RNA–Protein interactions for RNA: ENST00000550371.1

TWF1-209, Transcript of twinfilin actin binding protein 1, humanhuman

TSL 3

Gene TWF1, Length 612 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TWF1-209ENST00000550371 AEBP2Q6ZN18 517 aaPredicted RBP23.36■■□□□ 1.33
TWF1-209ENST00000550371 CHIC1Q5VXU3 224 aa22.14■■□□□ 1.13
TWF1-209ENST00000550371 SENP3Q9H4L4 574 aaPredicted RBP19.95■□□□□ 0.78
TWF1-209ENST00000550371 PHF23Q9BUL5 403 aaPredicted RBP19.69■□□□□ 0.74
TWF1-209ENST00000550371 FOXD1Q16676 465 aa18.61■□□□□ 0.57
TWF1-209ENST00000550371 PLPPR3Q6T4P5 718 aa17.68■□□□□ 0.42
TWF1-209ENST00000550371 MSH5O43196 834 aa17.43■□□□□ 0.38
TWF1-209ENST00000550371 PIAS4Q8N2W9 510 aaPredicted RBP17.38■□□□□ 0.37
TWF1-209ENST00000550371 PPP6R1Q9UPN7 881 aa17.35■□□□□ 0.37
TWF1-209ENST00000550371 ADRA2BP18089 450 aa17.31■□□□□ 0.36
TWF1-209ENST00000550371 POTEDQ86YR6 584 aa17.11■□□□□ 0.33
TWF1-209ENST00000550371 MAPK8IP2Q13387 824 aaPredicted RBP15.91■□□□□ 0.14
TWF1-209ENST00000550371 SCAF1Q9H7N4 1312 aaKnown RBP15.84■□□□□ 0.13
TWF1-209ENST00000550371 DMRT2Q9Y5R5 561 aa15.81■□□□□ 0.12
TWF1-209ENST00000550371 PPP4R3CPQ6ZMV5 832 aa15.49■□□□□ 0.07
TWF1-209ENST00000550371 DCAF8L1A6NGE4 600 aa15.21■□□□□ 0.03
TWF1-209ENST00000550371 CNKSR2Q8WXI2 1034 aa15.21■□□□□ 0.03
TWF1-209ENST00000550371 HOXD11P31277 338 aaPredicted RBP15.2■□□□□ 0.02
TWF1-209ENST00000550371 RNF216Q9NWF9 866 aaPredicted RBP15.08■□□□□ 0
TWF1-209ENST00000550371 CACNB1Q02641 598 aaPredicted RBP15.01□□□□□ -0.01
TWF1-209ENST00000550371 NCBP3Q53F19 620 aaKnown RBP15□□□□□ -0.01
TWF1-209ENST00000550371 RNF39Q9H2S5 420 aa14.86□□□□□ -0.03
TWF1-209ENST00000550371 NPM3O75607 178 aaKnown RBP14.75□□□□□ -0.05
TWF1-209ENST00000550371 KCNA4P22459 653 aa14.7□□□□□ -0.06
TWF1-209ENST00000550371 DNAJC5BQ9UF47 199 aa14.67□□□□□ -0.06
TWF1-209ENST00000550371 C1QBPQ07021 282 aaKnown RBP14.65□□□□□ -0.06
TWF1-209ENST00000550371 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.52□□□□□ -0.09
TWF1-209ENST00000550371 U3KPZ7 1027 aaPredicted RBP14.18□□□□□ -0.14
TWF1-209ENST00000550371 SLC4A2P04920 1241 aa14.01□□□□□ -0.17
TWF1-209ENST00000550371 CAPN15O75808 1086 aa14□□□□□ -0.17
TWF1-209ENST00000550371 SPINK5Q9NQ38 1064 aaPredicted RBP14□□□□□ -0.17
TWF1-209ENST00000550371 SLC4A1APQ9BWU0 796 aaKnown RBP13.94□□□□□ -0.18
TWF1-209ENST00000550371 DSG3P32926 999 aa13.9□□□□□ -0.18
TWF1-209ENST00000550371 APLP2Q06481 763 aa13.8□□□□□ -0.2
TWF1-209ENST00000550371 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.77□□□□□ -0.21
TWF1-209ENST00000550371 HNRNPUL2Q1KMD3 747 aaKnown RBP13.77□□□□□ -0.21
TWF1-209ENST00000550371 TRHP20396 242 aaPredicted RBP13.76□□□□□ -0.21
TWF1-209ENST00000550371 ZNF219Q9P2Y4 722 aaPredicted RBP13.71□□□□□ -0.21
TWF1-209ENST00000550371 SAMD1Q6SPF0 538 aaPredicted RBP13.69□□□□□ -0.22
TWF1-209ENST00000550371 ABCB7O75027 752 aa13.66□□□□□ -0.22
TWF1-209ENST00000550371 MYCNP04198 464 aaPredicted RBP13.66□□□□□ -0.22
TWF1-209ENST00000550371 FOXD4L1Q9NU39 408 aa13.66□□□□□ -0.22
TWF1-209ENST00000550371 EHMT2Q96KQ7 1210 aa13.64□□□□□ -0.23
TWF1-209ENST00000550371 ZBTB22O15209 634 aa13.52□□□□□ -0.25
TWF1-209ENST00000550371 POTEHQ6S545 545 aa13.4□□□□□ -0.26
TWF1-209ENST00000550371 POLA2Q14181 598 aa13.37□□□□□ -0.27
TWF1-209ENST00000550371 RBM42Q9BTD8 480 aaKnown RBP13.28□□□□□ -0.28
TWF1-209ENST00000550371 ATF5Q9Y2D1 282 aaPredicted RBP13.27□□□□□ -0.29
TWF1-209ENST00000550371 ATXN8OSP0DMR3 200 aa13.26□□□□□ -0.29
TWF1-209ENST00000550371 CSRNP3Q8WYN3 585 aa13.19□□□□□ -0.3
TWF1-209ENST00000550371 ZBTB12Q9Y330 459 aaPredicted RBP13.09□□□□□ -0.31
TWF1-209ENST00000550371 CHRDL2Q6WN34 429 aa13.01□□□□□ -0.33
TWF1-209ENST00000550371 AKT1S1Q96B36 256 aa12.95□□□□□ -0.34
TWF1-209ENST00000550371 OSCARQ8IYS5 282 aa12.94□□□□□ -0.34
TWF1-209ENST00000550371 REM2Q8IYK8 340 aaPredicted RBP12.84□□□□□ -0.35
TWF1-209ENST00000550371 FBLN2P98095 1184 aa12.78□□□□□ -0.36
TWF1-209ENST00000550371 PITPNM1O00562 1244 aa12.7□□□□□ -0.38
TWF1-209ENST00000550371 MKRN4PQ13434 485 aaPredicted RBP12.69□□□□□ -0.38
TWF1-209ENST00000550371 SPDYE2BA6NHP3 402 aa12.68□□□□□ -0.38
TWF1-209ENST00000550371 SPDYE6P0CI01 402 aa12.68□□□□□ -0.38
TWF1-209ENST00000550371 SPDYE2Q495Y8 402 aa12.68□□□□□ -0.38
TWF1-209ENST00000550371 PIP4P2Q8N4L2 257 aa12.68□□□□□ -0.38
TWF1-209ENST00000550371 FXR2P51116 673 aaKnown RBP eCLIP12.59□□□□□ -0.39
TWF1-209ENST00000550371 SP7Q8TDD2 431 aaPredicted RBP12.53□□□□□ -0.4
TWF1-209ENST00000550371 ZNF692Q9BU19 519 aaPredicted RBP12.53□□□□□ -0.4
TWF1-209ENST00000550371 HAX1O00165 279 aa12.5□□□□□ -0.41
TWF1-209ENST00000550371 SSUH2Q9Y2M2 353 aa12.49□□□□□ -0.41
TWF1-209ENST00000550371 SPDYE1Q8NFV5 336 aaPredicted RBP12.48□□□□□ -0.41
TWF1-209ENST00000550371 CLEC11AQ9Y240 323 aa12.48□□□□□ -0.41
TWF1-209ENST00000550371 PRKAR2AP13861 404 aaKnown RBP12.38□□□□□ -0.43
TWF1-209ENST00000550371 PABPN1Q86U42 306 aaKnown RBP eCLIP12.35□□□□□ -0.43
TWF1-209ENST00000550371 EVX2Q03828 476 aa12.31□□□□□ -0.44
TWF1-209ENST00000550371 PRR29P0C7W0 189 aa12.26□□□□□ -0.45
TWF1-209ENST00000550371 SPDYE4A6NLX3 237 aa12.24□□□□□ -0.45
TWF1-209ENST00000550371 CHADLQ6NUI6 762 aa12.23□□□□□ -0.45
TWF1-209ENST00000550371 C19orf67A6NJJ6 358 aa12.19□□□□□ -0.46
TWF1-209ENST00000550371 STAG3Q9UJ98 1225 aa12.07□□□□□ -0.48
TWF1-209ENST00000550371 GABBR2O75899 941 aa12.04□□□□□ -0.48
TWF1-209ENST00000550371 PROM2Q8N271 834 aa12.04□□□□□ -0.48
TWF1-209ENST00000550371 FARP1Q9Y4F1 1045 aaPredicted RBP12.04□□□□□ -0.48
TWF1-209ENST00000550371 CD44P16070 742 aaKnown RBP11.99□□□□□ -0.49
TWF1-209ENST00000550371 CREBZFQ9NS37 354 aa11.92□□□□□ -0.5
TWF1-209ENST00000550371 FKBP8Q14318 412 aa11.91□□□□□ -0.5
TWF1-209ENST00000550371 CLCN6P51797 869 aa11.82□□□□□ -0.52
TWF1-209ENST00000550371 ZRANB1Q9UGI0 708 aa11.82□□□□□ -0.52
TWF1-209ENST00000550371 RTN4Q9NQC3 1192 aaKnown RBP11.8□□□□□ -0.52
TWF1-209ENST00000550371 ZNF579Q8NAF0 562 aaKnown RBP11.78□□□□□ -0.52
TWF1-209ENST00000550371 POTEIP0CG38 1075 aa11.77□□□□□ -0.53
TWF1-209ENST00000550371 AMER1Q5JTC6 1135 aaPredicted RBP11.76□□□□□ -0.53
TWF1-209ENST00000550371 LHX8Q68G74 356 aa11.76□□□□□ -0.53
TWF1-209ENST00000550371 NPM1P06748 294 aaKnown RBP eCLIP11.72□□□□□ -0.53
TWF1-209ENST00000550371 DCBLD2Q96PD2 775 aa11.72□□□□□ -0.53
TWF1-209ENST00000550371 PAK3O75914 559 aaPredicted RBP11.71□□□□□ -0.53
TWF1-209ENST00000550371 MNX1P50219 401 aaPredicted RBP11.71□□□□□ -0.53
TWF1-209ENST00000550371 GALR2O43603 387 aaPredicted RBP11.66□□□□□ -0.54
TWF1-209ENST00000550371 PLEKHG5O94827 1062 aa11.65□□□□□ -0.54
TWF1-209ENST00000550371 MIER1Q8N108 512 aa11.64□□□□□ -0.55
TWF1-209ENST00000550371 PHF12Q96QT6 1004 aa11.64□□□□□ -0.55
TWF1-209ENST00000550371 FBXO3Q9UK99 471 aa11.64□□□□□ -0.55
TWF1-209ENST00000550371 PLCD3Q8N3E9 789 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms