6PVC2 850 aa9.54□□□□□ -0.88
LINC02258-201ENST00000551280 SOBPA7XYQ1 873 aa9.54□□□□□ -0.88
LINC02258-201ENST00000551280 ERVK-9P63128 1117 aa9.54□□□□□ -0.88
LINC02258-201ENST00000551280 RELBQ01201 579 aa9.54□□□□□ -0.88
LINC02258-201ENST00000551280 KANK4Q5T7N3 995 aaPredicted RBP9.54□□□□□ -0.88
LINC02258-201ENST00000551280 KDF1Q8NAX2 398 aaPredicted RBP9.54□□□□□ -0.88
LINC02258-201ENST00000551280 PLPP7Q8NBV4 271 aa9.54□□□□□ -0.88
LINC02258-201ENST00000551280 VRTNQ9H8Y1 702 aa9.54□□□□□ -0.88
LINC02258-201ENST00000551280 CYLDQ9NQC7 956 aa9.54□□□□□ -0.88
LINC02258-201ENST00000551280 USTQ9Y2C2 406 aa9.54□□□□□ -0.88
LINC02258-201ENST00000551280 PTGIRP43119 386 aa9.53□□□□□ -0.88
LINC02258-201ENST00000551280 CC2D2BQ6DHV5 1058 aa9.53□□□□□ -0.88
LINC02258-201ENST00000551280 RETREG2Q8NC44 543 aa9.53□□□□□ -0.88
LINC02258-201ENST00000551280 DNMT3LQ9UJW3 386 aa9.53□□□□□ -0.88
LINC02258-201ENST00000551280 ELOAQ14241 798 aaKnown RBP9.52□□□□□ -0.89
LINC02258-201ENST00000551280 SLC16A10Q8TF71 515 aa9.52□□□□□ -0.89
LINC02258-201ENST00000551280 ATP5J2-PTCD1G3V325 749 aa9.51□□□□□ -0.89
LINC02258-201ENST00000551280 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.51□□□□□ -0.89
LINC02258-201ENST00000551280 ZNF395Q9H8N7 513 aaPredicted RBP9.51□□□□□ -0.89
LINC02258-201ENST00000551280 PCDHB11Q9Y5F2 797 aa9.51□□□□□ -0.89
LINC02258-201ENST00000551280 FAM196BA6NMK8 535 aa9.5□□□□□ -0.89
LINC02258-201ENST00000551280 H3BM21 787 aa9.5□□□□□ -0.89
LINC02258-201ENST00000551280 CTSOP43234 321 aaPredicted RBP9.5□□□□□ -0.89
LINC02258-201ENST00000551280 NCOA4Q13772 614 aa9.5□□□□□ -0.89
LINC02258-201ENST00000551280 EML3Q32P44 896 aa9.5□□□□□ -0.89
LINC02258-201ENST00000551280 INSM2Q96T92 566 aaPredicted RBP9.5□□□□□ -0.89
LINC02258-201ENST00000551280 CSB-PGBD3P0DP91 1061 aa9.49□□□□□ -0.89
LINC02258-201ENST00000551280 LCE2CQ5TA81 110 aa9.49□□□□□ -0.89
LINC02258-201ENST00000551280 CCDC85AQ96PX6 553 aaPredicted RBP9.49□□□□□ -0.89
LINC02258-201ENST00000551280 MKRN1Q9UHC7 482 aaKnown RBP9.49□□□□□ -0.89
LINC02258-201ENST00000551280 DOLKQ9UPQ8 538 aa9.49□□□□□ -0.89
LINC02258-201ENST00000551280 FIGNL2A6NMB9 653 aa9.48□□□□□ -0.89
LINC02258-201ENST00000551280 SCTRP47872 440 aa9.48□□□□□ -0.89
LINC02258-201ENST00000551280 SIRT1Q96EB6 747 aa9.48□□□□□ -0.89
LINC02258-201ENST00000551280 TRIM50Q86XT4 487 aa9.47□□□□□ -0.89
LINC02258-201ENST00000551280 DEPDC4Q8N2C3 294 aa9.47□□□□□ -0.89
LINC02258-201ENST00000551280 RNF217Q8TC41 542 aa9.47□□□□□ -0.89
LINC02258-201ENST00000551280 OSBPL3Q9H4L5 887 aa9.47□□□□□ -0.89
LINC02258-201ENST00000551280 POLMQ9NP87 494 aaPredicted RBP9.47□□□□□ -0.89
LINC02258-201ENST00000551280 WIPF1O43516 503 aa9.46□□□□□ -0.9
LINC02258-201ENST00000551280 VEGFBP49765 207 aa9.46□□□□□ -0.9
LINC02258-201ENST00000551280 ATP1A2P50993 1020 aa9.46□□□□□ -0.9
LINC02258-201ENST00000551280 FOXD4L5Q5VV16 416 aaPredicted RBP9.46□□□□□ -0.9
LINC02258-201ENST00000551280 CYP2U1Q7Z449 544 aa9.46□□□□□ -0.9
LINC02258-201ENST00000551280 IRF7Q92985 503 aa9.46□□□□□ -0.9
LINC02258-201ENST00000551280 NOD1Q9Y239 953 aa9.46□□□□□ -0.9
LINC02258-201ENST00000551280 PPFIA3O75145 1194 aa9.45□□□□□ -0.9
LINC02258-201ENST00000551280 RNF144AP50876 292 aaPredicted RBP9.45□□□□□ -0.9
LINC02258-201ENST00000551280 PTSQ03393 145 aa9.45□□□□□ -0.9
LINC02258-201ENST00000551280 USP4Q13107 963 aa9.45□□□□□ -0.9
LINC02258-201ENST00000551280 TSGA10IPQ3SY00 556 aa9.45□□□□□ -0.9
LINC02258-201ENST00000551280 KCTD17Q8N5Z5 321 aa9.45□□□□□ -0.9
LINC02258-201ENST00000551280 CDCA7Q9BWT1 371 aaPredicted RBP9.45□□□□□ -0.9
LINC02258-201ENST00000551280 A0A1W2PRU2 124 aa9.44□□□□□ -0.9
LINC02258-201ENST00000551280 GPC1P35052 558 aa9.44□□□□□ -0.9
LINC02258-201ENST00000551280 PTK7Q13308 1070 aa9.44□□□□□ -0.9
LINC02258-201ENST00000551280 CDCA8Q53HL2 280 aa9.44□□□□□ -0.9
LINC02258-201ENST00000551280 LARP1Q6PKG0 1096 aaKnown RBP9.44□□□□□ -0.9
LINC02258-201ENST00000551280 ESF1Q9H501 851 aaKnown RBP9.44□□□□□ -0.9
LINC02258-201ENST00000551280 USP17L15C9J2P7 530 aa9.43□□□□□ -0.9
LINC02258-201ENST00000551280 USP17L10C9JJH3 530 aa9.43□□□□□ -0.9
LINC02258-201ENST00000551280 USP17L13C9JLJ4 530 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms