RNA–Protein interactions for RNA: ENST00000547878.6

TMEM116-205, Transcript of transmembrane protein 116, humanhuman

TSL 2

Gene TMEM116, Length 1,716 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-205ENST00000547878 SBF2Q86WG5 1849 aa11.23□□□□□ -0.61
TMEM116-205ENST00000547878 CENPJQ9HC77 1338 aaPredicted RBP11.23□□□□□ -0.61
TMEM116-205ENST00000547878 WASLO00401 505 aaPredicted RBP11.23□□□□□ -0.61
TMEM116-205ENST00000547878 BACH2Q9BYV9 841 aa11.23□□□□□ -0.61
TMEM116-205ENST00000547878 KDM2BQ8NHM5 1336 aa11.22□□□□□ -0.61
TMEM116-205ENST00000547878 GOLGB1Q14789 3259 aaKnown RBP11.22□□□□□ -0.61
TMEM116-205ENST00000547878 PLSCR1O15162 318 aa11.22□□□□□ -0.61
TMEM116-205ENST00000547878 ADAMTS8Q9UP79 889 aa11.22□□□□□ -0.61
TMEM116-205ENST00000547878 CHD4Q14839 1912 aa11.22□□□□□ -0.61
TMEM116-205ENST00000547878 ATP7BP35670 1465 aa11.21□□□□□ -0.61
TMEM116-205ENST00000547878 WDR43Q15061 677 aaKnown RBP eCLIP11.21□□□□□ -0.61
TMEM116-205ENST00000547878 DUSP27Q5VZP5 1158 aa11.21□□□□□ -0.61
TMEM116-205ENST00000547878 OVOS2A0A0G2JMS6 1433 aa11.21□□□□□ -0.61
TMEM116-205ENST00000547878 OVOS2A0A0J9YW53 1432 aa11.21□□□□□ -0.61
TMEM116-205ENST00000547878 OVOS2Q6IE36 1432 aa11.21□□□□□ -0.61
TMEM116-205ENST00000547878 BRD2P25440 801 aaKnown RBP11.21□□□□□ -0.62
TMEM116-205ENST00000547878 PDE4AP27815 886 aa11.21□□□□□ -0.62
TMEM116-205ENST00000547878 TRMT2AQ8IZ69 625 aaKnown RBP11.21□□□□□ -0.62
TMEM116-205ENST00000547878 ZBTB47Q9UFB7 747 aaPredicted RBP11.21□□□□□ -0.62
TMEM116-205ENST00000547878 LRRC37A3O60309 1634 aa11.2□□□□□ -0.62
TMEM116-205ENST00000547878 HSP90AA2PQ14568 343 aaPredicted RBP11.2□□□□□ -0.62
TMEM116-205ENST00000547878 SGIP1Q9BQI5 828 aa11.2□□□□□ -0.62
TMEM116-205ENST00000547878 COL5A2P05997 1499 aaPredicted RBP11.19□□□□□ -0.62
TMEM116-205ENST00000547878 CALD1Q05682 793 aaKnown RBP11.19□□□□□ -0.62
TMEM116-205ENST00000547878 GOLGA2Q08379 1002 aa11.19□□□□□ -0.62
TMEM116-205ENST00000547878 THRAP3Q9Y2W1 955 aaKnown RBP11.19□□□□□ -0.62
TMEM116-205ENST00000547878 CPDO75976 1380 aa11.19□□□□□ -0.62
TMEM116-205ENST00000547878 CENPQQ7L2Z9 268 aaPredicted RBP11.18□□□□□ -0.62
TMEM116-205ENST00000547878 NUDT16Q96DE0 195 aaKnown RBP11.18□□□□□ -0.62
TMEM116-205ENST00000547878 CRBNQ96SW2 442 aa11.18□□□□□ -0.62
TMEM116-205ENST00000547878 POLR3AO14802 1390 aaPredicted RBP11.18□□□□□ -0.62
TMEM116-205ENST00000547878 ITSN1Q15811 1721 aa11.18□□□□□ -0.62
TMEM116-205ENST00000547878 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.18□□□□□ -0.62
TMEM116-205ENST00000547878 SLFN5Q08AF3 891 aa11.17□□□□□ -0.62
TMEM116-205ENST00000547878 USP19O94966 1318 aa11.17□□□□□ -0.62
TMEM116-205ENST00000547878 CRB1P82279 1406 aa11.16□□□□□ -0.62
TMEM116-205ENST00000547878 QRICH2Q9H0J4 1663 aa11.16□□□□□ -0.62
TMEM116-205ENST00000547878 SLC15A2Q16348 729 aa11.16□□□□□ -0.62
TMEM116-205ENST00000547878 MARCH10Q8NA82 808 aaPredicted RBP11.16□□□□□ -0.62
TMEM116-205ENST00000547878 ACEP12821 1306 aa11.16□□□□□ -0.62
TMEM116-205ENST00000547878 VIRMAQ69YN4 1812 aaKnown RBP11.15□□□□□ -0.62
TMEM116-205ENST00000547878 GIGYF1O75420 1035 aaPredicted RBP11.15□□□□□ -0.62
TMEM116-205ENST00000547878 TXNRD1Q16881 649 aa11.15□□□□□ -0.62
TMEM116-205ENST00000547878 NPM2Q86SE8 214 aaKnown RBP11.15□□□□□ -0.62
TMEM116-205ENST00000547878 MTFR1LQ9H019 292 aa11.15□□□□□ -0.62
TMEM116-205ENST00000547878 TOPAZ1Q8N9V7 1692 aa11.15□□□□□ -0.62
TMEM116-205ENST00000547878 PLIN1O60240 522 aa11.15□□□□□ -0.63
TMEM116-205ENST00000547878 DDB1Q16531 1140 aa11.15□□□□□ -0.63
TMEM116-205ENST00000547878 ABTB2Q8N961 1025 aa11.15□□□□□ -0.63
TMEM116-205ENST00000547878 STK32BQ9NY57 414 aa11.15□□□□□ -0.63
TMEM116-205ENST00000547878 SHANK3Q9BYB0 1731 aa11.14□□□□□ -0.63
TMEM116-205ENST00000547878 ARHGEF28Q8N1W1 1705 aaKnown RBP11.14□□□□□ -0.63
TMEM116-205ENST00000547878 GCP02774 474 aa11.14□□□□□ -0.63
TMEM116-205ENST00000547878 DDRGK1Q96HY6 314 aa11.14□□□□□ -0.63
TMEM116-205ENST00000547878 WNK3Q9BYP7 1800 aa11.13□□□□□ -0.63
TMEM116-205ENST00000547878 ZBTB7CA1YPR0 619 aa11.13□□□□□ -0.63
TMEM116-205ENST00000547878 E9PSI1 815 aa11.13□□□□□ -0.63
TMEM116-205ENST00000547878 PPM1GO15355 546 aaPredicted RBP11.12□□□□□ -0.63
TMEM116-205ENST00000547878 C20orf194Q5TEA3 1177 aa11.12□□□□□ -0.63
TMEM116-205ENST00000547878 CDK19Q9BWU1 502 aa11.12□□□□□ -0.63
TMEM116-205ENST00000547878 AKAP12Q02952 1782 aa11.12□□□□□ -0.63
TMEM116-205ENST00000547878 MAP3K5Q99683 1374 aa11.12□□□□□ -0.63
TMEM116-205ENST00000547878 NEFMP07197 916 aa11.12□□□□□ -0.63
TMEM116-205ENST00000547878 GPR162Q16538 588 aa11.12□□□□□ -0.63
TMEM116-205ENST00000547878 PUS7Q96PZ0 661 aaKnown RBP11.12□□□□□ -0.63
TMEM116-205ENST00000547878 BCL9O00512 1426 aa11.11□□□□□ -0.63
TMEM116-205ENST00000547878 NSD2O96028 1365 aa11.11□□□□□ -0.63
TMEM116-205ENST00000547878 IPO4Q8TEX9 1081 aaKnown RBP11.11□□□□□ -0.63
TMEM116-205ENST00000547878 PRDM4Q9UKN5 801 aa11.11□□□□□ -0.63
TMEM116-205ENST00000547878 PAPPAQ13219 1627 aa11.11□□□□□ -0.63
TMEM116-205ENST00000547878 PLEKHG3A1L390 1219 aa11.1□□□□□ -0.63
TMEM116-205ENST00000547878 TOM1L2Q6ZVM7 507 aa11.1□□□□□ -0.63
TMEM116-205ENST00000547878 CARD14Q9BXL6 1004 aa11.1□□□□□ -0.63
TMEM116-205ENST00000547878 AXIN2Q9Y2T1 843 aa11.1□□□□□ -0.63
TMEM116-205ENST00000547878 COL18A1P39060 1754 aa11.1□□□□□ -0.63
TMEM116-205ENST00000547878 AATKQ6ZMQ8 1374 aa11.1□□□□□ -0.63
TMEM116-205ENST00000547878 HSP90AA1P07900 732 aaKnown RBP11.09□□□□□ -0.63
TMEM116-205ENST00000547878 ZNF827Q17R98 1081 aa11.09□□□□□ -0.63
TMEM116-205ENST00000547878 NAP1L5Q96NT1 182 aaPredicted RBP11.09□□□□□ -0.63
TMEM116-205ENST00000547878 CCDC61Q9Y6R9 512 aa11.09□□□□□ -0.63
TMEM116-205ENST00000547878 NSD3Q9BZ95 1437 aa11.09□□□□□ -0.63
TMEM116-205ENST00000547878 NCLP19338 710 aaKnown RBP11.09□□□□□ -0.63
TMEM116-205ENST00000547878 PDE3AQ14432 1141 aa11.09□□□□□ -0.63
TMEM116-205ENST00000547878 CHMP4AQ9BY43 222 aa11.09□□□□□ -0.63
TMEM116-205ENST00000547878 BRPF3Q9ULD4 1205 aa11.09□□□□□ -0.63
TMEM116-205ENST00000547878 NAP1L2Q9ULW6 460 aaPredicted RBP11.09□□□□□ -0.63
TMEM116-205ENST00000547878 CGNL1Q0VF96 1302 aa11.08□□□□□ -0.64
TMEM116-205ENST00000547878 MAPK8IP2Q13387 824 aaPredicted RBP11.08□□□□□ -0.64
TMEM116-205ENST00000547878 GSE1Q14687 1217 aa11.08□□□□□ -0.64
TMEM116-205ENST00000547878 FAM161AQ3B820 660 aa11.08□□□□□ -0.64
TMEM116-205ENST00000547878 CNKSR2Q8WXI2 1034 aa11.08□□□□□ -0.64
TMEM116-205ENST00000547878 WDR17Q8IZU2 1322 aa11.07□□□□□ -0.64
TMEM116-205ENST00000547878 SLIT3O75094 1523 aa11.07□□□□□ -0.64
TMEM116-205ENST00000547878 APAF1O14727 1248 aa11.07□□□□□ -0.64
TMEM116-205ENST00000547878 C8orf34Q49A92 452 aa11.07□□□□□ -0.64
TMEM116-205ENST00000547878 NLGN2Q8NFZ4 835 aa11.07□□□□□ -0.64
TMEM116-205ENST00000547878 FBXO3Q9UK99 471 aa11.07□□□□□ -0.64
TMEM116-205ENST00000547878 ACSBG1Q96GR2 724 aa11.06□□□□□ -0.64
TMEM116-205ENST00000547878 NHSQ6T4R5 1651 aa11.06□□□□□ -0.64
TMEM116-205ENST00000547878 RGPD5Q99666 1765 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 233.7 ms