RNA–Protein interactions for RNA: ENST00000550371.1

TWF1-209, Transcript of twinfilin actin binding protein 1, humanhuman

TSL 3

Gene TWF1, Length 612 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TWF1-209ENST00000550371 PIK3CDO00329 1044 aa8.11□□□□□ -1.11
TWF1-209ENST00000550371 ATP9BO43861 1147 aa8.11□□□□□ -1.11
TWF1-209ENST00000550371 NPM2Q86SE8 214 aaKnown RBP8.11□□□□□ -1.11
TWF1-209ENST00000550371 CCDC116Q8IYX3 515 aa8.11□□□□□ -1.11
TWF1-209ENST00000550371 SLC10A4Q96EP9 437 aa8.11□□□□□ -1.11
TWF1-209ENST00000550371 OCSTAMPQ9BR26 566 aa8.11□□□□□ -1.11
TWF1-209ENST00000550371 GZF1Q9H116 711 aaPredicted RBP8.11□□□□□ -1.11
TWF1-209ENST00000550371 EMILIN1Q9Y6C2 1016 aa8.11□□□□□ -1.11
TWF1-209ENST00000550371 RANGAP1P46060 587 aaPredicted RBP8.1□□□□□ -1.11
TWF1-209ENST00000550371 ATG7O95352 703 aa8.09□□□□□ -1.11
TWF1-209ENST00000550371 ZSCAN1Q8NBB4 408 aa8.09□□□□□ -1.11
TWF1-209ENST00000550371 ADAM32Q8TC27 787 aa8.09□□□□□ -1.11
TWF1-209ENST00000550371 PURBQ96QR8 312 aaKnown RBP8.09□□□□□ -1.11
TWF1-209ENST00000550371 KCTD15Q96SI1 283 aaPredicted RBP8.09□□□□□ -1.11
TWF1-209ENST00000550371 ERBB4Q15303 1308 aa8.08□□□□□ -1.12
TWF1-209ENST00000550371 MEIOBQ8N635 442 aa8.08□□□□□ -1.12
TWF1-209ENST00000550371 BRD1O95696 1058 aa8.07□□□□□ -1.12
TWF1-209ENST00000550371 DHX9Q08211 1270 aaKnown RBP8.07□□□□□ -1.12
TWF1-209ENST00000550371 TMCO4Q5TGY1 634 aa8.07□□□□□ -1.12
TWF1-209ENST00000550371 PGPEP1Q9NXJ5 209 aa8.07□□□□□ -1.12
TWF1-209ENST00000550371 TMEM88BA6NKF7 163 aa8.06□□□□□ -1.12
TWF1-209ENST00000550371 UPP2O95045 317 aa8.06□□□□□ -1.12
TWF1-209ENST00000550371 SKIP12755 728 aa8.06□□□□□ -1.12
TWF1-209ENST00000550371 LORP23490 312 aaPredicted RBP8.06□□□□□ -1.12
TWF1-209ENST00000550371 KCNA1Q09470 495 aa8.06□□□□□ -1.12
TWF1-209ENST00000550371 NBPF20Q3BBV1 942 aa8.06□□□□□ -1.12
TWF1-209ENST00000550371 KANK4Q5T7N3 995 aaPredicted RBP8.06□□□□□ -1.12
TWF1-209ENST00000550371 PPP1R26Q5T8A7 1209 aaPredicted RBP8.06□□□□□ -1.12
TWF1-209ENST00000550371 LINC00528Q8N1L1 170 aa8.06□□□□□ -1.12
TWF1-209ENST00000550371 VRTNQ9H8Y1 702 aa8.06□□□□□ -1.12
TWF1-209ENST00000550371 USP17L3A6NCW0 530 aa8.05□□□□□ -1.12
TWF1-209ENST00000550371 USP17L4A6NCW7 530 aa8.05□□□□□ -1.12
TWF1-209ENST00000550371 SOBPA7XYQ1 873 aa8.05□□□□□ -1.12
TWF1-209ENST00000550371 PATL2C9JE40 543 aaKnown RBP8.05□□□□□ -1.12
TWF1-209ENST00000550371 INTS6LQ5JSJ4 861 aaKnown RBP8.05□□□□□ -1.12
TWF1-209ENST00000550371 USP17L2Q6R6M4 530 aa8.05□□□□□ -1.12
TWF1-209ENST00000550371 USP17L1Q7RTZ2 530 aa8.05□□□□□ -1.12
TWF1-209ENST00000550371 NFATC2IPQ8NCF5 419 aa8.05□□□□□ -1.12
TWF1-209ENST00000550371 TSEN34Q9BSV6 310 aaKnown RBP8.05□□□□□ -1.12
TWF1-209ENST00000550371 USP17L5A8MUK1 530 aa8.04□□□□□ -1.12
TWF1-209ENST00000550371 DEPDC4Q8N2C3 294 aa8.04□□□□□ -1.12
TWF1-209ENST00000550371 PCDHB9Q9Y5E1 797 aa8.04□□□□□ -1.12
TWF1-209ENST00000550371 BMP2P12643 396 aa8.03□□□□□ -1.12
TWF1-209ENST00000550371 C6orf118Q5T5N4 469 aa8.03□□□□□ -1.12
TWF1-209ENST00000550371 Q6ZVU0 165 aa8.03□□□□□ -1.12
TWF1-209ENST00000550371 DZIP3Q86Y13 1208 aaKnown RBP8.03□□□□□ -1.12
TWF1-209ENST00000550371 CEP126Q9P2H0 1117 aa8.02□□□□□ -1.13
TWF1-209ENST00000550371 ZMIZ1Q9ULJ6 1067 aa8.02□□□□□ -1.13
TWF1-209ENST00000550371 ESPNB1AK53 854 aa8.01□□□□□ -1.13
TWF1-209ENST00000550371 MAN1A2O60476 641 aa8.01□□□□□ -1.13
TWF1-209ENST00000550371 MFAP1P55081 439 aaKnown RBP8.01□□□□□ -1.13
TWF1-209ENST00000550371 SLFNL1Q499Z3 407 aa8.01□□□□□ -1.13
TWF1-209ENST00000550371 PLEKHM2Q8IWE5 1019 aa8.01□□□□□ -1.13
TWF1-209ENST00000550371 STK32AQ8WU08 396 aa8.01□□□□□ -1.13
TWF1-209ENST00000550371 NOVA2Q9UNW9 492 aaKnown RBP8.01□□□□□ -1.13
TWF1-209ENST00000550371 SOS2Q07890 1332 aaPredicted RBP8.01□□□□□ -1.13
TWF1-209ENST00000550371 CBLBQ13191 982 aa8□□□□□ -1.13
TWF1-209ENST00000550371 ELOAQ14241 798 aaKnown RBP8□□□□□ -1.13
TWF1-209ENST00000550371 RNF135Q8IUD6 432 aa8□□□□□ -1.13
TWF1-209ENST00000550371 SEPT12Q8IYM1 358 aa8□□□□□ -1.13
TWF1-209ENST00000550371 IVNS1ABPQ9Y6Y0 642 aa8□□□□□ -1.13
TWF1-209ENST00000550371 VSIG8P0DPA2 414 aa7.99□□□□□ -1.13
TWF1-209ENST00000550371 NCOA4Q13772 614 aa7.99□□□□□ -1.13
TWF1-209ENST00000550371 TMEM164Q5U3C3 297 aa7.99□□□□□ -1.13
TWF1-209ENST00000550371 ZNF592Q92610 1267 aa7.99□□□□□ -1.13
TWF1-209ENST00000550371 MKRN1Q9UHC7 482 aaKnown RBP7.99□□□□□ -1.13
TWF1-209ENST00000550371 USP17L15C9J2P7 530 aa7.98□□□□□ -1.13
TWF1-209ENST00000550371 USP17L10C9JJH3 530 aa7.98□□□□□ -1.13
TWF1-209ENST00000550371 USP17L13C9JLJ4 530 aa7.98□□□□□ -1.13
TWF1-209ENST00000550371 USP17L12C9JPN9 530 aa7.98□□□□□ -1.13
TWF1-209ENST00000550371 USP17L11C9JVI0 530 aa7.98□□□□□ -1.13
TWF1-209ENST00000550371 USP17L21D6R901 530 aa7.98□□□□□ -1.13
TWF1-209ENST00000550371 USP17L18D6R9N7 530 aa7.98□□□□□ -1.13
TWF1-209ENST00000550371 USP17L22D6RA61 530 aa7.98□□□□□ -1.13
TWF1-209ENST00000550371 USP17L17D6RBQ6 530 aa7.98□□□□□ -1.13
TWF1-209ENST00000550371 USP17L19D6RCP7 530 aa7.98□□□□□ -1.13
TWF1-209ENST00000550371 USP17L20D6RJB6 530 aa7.98□□□□□ -1.13
TWF1-209ENST00000550371 SPINT1O43278 529 aa7.98□□□□□ -1.13
TWF1-209ENST00000550371 MCCD1P59942 119 aaPredicted RBP7.98□□□□□ -1.13
TWF1-209ENST00000550371 USP17L24Q0WX57 530 aa7.98□□□□□ -1.13
TWF1-209ENST00000550371 CRTC2Q53ET0 693 aaPredicted RBP7.98□□□□□ -1.13
TWF1-209ENST00000550371 CCDC125Q86Z20 511 aa7.98□□□□□ -1.13
TWF1-209ENST00000550371 PHTF2Q8N3S3 785 aa7.98□□□□□ -1.13
TWF1-209ENST00000550371 PLPP7Q8NBV4 271 aa7.98□□□□□ -1.13
TWF1-209ENST00000550371 RGS22Q8NE09 1264 aa7.98□□□□□ -1.13
TWF1-209ENST00000550371 TRIM52Q96A61 297 aa7.98□□□□□ -1.13
TWF1-209ENST00000550371 MTMR7Q9Y216 660 aa7.98□□□□□ -1.13
TWF1-209ENST00000550371 ERVH48-1M5A8F1 160 aa7.97□□□□□ -1.13
TWF1-209ENST00000550371 DNMT3LQ9UJW3 386 aa7.97□□□□□ -1.13
TWF1-209ENST00000550371 FAM196BA6NMK8 535 aa7.96□□□□□ -1.14
TWF1-209ENST00000550371 TTLL8A6PVC2 850 aa7.96□□□□□ -1.14
TWF1-209ENST00000550371 RASA1P20936 1047 aa7.96□□□□□ -1.14
TWF1-209ENST00000550371 LARP1Q6PKG0 1096 aaKnown RBP7.96□□□□□ -1.14
TWF1-209ENST00000550371 ZNF784Q8NCA9 323 aaPredicted RBP7.96□□□□□ -1.14
TWF1-209ENST00000550371 TMPRSS4Q9NRS4 437 aa7.96□□□□□ -1.14
TWF1-209ENST00000550371 LILRA1O75019 489 aa7.95□□□□□ -1.14
TWF1-209ENST00000550371 PPFIA3O75145 1194 aa7.95□□□□□ -1.14
TWF1-209ENST00000550371 RAB15P59190 212 aa7.95□□□□□ -1.14
TWF1-209ENST00000550371 PTK7Q13308 1070 aa7.95□□□□□ -1.14
TWF1-209ENST00000550371 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms