RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 CRB1P82279 1406 aa25.37■■□□□ 1.65
SSH1-209ENST00000551165 GAS2L2Q8NHY3 880 aa25.37■■□□□ 1.65
SSH1-209ENST00000551165 MIS18AQ9NYP9 233 aa25.37■■□□□ 1.65
SSH1-209ENST00000551165 KRT24Q2M2I5 525 aa25.37■■□□□ 1.65
SSH1-209ENST00000551165 TCERG1O14776 1098 aaKnown RBP25.35■■□□□ 1.65
SSH1-209ENST00000551165 CHL1O00533 1208 aa25.34■■□□□ 1.65
SSH1-209ENST00000551165 CHRNA2Q15822 529 aa25.34■■□□□ 1.65
SSH1-209ENST00000551165 RTF1Q92541 710 aaKnown RBP25.34■■□□□ 1.65
SSH1-209ENST00000551165 NOB1Q9ULX3 412 aaKnown RBP25.33■■□□□ 1.65
SSH1-209ENST00000551165 SOS2Q07890 1332 aaPredicted RBP25.33■■□□□ 1.65
SSH1-209ENST00000551165 TWISTNBQ3B726 338 aaPredicted RBP25.32■■□□□ 1.64
SSH1-209ENST00000551165 CRYBG1Q9Y4K1 1723 aa25.32■■□□□ 1.64
SSH1-209ENST00000551165 ZKSCAN2Q63HK3 967 aa25.32■■□□□ 1.64
SSH1-209ENST00000551165 GNAT3A8MTJ3 354 aa25.31■■□□□ 1.64
SSH1-209ENST00000551165 IL17REQ8NFR9 667 aa25.31■■□□□ 1.64
SSH1-209ENST00000551165 ERBB3P21860 1342 aa25.31■■□□□ 1.64
SSH1-209ENST00000551165 TRIM27P14373 513 aa25.31■■□□□ 1.64
SSH1-209ENST00000551165 ALDH1L2Q3SY69 923 aa25.29■■□□□ 1.64
SSH1-209ENST00000551165 COL18A1P39060 1754 aa25.29■■□□□ 1.64
SSH1-209ENST00000551165 KIAA0232Q92628 1395 aa25.29■■□□□ 1.64
SSH1-209ENST00000551165 MAP3K5Q99683 1374 aa25.29■■□□□ 1.64
SSH1-209ENST00000551165 SKAP1Q86WV1 359 aa25.28■■□□□ 1.64
SSH1-209ENST00000551165 NCAPD2Q15021 1401 aa25.28■■□□□ 1.64
SSH1-209ENST00000551165 DZIP1LQ8IYY4 767 aaKnown RBP25.27■■□□□ 1.64
SSH1-209ENST00000551165 ATF7IPQ6VMQ6 1270 aa25.26■■□□□ 1.63
SSH1-209ENST00000551165 MRPL50Q8N5N7 158 aaKnown RBP25.26■■□□□ 1.63
SSH1-209ENST00000551165 HTATSF1O43719 755 aaKnown RBP25.26■■□□□ 1.63
SSH1-209ENST00000551165 KDM2BQ8NHM5 1336 aa25.25■■□□□ 1.63
SSH1-209ENST00000551165 TSPYL4Q9UJ04 414 aa25.25■■□□□ 1.63
SSH1-209ENST00000551165 LRRC37A3O60309 1634 aa25.24■■□□□ 1.63
SSH1-209ENST00000551165 FTSJ3Q8IY81 847 aaKnown RBP25.24■■□□□ 1.63
SSH1-209ENST00000551165 LGR6Q9HBX8 967 aa25.24■■□□□ 1.63
SSH1-209ENST00000551165 CAMTA1Q9Y6Y1 1673 aa25.24■■□□□ 1.63
SSH1-209ENST00000551165 ZNF428Q96B54 188 aa25.24■■□□□ 1.63
SSH1-209ENST00000551165 NLRP2Q9NX02 1062 aa25.24■■□□□ 1.63
SSH1-209ENST00000551165 MVPQ14764 893 aaKnown RBP25.22■■□□□ 1.63
SSH1-209ENST00000551165 KIF16BQ96L93 1317 aa25.22■■□□□ 1.63
SSH1-209ENST00000551165 ZNF530Q6P9A1 599 aaPredicted RBP25.22■■□□□ 1.63
SSH1-209ENST00000551165 BRPF1P55201 1214 aaPredicted RBP25.21■■□□□ 1.63
SSH1-209ENST00000551165 LMO7Q8WWI1 1683 aa25.21■■□□□ 1.63
SSH1-209ENST00000551165 NHSL1Q5SYE7 1610 aa25.21■■□□□ 1.63
SSH1-209ENST00000551165 IGHDP01880 384 aa25.2■■□□□ 1.63
SSH1-209ENST00000551165 TMEM57Q8N5G2 664 aa25.2■■□□□ 1.63
SSH1-209ENST00000551165 CPDO75976 1380 aa25.2■■□□□ 1.63
SSH1-209ENST00000551165 PLEKHO1Q53GL0 409 aaPredicted RBP25.2■■□□□ 1.62
SSH1-209ENST00000551165 CSB-PGBD3P0DP91 1061 aa25.19■■□□□ 1.62
SSH1-209ENST00000551165 MPRIPQ6WCQ1 1025 aa25.19■■□□□ 1.62
SSH1-209ENST00000551165 LTBP4Q8N2S1 1624 aa25.19■■□□□ 1.62
SSH1-209ENST00000551165 PCDHB15Q9Y5E8 787 aa25.19■■□□□ 1.62
SSH1-209ENST00000551165 IPO8O15397 1037 aaKnown RBP25.18■■□□□ 1.62
SSH1-209ENST00000551165 CEMIPQ8WUJ3 1361 aa25.17■■□□□ 1.62
SSH1-209ENST00000551165 ITPRIPQ8IWB1 547 aa25.17■■□□□ 1.62
SSH1-209ENST00000551165 FAM208AQ9UK61 1670 aaKnown RBP25.17■■□□□ 1.62
SSH1-209ENST00000551165 PRDM11Q9NQV5 511 aa25.17■■□□□ 1.62
SSH1-209ENST00000551165 TAF7Q15545 349 aaPredicted RBP25.16■■□□□ 1.62
SSH1-209ENST00000551165 AMOTQ4VCS5 1084 aa25.16■■□□□ 1.62
SSH1-209ENST00000551165 AKAP4Q5JQC9 854 aa25.16■■□□□ 1.62
SSH1-209ENST00000551165 HAP1P54257 671 aaPredicted RBP25.16■■□□□ 1.62
SSH1-209ENST00000551165 CENPQQ7L2Z9 268 aaPredicted RBP25.15■■□□□ 1.62
SSH1-209ENST00000551165 MS4A1P11836 297 aa25.15■■□□□ 1.62
SSH1-209ENST00000551165 ABCA3Q99758 1704 aa25.15■■□□□ 1.62
SSH1-209ENST00000551165 MEGF6O75095 1541 aa25.13■■□□□ 1.61
SSH1-209ENST00000551165 ROBO1Q9Y6N7 1651 aa25.13■■□□□ 1.61
SSH1-209ENST00000551165 RAPGEF4Q8WZA2 1011 aa25.12■■□□□ 1.61
SSH1-209ENST00000551165 C1orf141Q5JVX7 400 aa25.11■■□□□ 1.61
SSH1-209ENST00000551165 ARHGAP45Q92619 1136 aa25.11■■□□□ 1.61
SSH1-209ENST00000551165 ABCC6O95255 1503 aa25.11■■□□□ 1.61
SSH1-209ENST00000551165 RNMTO43148 476 aaKnown RBP25.1■■□□□ 1.61
SSH1-209ENST00000551165 KCNQ3O43525 872 aa25.1■■□□□ 1.61
SSH1-209ENST00000551165 RBM19Q9Y4C8 960 aaKnown RBP25.1■■□□□ 1.61
SSH1-209ENST00000551165 NECTIN2Q92692 538 aa25.09■■□□□ 1.61
SSH1-209ENST00000551165 DDX19BQ9UMR2 479 aa25.09■■□□□ 1.61
SSH1-209ENST00000551165 VIRMAQ69YN4 1812 aaKnown RBP25.08■■□□□ 1.6
SSH1-209ENST00000551165 SLC4A2P04920 1241 aa25.08■■□□□ 1.6
SSH1-209ENST00000551165 TATP17735 454 aaPredicted RBP25.08■■□□□ 1.6
SSH1-209ENST00000551165 ABCC4O15439 1325 aa25.08■■□□□ 1.6
SSH1-209ENST00000551165 G2E3Q7L622 706 aa25.07■■□□□ 1.6
SSH1-209ENST00000551165 TEFQ10587 303 aa25.07■■□□□ 1.6
SSH1-209ENST00000551165 ZBTB40Q9NUA8 1239 aa25.06■■□□□ 1.6
SSH1-209ENST00000551165 COL5A2P05997 1499 aaPredicted RBP25.06■■□□□ 1.6
SSH1-209ENST00000551165 AAMPQ13685 434 aa25.05■■□□□ 1.6
SSH1-209ENST00000551165 BABAM1Q9NWV8 329 aa25.05■■□□□ 1.6
SSH1-209ENST00000551165 WDR17Q8IZU2 1322 aa25.05■■□□□ 1.6
SSH1-209ENST00000551165 RGS12O14924 1447 aa25.05■■□□□ 1.6
SSH1-209ENST00000551165 TOM1L2Q6ZVM7 507 aa25.04■■□□□ 1.6
SSH1-209ENST00000551165 BTBD11A6QL63 1104 aa25.04■■□□□ 1.6
SSH1-209ENST00000551165 STRN4Q9NRL3 753 aa25.04■■□□□ 1.6
SSH1-209ENST00000551165 API5Q9BZZ5 524 aaKnown RBP25.03■■□□□ 1.6
SSH1-209ENST00000551165 ZBTB7BO15156 539 aaPredicted RBP25.03■■□□□ 1.6
SSH1-209ENST00000551165 PHKG2P15735 406 aa25.03■■□□□ 1.6
SSH1-209ENST00000551165 EIF4A1P60842 406 aaKnown RBP25.03■■□□□ 1.6
SSH1-209ENST00000551165 KDM3BQ7LBC6 1761 aa25.02■■□□□ 1.6
SSH1-209ENST00000551165 LARP1Q6PKG0 1096 aaKnown RBP25.02■■□□□ 1.6
SSH1-209ENST00000551165 CYP27B1O15528 508 aa25.02■■□□□ 1.6
SSH1-209ENST00000551165 SPG7Q9UQ90 795 aa25.01■■□□□ 1.59
SSH1-209ENST00000551165 KDM6AO15550 1401 aaPredicted RBP25.01■■□□□ 1.59
SSH1-209ENST00000551165 AHDC1Q5TGY3 1603 aaPredicted RBP25■■□□□ 1.59
SSH1-209ENST00000551165 C1orf115Q9H7X2 142 aa25■■□□□ 1.59
SSH1-209ENST00000551165 ADAMTS7Q9UKP4 1686 aa24.99■■□□□ 1.59
SSH1-209ENST00000551165 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms