RNA–Protein interactions for RNA: ENST00000547310.1

LGR5-204, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 3

Gene LGR5, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-204ENST00000547310 ACDQ96AP0 544 aa9.71□□□□□ -0.86
LGR5-204ENST00000547310 CUEDC1Q9NWM3 386 aaPredicted RBP9.71□□□□□ -0.86
LGR5-204ENST00000547310 ATP1B4Q9UN42 357 aaPredicted RBP9.7□□□□□ -0.86
LGR5-204ENST00000547310 KRTAP4-8A0A0G2JLE6 195 aa9.69□□□□□ -0.86
LGR5-204ENST00000547310 BANK1Q8NDB2 785 aa9.69□□□□□ -0.86
LGR5-204ENST00000547310 HELBQ8NG08 1087 aaPredicted RBP9.69□□□□□ -0.86
LGR5-204ENST00000547310 INSM2Q96T92 566 aaPredicted RBP9.69□□□□□ -0.86
LGR5-204ENST00000547310 SH3BP5LQ7L8J4 393 aa9.68□□□□□ -0.86
LGR5-204ENST00000547310 SOCS7O14512 581 aa9.67□□□□□ -0.86
LGR5-204ENST00000547310 FOXR1Q6PIV2 292 aa9.67□□□□□ -0.86
LGR5-204ENST00000547310 OIP5O43482 229 aa9.66□□□□□ -0.86
LGR5-204ENST00000547310 ITGB7P26010 798 aa9.66□□□□□ -0.86
LGR5-204ENST00000547310 POLMQ9NP87 494 aaPredicted RBP9.66□□□□□ -0.86
LGR5-204ENST00000547310 CTDSPL2Q05D32 466 aa9.65□□□□□ -0.86
LGR5-204ENST00000547310 NBPF14Q5TI25 921 aa9.65□□□□□ -0.86
LGR5-204ENST00000547310 TRIM22Q8IYM9 498 aa9.65□□□□□ -0.86
LGR5-204ENST00000547310 SNRPNP63162 240 aaKnown RBP9.64□□□□□ -0.87
LGR5-204ENST00000547310 DHX9Q08211 1270 aaKnown RBP9.64□□□□□ -0.87
LGR5-204ENST00000547310 ZNF837Q96EG3 531 aaPredicted RBP9.64□□□□□ -0.87
LGR5-204ENST00000547310 AGBL1Q96MI9 1066 aa9.64□□□□□ -0.87
LGR5-204ENST00000547310 MKL2Q9ULH7 1088 aa9.64□□□□□ -0.87
LGR5-204ENST00000547310 PER1O15534 1290 aaPredicted RBP9.63□□□□□ -0.87
LGR5-204ENST00000547310 COL8A1P27658 744 aa9.63□□□□□ -0.87
LGR5-204ENST00000547310 RELBQ01201 579 aa9.63□□□□□ -0.87
LGR5-204ENST00000547310 AP1G2O75843 785 aa9.62□□□□□ -0.87
LGR5-204ENST00000547310 USP17L8P0C7I0 530 aa9.61□□□□□ -0.87
LGR5-204ENST00000547310 TSC1Q92574 1164 aa9.61□□□□□ -0.87
LGR5-204ENST00000547310 ZMYM1Q5SVZ6 1142 aa9.6□□□□□ -0.87
LGR5-204ENST00000547310 LYSMD3Q7Z3D4 306 aa9.6□□□□□ -0.87
LGR5-204ENST00000547310 CDV3Q9UKY7 258 aaKnown RBP9.6□□□□□ -0.87
LGR5-204ENST00000547310 NSFL1CQ9UNZ2 370 aaKnown RBP9.6□□□□□ -0.87
LGR5-204ENST00000547310 MAGEB6P1A0A0J9YX57 407 aa9.59□□□□□ -0.87
LGR5-204ENST00000547310 DBN1Q16643 649 aa9.59□□□□□ -0.87
LGR5-204ENST00000547310 ERFEQ4G0M1 354 aa9.59□□□□□ -0.87
LGR5-204ENST00000547310 FOXD4L5Q5VV16 416 aaPredicted RBP9.59□□□□□ -0.87
LGR5-204ENST00000547310 GPKOWQ92917 476 aaPredicted RBP eCLIP9.59□□□□□ -0.87
LGR5-204ENST00000547310 ZNF395Q9H8N7 513 aaPredicted RBP9.59□□□□□ -0.87
LGR5-204ENST00000547310 GPR25O00155 361 aa9.58□□□□□ -0.88
LGR5-204ENST00000547310 KRTAP19-1Q8IUB9 90 aa9.57□□□□□ -0.88
LGR5-204ENST00000547310 LRRN4Q8WUT4 740 aa9.57□□□□□ -0.88
LGR5-204ENST00000547310 KCTD15Q96SI1 283 aaPredicted RBP9.57□□□□□ -0.88
LGR5-204ENST00000547310 C1QTNF9BB2RNN3 333 aa9.56□□□□□ -0.88
LGR5-204ENST00000547310 FLIIQ13045 1269 aa9.56□□□□□ -0.88
LGR5-204ENST00000547310 SEMA6BQ9H3T3 888 aa9.56□□□□□ -0.88
LGR5-204ENST00000547310 H7C1W4 665 aa9.55□□□□□ -0.88
LGR5-204ENST00000547310 APBB1O00213 710 aa9.55□□□□□ -0.88
LGR5-204ENST00000547310 MX2P20592 715 aa9.55□□□□□ -0.88
LGR5-204ENST00000547310 MTMR14Q8NCE2 650 aa9.55□□□□□ -0.88
LGR5-204ENST00000547310 GJD4Q96KN9 370 aaPredicted RBP9.55□□□□□ -0.88
LGR5-204ENST00000547310 TRERF1Q96PN7 1200 aa9.55□□□□□ -0.88
LGR5-204ENST00000547310 HMX1Q9NP08 348 aaPredicted RBP9.55□□□□□ -0.88
LGR5-204ENST00000547310 MCM6Q14566 821 aa9.54□□□□□ -0.88
LGR5-204ENST00000547310 OXCT2Q9BYC2 517 aaPredicted RBP9.54□□□□□ -0.88
LGR5-204ENST00000547310 SNRKQ9NRH2 765 aa9.54□□□□□ -0.88
LGR5-204ENST00000547310 CD163Q86VB7 1156 aa9.53□□□□□ -0.88
LGR5-204ENST00000547310 TRIM34Q9BYJ4 488 aa9.53□□□□□ -0.88
LGR5-204ENST00000547310 PTGIRP43119 386 aa9.52□□□□□ -0.89
LGR5-204ENST00000547310 MAP2K3P46734 347 aa9.52□□□□□ -0.89
LGR5-204ENST00000547310 RNF144AP50876 292 aaPredicted RBP9.52□□□□□ -0.89
LGR5-204ENST00000547310 GTPBP3Q969Y2 492 aaKnown RBP9.52□□□□□ -0.89
LGR5-204ENST00000547310 GTF3C3Q9Y5Q9 886 aa9.52□□□□□ -0.89
LGR5-204ENST00000547310 ZC3H4Q9UPT8 1303 aaKnown RBP9.52□□□□□ -0.89
LGR5-204ENST00000547310 ADH1AP07327 375 aa9.51□□□□□ -0.89
LGR5-204ENST00000547310 LINC00114Q6XXX2 140 aa9.51□□□□□ -0.89
LGR5-204ENST00000547310 KDF1Q8NAX2 398 aaPredicted RBP9.51□□□□□ -0.89
LGR5-204ENST00000547310 CARD14Q9BXL6 1004 aa9.51□□□□□ -0.89
LGR5-204ENST00000547310 GOLGA2P5Q9HBQ8 144 aa9.51□□□□□ -0.89
LGR5-204ENST00000547310 SHISA8B8ZZ34 492 aa9.5□□□□□ -0.89
LGR5-204ENST00000547310 PIK3R2O00459 728 aa9.5□□□□□ -0.89
LGR5-204ENST00000547310 NR6A1Q15406 480 aa9.5□□□□□ -0.89
LGR5-204ENST00000547310 INTS6LQ5JSJ4 861 aaKnown RBP9.5□□□□□ -0.89
LGR5-204ENST00000547310 PNMA1Q8ND90 353 aa9.5□□□□□ -0.89
LGR5-204ENST00000547310 FKBPLQ9UIM3 349 aa9.5□□□□□ -0.89
LGR5-204ENST00000547310 PRICKLE2Q7Z3G6 844 aa9.49□□□□□ -0.89
LGR5-204ENST00000547310 EPS8L1Q8TE68 723 aa9.49□□□□□ -0.89
LGR5-204ENST00000547310 DYRK1BQ9Y463 629 aa9.49□□□□□ -0.89
LGR5-204ENST00000547310 GRIN2CQ14957 1233 aa9.48□□□□□ -0.89
LGR5-204ENST00000547310 PDXDC2PQ6P474 469 aa9.48□□□□□ -0.89
LGR5-204ENST00000547310 RIPOR1Q6ZS17 1223 aa9.48□□□□□ -0.89
LGR5-204ENST00000547310 NDUFB9Q9Y6M9 179 aa9.48□□□□□ -0.89
LGR5-204ENST00000547310 HOXB4P17483 251 aaPredicted RBP9.47□□□□□ -0.89
LGR5-204ENST00000547310 SLC10A4Q96EP9 437 aa9.47□□□□□ -0.89
LGR5-204ENST00000547310 SUV39H2Q9H5I1 410 aa9.47□□□□□ -0.89
LGR5-204ENST00000547310 PRM3Q9NNZ6 103 aa9.47□□□□□ -0.89
LGR5-204ENST00000547310 GPR37L1O60883 481 aa9.46□□□□□ -0.9
LGR5-204ENST00000547310 RHOQP17081 205 aa9.46□□□□□ -0.9
LGR5-204ENST00000547310 C1orf229Q6ZS94 237 aaPredicted RBP9.46□□□□□ -0.9
LGR5-204ENST00000547310 RRAGCQ9HB90 399 aa9.46□□□□□ -0.9
LGR5-204ENST00000547310 GDF2Q9UK05 429 aaPredicted RBP9.46□□□□□ -0.9
LGR5-204ENST00000547310 GPSM3Q9Y4H4 160 aa9.46□□□□□ -0.9
LGR5-204ENST00000547310 LILRA1O75019 489 aa9.45□□□□□ -0.9
LGR5-204ENST00000547310 ADD1P35611 737 aaKnown RBP9.45□□□□□ -0.9
LGR5-204ENST00000547310 CHRNA4P43681 627 aa9.45□□□□□ -0.9
LGR5-204ENST00000547310 DOC2BQ14184 412 aa9.45□□□□□ -0.9
LGR5-204ENST00000547310 ARTNQ5T4W7 220 aa9.45□□□□□ -0.9
LGR5-204ENST00000547310 EDARADDQ8WWZ3 215 aa9.45□□□□□ -0.9
LGR5-204ENST00000547310 CFHR5Q9BXR6 569 aa9.45□□□□□ -0.9
LGR5-204ENST00000547310 ZFP64Q9NPA5 681 aa9.45□□□□□ -0.9
LGR5-204ENST00000547310 FOXD4L6Q3SYB3 417 aaPredicted RBP9.44□□□□□ -0.9
LGR5-204ENST00000547310 FOXD4L3Q6VB84 417 aaPredicted RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms