RNA–Protein interactions for RNA: ENST00000549559.2

SYT1-207, Transcript of synaptotagmin 1, humanhuman

TSL 4

Gene SYT1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-207ENST00000549559 RGPD1P0DJD0 1748 aa16.59■□□□□ 0.25
SYT1-207ENST00000549559 WNK3Q9BYP7 1800 aa16.59■□□□□ 0.25
SYT1-207ENST00000549559 FAM98CQ17RN3 349 aaKnown RBP16.57■□□□□ 0.24
SYT1-207ENST00000549559 USHBP1Q8N6Y0 703 aa16.57■□□□□ 0.24
SYT1-207ENST00000549559 CDCA7Q9BWT1 371 aaPredicted RBP16.57■□□□□ 0.24
SYT1-207ENST00000549559 DISP2A7MBM2 1401 aa16.56■□□□□ 0.24
SYT1-207ENST00000549559 POTEHQ6S545 545 aa16.56■□□□□ 0.24
SYT1-207ENST00000549559 THSD7AQ9UPZ6 1657 aa16.56■□□□□ 0.24
SYT1-207ENST00000549559 U2SURPO15042 1029 aaKnown RBP16.55■□□□□ 0.24
SYT1-207ENST00000549559 RAPGEF4Q8WZA2 1011 aa16.55■□□□□ 0.24
SYT1-207ENST00000549559 PARP4Q9UKK3 1724 aaKnown RBP16.55■□□□□ 0.24
SYT1-207ENST00000549559 KDRP35968 1356 aa16.54■□□□□ 0.24
SYT1-207ENST00000549559 A0A0G2JS52 829 aa16.54■□□□□ 0.24
SYT1-207ENST00000549559 ONECUT3O60422 494 aaPredicted RBP16.54■□□□□ 0.24
SYT1-207ENST00000549559 IL2RBP14784 551 aa16.54■□□□□ 0.24
SYT1-207ENST00000549559 MYT1Q01538 1121 aa16.54■□□□□ 0.24
SYT1-207ENST00000549559 PLEKHG2Q9H7P9 1386 aa16.53■□□□□ 0.24
SYT1-207ENST00000549559 SULT6B1Q6IMI4 303 aa16.53■□□□□ 0.24
SYT1-207ENST00000549559 OVOS2A0A0G2JMS6 1433 aa16.53■□□□□ 0.24
SYT1-207ENST00000549559 RGS12O14924 1447 aa16.53■□□□□ 0.24
SYT1-207ENST00000549559 MEGF6O75095 1541 aa16.52■□□□□ 0.24
SYT1-207ENST00000549559 U2AF1L5P0DN76 240 aaPredicted RBP16.52■□□□□ 0.24
SYT1-207ENST00000549559 TATP17735 454 aaPredicted RBP16.52■□□□□ 0.24
SYT1-207ENST00000549559 U2AF1Q01081 240 aaKnown RBP eCLIP16.52■□□□□ 0.24
SYT1-207ENST00000549559 SEPT12Q8IYM1 358 aa16.52■□□□□ 0.24
SYT1-207ENST00000549559 MRS2Q9HD23 443 aa16.52■□□□□ 0.24
SYT1-207ENST00000549559 WDR43Q15061 677 aaKnown RBP eCLIP16.51■□□□□ 0.23
SYT1-207ENST00000549559 AEBP1Q8IUX7 1158 aa16.51■□□□□ 0.23
SYT1-207ENST00000549559 LRRC37A3O60309 1634 aa16.51■□□□□ 0.23
SYT1-207ENST00000549559 TNS2Q63HR2 1409 aa16.51■□□□□ 0.23
SYT1-207ENST00000549559 HMOX1P09601 288 aa16.5■□□□□ 0.23
SYT1-207ENST00000549559 RBM42Q9BTD8 480 aaKnown RBP16.5■□□□□ 0.23
SYT1-207ENST00000549559 CCER2I3L3R5 266 aa16.49■□□□□ 0.23
SYT1-207ENST00000549559 DDB1Q16531 1140 aa16.49■□□□□ 0.23
SYT1-207ENST00000549559 PKD1L3Q7Z443 1732 aa16.48■□□□□ 0.23
SYT1-207ENST00000549559 EXOC5O00471 708 aa16.48■□□□□ 0.23
SYT1-207ENST00000549559 FCHSD2O94868 740 aa16.48■□□□□ 0.23
SYT1-207ENST00000549559 CCDC184Q52MB2 194 aa16.48■□□□□ 0.23
SYT1-207ENST00000549559 MIER1Q8N108 512 aa16.47■□□□□ 0.23
SYT1-207ENST00000549559 ZCRB1Q8TBF4 217 aaKnown RBP16.47■□□□□ 0.23
SYT1-207ENST00000549559 RSPH6AQ9H0K4 717 aa16.47■□□□□ 0.23
SYT1-207ENST00000549559 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.47■□□□□ 0.23
SYT1-207ENST00000549559 BRWD3Q6RI45 1802 aa16.47■□□□□ 0.23
SYT1-207ENST00000549559 PRKAR2BP31323 418 aa16.46■□□□□ 0.23
SYT1-207ENST00000549559 PDE3BQ13370 1112 aa16.46■□□□□ 0.23
SYT1-207ENST00000549559 AMOTQ4VCS5 1084 aa16.46■□□□□ 0.23
SYT1-207ENST00000549559 PNNQ9H307 717 aaKnown RBP16.46■□□□□ 0.23
SYT1-207ENST00000549559 SPG7Q9UQ90 795 aa16.46■□□□□ 0.23
SYT1-207ENST00000549559 PLEKHO1Q53GL0 409 aaPredicted RBP16.45■□□□□ 0.22
SYT1-207ENST00000549559 PCDH11XQ9BZA7 1347 aa16.45■□□□□ 0.22
SYT1-207ENST00000549559 PCDH11YQ9BZA8 1340 aa16.45■□□□□ 0.22
SYT1-207ENST00000549559 NEFMP07197 916 aa16.44■□□□□ 0.22
SYT1-207ENST00000549559 KRT27Q7Z3Y8 459 aa16.44■□□□□ 0.22
SYT1-207ENST00000549559 SHANK3Q9BYB0 1731 aa16.44■□□□□ 0.22
SYT1-207ENST00000549559 PNISRQ8TF01 805 aaKnown RBP16.43■□□□□ 0.22
SYT1-207ENST00000549559 ADAMTS8Q9UP79 889 aa16.43■□□□□ 0.22
SYT1-207ENST00000549559 MAPK8IP3Q9UPT6 1336 aa16.42■□□□□ 0.22
SYT1-207ENST00000549559 ZNF530Q6P9A1 599 aaPredicted RBP16.41■□□□□ 0.22
SYT1-207ENST00000549559 MARCH10Q8NA82 808 aaPredicted RBP16.41■□□□□ 0.22
SYT1-207ENST00000549559 GAS2L2Q8NHY3 880 aa16.41■□□□□ 0.22
SYT1-207ENST00000549559 DDX54Q8TDD1 881 aaKnown RBP16.41■□□□□ 0.22
SYT1-207ENST00000549559 IFNL2Q8IZJ0 200 aa16.4■□□□□ 0.22
SYT1-207ENST00000549559 PLEKHF1Q96S99 279 aa16.4■□□□□ 0.22
SYT1-207ENST00000549559 CYP27B1O15528 508 aa16.39■□□□□ 0.21
SYT1-207ENST00000549559 C1orf141Q5JVX7 400 aa16.39■□□□□ 0.21
SYT1-207ENST00000549559 BCL9O00512 1426 aa16.38■□□□□ 0.21
SYT1-207ENST00000549559 HSP90AB1P08238 724 aaKnown RBP16.38■□□□□ 0.21
SYT1-207ENST00000549559 PHKG2P15735 406 aa16.38■□□□□ 0.21
SYT1-207ENST00000549559 MTHFSDQ2M296 383 aaKnown RBP16.38■□□□□ 0.21
SYT1-207ENST00000549559 RUNDC1Q96C34 613 aa16.38■□□□□ 0.21
SYT1-207ENST00000549559 PHACTR3Q96KR7 559 aa16.38■□□□□ 0.21
SYT1-207ENST00000549559 ATXN8OSP0DMR3 200 aa16.37■□□□□ 0.21
SYT1-207ENST00000549559 AKAP4Q5JQC9 854 aa16.37■□□□□ 0.21
SYT1-207ENST00000549559 FAM196AQ6ZSG2 479 aa16.37■□□□□ 0.21
SYT1-207ENST00000549559 CCDC146Q8IYE0 955 aa16.37■□□□□ 0.21
SYT1-207ENST00000549559 FAM9BQ8IZU0 186 aa16.37■□□□□ 0.21
SYT1-207ENST00000549559 MAP3K5Q99683 1374 aa16.36■□□□□ 0.21
SYT1-207ENST00000549559 NKX1-1Q15270 411 aaPredicted RBP16.35■□□□□ 0.21
SYT1-207ENST00000549559 NFE2L2Q16236 605 aa16.35■□□□□ 0.21
SYT1-207ENST00000549559 FAM182BQ5T319 152 aa16.35■□□□□ 0.21
SYT1-207ENST00000549559 ILDR2Q71H61 639 aa16.34■□□□□ 0.21
SYT1-207ENST00000549559 DCAF5Q96JK2 942 aa16.34■□□□□ 0.21
SYT1-207ENST00000549559 DOT1LQ8TEK3 1739 aa16.33■□□□□ 0.21
SYT1-207ENST00000549559 GNAT3A8MTJ3 354 aa16.33■□□□□ 0.2
SYT1-207ENST00000549559 ZBTB12Q9Y330 459 aaPredicted RBP16.33■□□□□ 0.2
SYT1-207ENST00000549559 KAT6BQ8WYB5 2073 aa16.33■□□□□ 0.2
SYT1-207ENST00000549559 EP400Q96L91 3159 aa16.32■□□□□ 0.2
SYT1-207ENST00000549559 KDM6AO15550 1401 aaPredicted RBP16.32■□□□□ 0.2
SYT1-207ENST00000549559 NHSQ6T4R5 1651 aa16.32■□□□□ 0.2
SYT1-207ENST00000549559 SBF2Q86WG5 1849 aa16.32■□□□□ 0.2
SYT1-207ENST00000549559 DLG5Q8TDM6 1919 aa16.31■□□□□ 0.2
SYT1-207ENST00000549559 SCN11AQ9UI33 1791 aa16.31■□□□□ 0.2
SYT1-207ENST00000549559 TOGARAM1Q9Y4F4 1720 aa16.31■□□□□ 0.2
SYT1-207ENST00000549559 ADAMTS7Q9UKP4 1686 aa16.31■□□□□ 0.2
SYT1-207ENST00000549559 HTATSF1O43719 755 aaKnown RBP16.31■□□□□ 0.2
SYT1-207ENST00000549559 TMPOP42166 694 aaKnown RBP16.31■□□□□ 0.2
SYT1-207ENST00000549559 LMOD3Q0VAK6 560 aa16.31■□□□□ 0.2
SYT1-207ENST00000549559 RTF1Q92541 710 aaKnown RBP16.31■□□□□ 0.2
SYT1-207ENST00000549559 APAF1O14727 1248 aa16.3■□□□□ 0.2
SYT1-207ENST00000549559 MPRIPQ6WCQ1 1025 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms