RNA–Protein interactions for RNA: ENST00000549034.1

RAB5B-205, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-205ENST00000549034 KAT6BQ8WYB5 2073 aa12.91□□□□□ -0.34
RAB5B-205ENST00000549034 U2SURPO15042 1029 aaKnown RBP12.9□□□□□ -0.34
RAB5B-205ENST00000549034 SULT6B1Q6IMI4 303 aa12.9□□□□□ -0.34
RAB5B-205ENST00000549034 FAM208AQ9UK61 1670 aaKnown RBP12.89□□□□□ -0.35
RAB5B-205ENST00000549034 FAM196AQ6ZSG2 479 aa12.89□□□□□ -0.35
RAB5B-205ENST00000549034 MARCH10Q8NA82 808 aaPredicted RBP12.89□□□□□ -0.35
RAB5B-205ENST00000549034 UPF1Q92900 1129 aaKnown RBP eCLIP12.89□□□□□ -0.35
RAB5B-205ENST00000549034 NUDCQ9Y266 331 aa12.89□□□□□ -0.35
RAB5B-205ENST00000549034 PARD3Q8TEW0 1356 aa12.89□□□□□ -0.35
RAB5B-205ENST00000549034 THSD7AQ9UPZ6 1657 aa12.89□□□□□ -0.35
RAB5B-205ENST00000549034 HMOX1P09601 288 aa12.88□□□□□ -0.35
RAB5B-205ENST00000549034 PRKRIP1Q9H875 184 aaPredicted RBP12.88□□□□□ -0.35
RAB5B-205ENST00000549034 DISP2A7MBM2 1401 aa12.88□□□□□ -0.35
RAB5B-205ENST00000549034 IGSF1Q8N6C5 1336 aa12.88□□□□□ -0.35
RAB5B-205ENST00000549034 ANP32CO43423 234 aa12.87□□□□□ -0.35
RAB5B-205ENST00000549034 MYCNP04198 464 aaPredicted RBP12.87□□□□□ -0.35
RAB5B-205ENST00000549034 PARP4Q9UKK3 1724 aaKnown RBP12.87□□□□□ -0.35
RAB5B-205ENST00000549034 TRIM37O94972 964 aa12.86□□□□□ -0.35
RAB5B-205ENST00000549034 SF3B2Q13435 895 aaKnown RBP12.86□□□□□ -0.35
RAB5B-205ENST00000549034 AEBP1Q8IUX7 1158 aa12.86□□□□□ -0.35
RAB5B-205ENST00000549034 SPG7Q9UQ90 795 aa12.86□□□□□ -0.35
RAB5B-205ENST00000549034 MYBBP1AQ9BQG0 1328 aaKnown RBP12.86□□□□□ -0.35
RAB5B-205ENST00000549034 WNK3Q9BYP7 1800 aa12.85□□□□□ -0.35
RAB5B-205ENST00000549034 U2AF1L5P0DN76 240 aaPredicted RBP12.85□□□□□ -0.35
RAB5B-205ENST00000549034 U2AF1Q01081 240 aaKnown RBP eCLIP12.85□□□□□ -0.35
RAB5B-205ENST00000549034 PLEKHO1Q53GL0 409 aaPredicted RBP12.85□□□□□ -0.35
RAB5B-205ENST00000549034 CCDC125Q86Z20 511 aa12.85□□□□□ -0.35
RAB5B-205ENST00000549034 ACSBG1Q96GR2 724 aa12.84□□□□□ -0.35
RAB5B-205ENST00000549034 MEGF6O75095 1541 aa12.83□□□□□ -0.35
RAB5B-205ENST00000549034 C1QBPQ07021 282 aaKnown RBP12.83□□□□□ -0.36
RAB5B-205ENST00000549034 AMOTQ4VCS5 1084 aa12.83□□□□□ -0.36
RAB5B-205ENST00000549034 OVOS2A0A0G2JMS6 1433 aa12.82□□□□□ -0.36
RAB5B-205ENST00000549034 LRRC37A3O60309 1634 aa12.82□□□□□ -0.36
RAB5B-205ENST00000549034 APBA3O96018 575 aa12.82□□□□□ -0.36
RAB5B-205ENST00000549034 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.82□□□□□ -0.36
RAB5B-205ENST00000549034 TNS2Q63HR2 1409 aa12.81□□□□□ -0.36
RAB5B-205ENST00000549034 CYP27B1O15528 508 aa12.81□□□□□ -0.36
RAB5B-205ENST00000549034 KCNQ2O43526 872 aa12.81□□□□□ -0.36
RAB5B-205ENST00000549034 IFNL2Q8IZJ0 200 aa12.81□□□□□ -0.36
RAB5B-205ENST00000549034 PCDH11XQ9BZA7 1347 aa12.81□□□□□ -0.36
RAB5B-205ENST00000549034 PCDH11YQ9BZA8 1340 aa12.81□□□□□ -0.36
RAB5B-205ENST00000549034 NCAPD2Q15021 1401 aa12.8□□□□□ -0.36
RAB5B-205ENST00000549034 COL3A1P02461 1466 aaPredicted RBP12.8□□□□□ -0.36
RAB5B-205ENST00000549034 FCHSD2O94868 740 aa12.8□□□□□ -0.36
RAB5B-205ENST00000549034 PRIM1P49642 420 aaKnown RBP12.8□□□□□ -0.36
RAB5B-205ENST00000549034 ZNF530Q6P9A1 599 aaPredicted RBP12.8□□□□□ -0.36
RAB5B-205ENST00000549034 SYTL4Q96C24 671 aaPredicted RBP12.8□□□□□ -0.36
RAB5B-205ENST00000549034 PHKG2P15735 406 aa12.79□□□□□ -0.36
RAB5B-205ENST00000549034 PRKAR2BP31323 418 aa12.79□□□□□ -0.36
RAB5B-205ENST00000549034 C1orf141Q5JVX7 400 aa12.79□□□□□ -0.36
RAB5B-205ENST00000549034 PTF1AQ7RTS3 328 aa12.79□□□□□ -0.36
RAB5B-205ENST00000549034 DEFB132Q7Z7B7 95 aa12.79□□□□□ -0.36
RAB5B-205ENST00000549034 BCL11BQ9C0K0 894 aaPredicted RBP12.79□□□□□ -0.36
RAB5B-205ENST00000549034 RGPD1P0DJD0 1748 aa12.79□□□□□ -0.36
RAB5B-205ENST00000549034 BAG6P46379 1132 aa12.78□□□□□ -0.36
RAB5B-205ENST00000549034 EN1Q05925 392 aaPredicted RBP12.78□□□□□ -0.36
RAB5B-205ENST00000549034 MTHFSDQ2M296 383 aaKnown RBP12.78□□□□□ -0.36
RAB5B-205ENST00000549034 RSPH6AQ9H0K4 717 aa12.78□□□□□ -0.36
RAB5B-205ENST00000549034 PNNQ9H307 717 aaKnown RBP12.78□□□□□ -0.36
RAB5B-205ENST00000549034 SBF2Q86WG5 1849 aa12.78□□□□□ -0.36
RAB5B-205ENST00000549034 KDRP35968 1356 aa12.78□□□□□ -0.36
RAB5B-205ENST00000549034 NEFMP07197 916 aa12.77□□□□□ -0.37
RAB5B-205ENST00000549034 HSP90AB1P08238 724 aaKnown RBP12.77□□□□□ -0.37
RAB5B-205ENST00000549034 WDR43Q15061 677 aaKnown RBP eCLIP12.77□□□□□ -0.37
RAB5B-205ENST00000549034 NKX1-1Q15270 411 aaPredicted RBP12.77□□□□□ -0.37
RAB5B-205ENST00000549034 CCDC184Q52MB2 194 aa12.77□□□□□ -0.37
RAB5B-205ENST00000549034 PHACTR3Q96KR7 559 aa12.77□□□□□ -0.37
RAB5B-205ENST00000549034 AKAP4Q5JQC9 854 aa12.76□□□□□ -0.37
RAB5B-205ENST00000549034 MPRIPQ6WCQ1 1025 aa12.76□□□□□ -0.37
RAB5B-205ENST00000549034 SHANK3Q9BYB0 1731 aa12.76□□□□□ -0.37
RAB5B-205ENST00000549034 BCL9O00512 1426 aa12.75□□□□□ -0.37
RAB5B-205ENST00000549034 EZH2Q15910 746 aaKnown RBP12.75□□□□□ -0.37
RAB5B-205ENST00000549034 DIEXFQ68CQ4 756 aaKnown RBP12.75□□□□□ -0.37
RAB5B-205ENST00000549034 GAS2L2Q8NHY3 880 aa12.75□□□□□ -0.37
RAB5B-205ENST00000549034 ADAMTS8Q9UP79 889 aa12.75□□□□□ -0.37
RAB5B-205ENST00000549034 PKD1L3Q7Z443 1732 aa12.74□□□□□ -0.37
RAB5B-205ENST00000549034 DCAF5Q96JK2 942 aa12.74□□□□□ -0.37
RAB5B-205ENST00000549034 LGR6Q9HBX8 967 aa12.74□□□□□ -0.37
RAB5B-205ENST00000549034 MRS2Q9HD23 443 aa12.74□□□□□ -0.37
RAB5B-205ENST00000549034 PLEKHG2Q9H7P9 1386 aa12.73□□□□□ -0.37
RAB5B-205ENST00000549034 GNAT3A8MTJ3 354 aa12.73□□□□□ -0.37
RAB5B-205ENST00000549034 PLSCR1O15162 318 aa12.73□□□□□ -0.37
RAB5B-205ENST00000549034 CABP4P57796 275 aa12.73□□□□□ -0.37
RAB5B-205ENST00000549034 CAMKK2Q96RR4 588 aa12.73□□□□□ -0.37
RAB5B-205ENST00000549034 PLEKHF1Q96S99 279 aa12.73□□□□□ -0.37
RAB5B-205ENST00000549034 ERVV-2B6SEH9 535 aa12.72□□□□□ -0.37
RAB5B-205ENST00000549034 RNMTO43148 476 aaKnown RBP12.72□□□□□ -0.37
RAB5B-205ENST00000549034 CCDC146Q8IYE0 955 aa12.72□□□□□ -0.37
RAB5B-205ENST00000549034 PIGBQ92521 554 aa12.72□□□□□ -0.37
RAB5B-205ENST00000549034 TMOD3Q9NYL9 352 aa12.72□□□□□ -0.37
RAB5B-205ENST00000549034 MAPK8IP3Q9UPT6 1336 aa12.71□□□□□ -0.37
RAB5B-205ENST00000549034 SAMD1Q6SPF0 538 aaPredicted RBP12.71□□□□□ -0.37
RAB5B-205ENST00000549034 NFATC2IPQ8NCF5 419 aa12.71□□□□□ -0.37
RAB5B-205ENST00000549034 RTF1Q92541 710 aaKnown RBP12.71□□□□□ -0.37
RAB5B-205ENST00000549034 ITGB4P16144 1822 aa12.7□□□□□ -0.38
RAB5B-205ENST00000549034 RUNDC1Q96C34 613 aa12.7□□□□□ -0.38
RAB5B-205ENST00000549034 DOT1LQ8TEK3 1739 aa12.7□□□□□ -0.38
RAB5B-205ENST00000549034 TNS1Q9HBL0 1735 aaKnown RBP12.69□□□□□ -0.38
RAB5B-205ENST00000549034 NEUROD2Q15784 382 aa12.69□□□□□ -0.38
RAB5B-205ENST00000549034 TXNRD1Q16881 649 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms