RNA–Protein interactions for RNA: ENST00000550375.1

BRF1-217, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,362 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-217ENST00000550375 KRT27Q7Z3Y8 459 aa23.04■■□□□ 1.28
BRF1-217ENST00000550375 U2AF1L5P0DN76 240 aaPredicted RBP23.02■■□□□ 1.28
BRF1-217ENST00000550375 U2AF1Q01081 240 aaKnown RBP eCLIP23.02■■□□□ 1.28
BRF1-217ENST00000550375 FAM182BQ5T319 152 aa23.02■■□□□ 1.28
BRF1-217ENST00000550375 OVOS2A0A0G2JMS6 1433 aa23.02■■□□□ 1.28
BRF1-217ENST00000550375 TNS2Q63HR2 1409 aa23.01■■□□□ 1.27
BRF1-217ENST00000550375 CCDC184Q52MB2 194 aa23.01■■□□□ 1.27
BRF1-217ENST00000550375 ZCRB1Q8TBF4 217 aaKnown RBP23.01■■□□□ 1.27
BRF1-217ENST00000550375 SHANK3Q9BYB0 1731 aa23■■□□□ 1.27
BRF1-217ENST00000550375 KDRP35968 1356 aa23■■□□□ 1.27
BRF1-217ENST00000550375 DDX54Q8TDD1 881 aaKnown RBP22.99■■□□□ 1.27
BRF1-217ENST00000550375 PKD1L3Q7Z443 1732 aa22.98■■□□□ 1.27
BRF1-217ENST00000550375 MARCH10Q8NA82 808 aaPredicted RBP22.98■■□□□ 1.27
BRF1-217ENST00000550375 MRS2Q9HD23 443 aa22.96■■□□□ 1.27
BRF1-217ENST00000550375 SPG7Q9UQ90 795 aa22.96■■□□□ 1.27
BRF1-217ENST00000550375 RSPH6AQ9H0K4 717 aa22.95■■□□□ 1.26
BRF1-217ENST00000550375 PRKAR2BP31323 418 aa22.94■■□□□ 1.26
BRF1-217ENST00000550375 WDR43Q15061 677 aaKnown RBP eCLIP22.94■■□□□ 1.26
BRF1-217ENST00000550375 PLEKHO1Q53GL0 409 aaPredicted RBP22.94■■□□□ 1.26
BRF1-217ENST00000550375 KAT6BQ8WYB5 2073 aa22.94■■□□□ 1.26
BRF1-217ENST00000550375 PCDH11XQ9BZA7 1347 aa22.93■■□□□ 1.26
BRF1-217ENST00000550375 PCDH11YQ9BZA8 1340 aa22.93■■□□□ 1.26
BRF1-217ENST00000550375 FCHSD2O94868 740 aa22.92■■□□□ 1.26
BRF1-217ENST00000550375 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.92■■□□□ 1.26
BRF1-217ENST00000550375 AMOTQ4VCS5 1084 aa22.91■■□□□ 1.26
BRF1-217ENST00000550375 CYP27B1O15528 508 aa22.9■■□□□ 1.26
BRF1-217ENST00000550375 FAM196AQ6ZSG2 479 aa22.9■■□□□ 1.26
BRF1-217ENST00000550375 ZNF530Q6P9A1 599 aaPredicted RBP22.89■■□□□ 1.26
BRF1-217ENST00000550375 PHACTR3Q96KR7 559 aa22.89■■□□□ 1.26
BRF1-217ENST00000550375 PLEKHG2Q9H7P9 1386 aa22.89■■□□□ 1.25
BRF1-217ENST00000550375 SBF2Q86WG5 1849 aa22.89■■□□□ 1.25
BRF1-217ENST00000550375 MTHFSDQ2M296 383 aaKnown RBP22.89■■□□□ 1.25
BRF1-217ENST00000550375 MIER1Q8N108 512 aa22.89■■□□□ 1.25
BRF1-217ENST00000550375 ADAMTS8Q9UP79 889 aa22.89■■□□□ 1.25
BRF1-217ENST00000550375 IFNL2Q8IZJ0 200 aa22.88■■□□□ 1.25
BRF1-217ENST00000550375 PHKG2P15735 406 aa22.87■■□□□ 1.25
BRF1-217ENST00000550375 C1orf141Q5JVX7 400 aa22.86■■□□□ 1.25
BRF1-217ENST00000550375 CCDC146Q8IYE0 955 aa22.86■■□□□ 1.25
BRF1-217ENST00000550375 ACSBG1Q96GR2 724 aa22.86■■□□□ 1.25
BRF1-217ENST00000550375 DOT1LQ8TEK3 1739 aa22.85■■□□□ 1.25
BRF1-217ENST00000550375 NEFMP07197 916 aa22.85■■□□□ 1.25
BRF1-217ENST00000550375 PNISRQ8TF01 805 aaKnown RBP22.85■■□□□ 1.25
BRF1-217ENST00000550375 PLEKHF1Q96S99 279 aa22.85■■□□□ 1.25
BRF1-217ENST00000550375 PNNQ9H307 717 aaKnown RBP22.85■■□□□ 1.25
BRF1-217ENST00000550375 TRIM37O94972 964 aa22.84■■□□□ 1.25
BRF1-217ENST00000550375 EP400Q96L91 3159 aa22.83■■□□□ 1.25
BRF1-217ENST00000550375 MAPK8IP3Q9UPT6 1336 aa22.83■■□□□ 1.25
BRF1-217ENST00000550375 GAS2L2Q8NHY3 880 aa22.83■■□□□ 1.25
BRF1-217ENST00000550375 VIRMAQ69YN4 1812 aaKnown RBP22.82■■□□□ 1.24
BRF1-217ENST00000550375 BCL9O00512 1426 aa22.82■■□□□ 1.24
BRF1-217ENST00000550375 CCER2I3L3R5 266 aa22.81■■□□□ 1.24
BRF1-217ENST00000550375 KCNQ2O43526 872 aa22.81■■□□□ 1.24
BRF1-217ENST00000550375 AKAP4Q5JQC9 854 aa22.81■■□□□ 1.24
BRF1-217ENST00000550375 MPRIPQ6WCQ1 1025 aa22.81■■□□□ 1.24
BRF1-217ENST00000550375 TOGARAM1Q9Y4F4 1720 aa22.81■■□□□ 1.24
BRF1-217ENST00000550375 NKX1-1Q15270 411 aaPredicted RBP22.8■■□□□ 1.24
BRF1-217ENST00000550375 PTF1AQ7RTS3 328 aa22.8■■□□□ 1.24
BRF1-217ENST00000550375 FAM9BQ8IZU0 186 aa22.8■■□□□ 1.24
BRF1-217ENST00000550375 SYTL4Q96C24 671 aaPredicted RBP22.8■■□□□ 1.24
BRF1-217ENST00000550375 NHSQ6T4R5 1651 aa22.8■■□□□ 1.24
BRF1-217ENST00000550375 DLG5Q8TDM6 1919 aa22.8■■□□□ 1.24
BRF1-217ENST00000550375 ITGB4P16144 1822 aa22.8■■□□□ 1.24
BRF1-217ENST00000550375 HSP90AB1P08238 724 aaKnown RBP22.79■■□□□ 1.24
BRF1-217ENST00000550375 PRIM1P49642 420 aaKnown RBP22.79■■□□□ 1.24
BRF1-217ENST00000550375 RUNDC1Q96C34 613 aa22.78■■□□□ 1.24
BRF1-217ENST00000550375 TNS1Q9HBL0 1735 aaKnown RBP22.78■■□□□ 1.24
BRF1-217ENST00000550375 SCN11AQ9UI33 1791 aa22.78■■□□□ 1.24
BRF1-217ENST00000550375 MAP3K5Q99683 1374 aa22.78■■□□□ 1.24
BRF1-217ENST00000550375 KDM6AO15550 1401 aaPredicted RBP22.77■■□□□ 1.24
BRF1-217ENST00000550375 DCAF5Q96JK2 942 aa22.77■■□□□ 1.24
BRF1-217ENST00000550375 GNAT3A8MTJ3 354 aa22.76■■□□□ 1.23
BRF1-217ENST00000550375 BCL11BQ9C0K0 894 aaPredicted RBP22.76■■□□□ 1.23
BRF1-217ENST00000550375 BTAF1O14981 1849 aa22.76■■□□□ 1.23
BRF1-217ENST00000550375 SF3B2Q13435 895 aaKnown RBP22.76■■□□□ 1.23
BRF1-217ENST00000550375 NFE2L2Q16236 605 aa22.76■■□□□ 1.23
BRF1-217ENST00000550375 LGR6Q9HBX8 967 aa22.76■■□□□ 1.23
BRF1-217ENST00000550375 RRP7AQ9Y3A4 280 aaKnown RBP22.75■■□□□ 1.23
BRF1-217ENST00000550375 RNMTO43148 476 aaKnown RBP22.74■■□□□ 1.23
BRF1-217ENST00000550375 APBA3O96018 575 aa22.74■■□□□ 1.23
BRF1-217ENST00000550375 CCDC125Q86Z20 511 aa22.74■■□□□ 1.23
BRF1-217ENST00000550375 SENP3-EIF4A1A0A087X0R7 540 aa22.73■■□□□ 1.23
BRF1-217ENST00000550375 NEUROD2Q15784 382 aa22.73■■□□□ 1.23
BRF1-217ENST00000550375 TMPOP42166 694 aaKnown RBP22.72■■□□□ 1.23
BRF1-217ENST00000550375 CABP4P57796 275 aa22.72■■□□□ 1.23
BRF1-217ENST00000550375 RTF1Q92541 710 aaKnown RBP22.72■■□□□ 1.23
BRF1-217ENST00000550375 ERVV-2B6SEH9 535 aa22.71■■□□□ 1.23
BRF1-217ENST00000550375 APAF1O14727 1248 aa22.71■■□□□ 1.23
BRF1-217ENST00000550375 RIPK4P57078 832 aa22.71■■□□□ 1.23
BRF1-217ENST00000550375 IL17REQ8NFR9 667 aa22.71■■□□□ 1.23
BRF1-217ENST00000550375 TMOD3Q9NYL9 352 aa22.71■■□□□ 1.23
BRF1-217ENST00000550375 ADAMTS7Q9UKP4 1686 aa22.71■■□□□ 1.23
BRF1-217ENST00000550375 DCTN1Q14203 1278 aa22.7■■□□□ 1.22
BRF1-217ENST00000550375 MCM10Q7L590 875 aa22.7■■□□□ 1.22
BRF1-217ENST00000550375 PIGBQ92521 554 aa22.7■■□□□ 1.22
BRF1-217ENST00000550375 DEFB132Q7Z7B7 95 aa22.69■■□□□ 1.22
BRF1-217ENST00000550375 BAG6P46379 1132 aa22.68■■□□□ 1.22
BRF1-217ENST00000550375 NFATC2IPQ8NCF5 419 aa22.68■■□□□ 1.22
BRF1-217ENST00000550375 HTATSF1O43719 755 aaKnown RBP22.67■■□□□ 1.22
BRF1-217ENST00000550375 EN1Q05925 392 aaPredicted RBP22.67■■□□□ 1.22
BRF1-217ENST00000550375 SLC52A2Q9HAB3 445 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms