RNA–Protein interactions for RNA: ENST00000547235.5

NPIPB12-202, Transcript of nuclear pore complex interacting protein family, member B12, humanhuman

TSL 3

Gene NPIPB12, Length 710 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB12-202ENST00000547235 UTRNP46939 3433 aa13.48□□□□□ -0.25
NPIPB12-202ENST00000547235 GIGYF1O75420 1035 aaPredicted RBP13.47□□□□□ -0.25
NPIPB12-202ENST00000547235 TOM1L2Q6ZVM7 507 aa13.47□□□□□ -0.25
NPIPB12-202ENST00000547235 MARCH10Q8NA82 808 aaPredicted RBP13.47□□□□□ -0.25
NPIPB12-202ENST00000547235 ARXQ96QS3 562 aa13.47□□□□□ -0.25
NPIPB12-202ENST00000547235 MAP3K5Q99683 1374 aa13.46□□□□□ -0.25
NPIPB12-202ENST00000547235 FAM9BQ8IZU0 186 aa13.46□□□□□ -0.25
NPIPB12-202ENST00000547235 KCNH5Q8NCM2 988 aa13.46□□□□□ -0.25
NPIPB12-202ENST00000547235 ZBTB7CA1YPR0 619 aa13.45□□□□□ -0.26
NPIPB12-202ENST00000547235 PNISRQ8TF01 805 aaKnown RBP13.45□□□□□ -0.26
NPIPB12-202ENST00000547235 POLKQ9UBT6 870 aa13.45□□□□□ -0.26
NPIPB12-202ENST00000547235 LRRC37A3O60309 1634 aa13.45□□□□□ -0.26
NPIPB12-202ENST00000547235 PIK3C2AO00443 1686 aa13.44□□□□□ -0.26
NPIPB12-202ENST00000547235 PPM1GO15355 546 aaPredicted RBP13.44□□□□□ -0.26
NPIPB12-202ENST00000547235 SOX12O15370 315 aa13.44□□□□□ -0.26
NPIPB12-202ENST00000547235 WDR43Q15061 677 aaKnown RBP eCLIP13.44□□□□□ -0.26
NPIPB12-202ENST00000547235 GPR162Q16538 588 aa13.44□□□□□ -0.26
NPIPB12-202ENST00000547235 WDR17Q8IZU2 1322 aa13.43□□□□□ -0.26
NPIPB12-202ENST00000547235 NUDCQ9Y266 331 aa13.43□□□□□ -0.26
NPIPB12-202ENST00000547235 SBF2Q86WG5 1849 aa13.43□□□□□ -0.26
NPIPB12-202ENST00000547235 EXOC5O00471 708 aa13.42□□□□□ -0.26
NPIPB12-202ENST00000547235 FBLN1P23142 703 aa13.42□□□□□ -0.26
NPIPB12-202ENST00000547235 RRS1Q15050 365 aaKnown RBP13.42□□□□□ -0.26
NPIPB12-202ENST00000547235 CHD4Q14839 1912 aa13.41□□□□□ -0.26
NPIPB12-202ENST00000547235 AMPHP49418 695 aa13.41□□□□□ -0.26
NPIPB12-202ENST00000547235 CARD10Q9BWT7 1032 aa13.41□□□□□ -0.26
NPIPB12-202ENST00000547235 EMILIN1Q9Y6C2 1016 aa13.41□□□□□ -0.26
NPIPB12-202ENST00000547235 USP54Q70EL1 1684 aa13.4□□□□□ -0.26
NPIPB12-202ENST00000547235 DIAPH1O60610 1272 aaKnown RBP13.4□□□□□ -0.26
NPIPB12-202ENST00000547235 YTHDC1Q96MU7 727 aaKnown RBP13.4□□□□□ -0.26
NPIPB12-202ENST00000547235 AXIN2Q9Y2T1 843 aa13.4□□□□□ -0.26
NPIPB12-202ENST00000547235 MAP3K19Q56UN5 1328 aa13.39□□□□□ -0.27
NPIPB12-202ENST00000547235 SMG6Q86US8 1419 aaKnown RBP13.39□□□□□ -0.27
NPIPB12-202ENST00000547235 SLIT3O75094 1523 aa13.39□□□□□ -0.27
NPIPB12-202ENST00000547235 INSRP06213 1382 aa13.39□□□□□ -0.27
NPIPB12-202ENST00000547235 CEP350Q5VT06 3117 aa13.39□□□□□ -0.27
NPIPB12-202ENST00000547235 MAP2P11137 1827 aaKnown RBP13.39□□□□□ -0.27
NPIPB12-202ENST00000547235 KIF24Q5T7B8 1368 aa13.38□□□□□ -0.27
NPIPB12-202ENST00000547235 CSB-PGBD3P0DP91 1061 aa13.38□□□□□ -0.27
NPIPB12-202ENST00000547235 POLD1P28340 1107 aa13.37□□□□□ -0.27
NPIPB12-202ENST00000547235 ARHGEF25Q86VW2 580 aa13.37□□□□□ -0.27
NPIPB12-202ENST00000547235 SLC16A10Q8TF71 515 aa13.37□□□□□ -0.27
NPIPB12-202ENST00000547235 ADAMTS8Q9UP79 889 aa13.37□□□□□ -0.27
NPIPB12-202ENST00000547235 FLT4P35916 1363 aa13.36□□□□□ -0.27
NPIPB12-202ENST00000547235 U2SURPO15042 1029 aaKnown RBP13.36□□□□□ -0.27
NPIPB12-202ENST00000547235 U2AF1L5P0DN76 240 aaPredicted RBP13.36□□□□□ -0.27
NPIPB12-202ENST00000547235 U2AF1Q01081 240 aaKnown RBP eCLIP13.36□□□□□ -0.27
NPIPB12-202ENST00000547235 PELP1Q8IZL8 1130 aaKnown RBP13.36□□□□□ -0.27
NPIPB12-202ENST00000547235 RTL1A6NKG5 1358 aa13.35□□□□□ -0.27
NPIPB12-202ENST00000547235 HOXC9P31274 260 aa13.35□□□□□ -0.27
NPIPB12-202ENST00000547235 KLHL34Q8N239 644 aa13.35□□□□□ -0.27
NPIPB12-202ENST00000547235 IP6K1Q92551 441 aa13.35□□□□□ -0.27
NPIPB12-202ENST00000547235 PNNQ9H307 717 aaKnown RBP13.35□□□□□ -0.27
NPIPB12-202ENST00000547235 TNS2Q63HR2 1409 aa13.35□□□□□ -0.27
NPIPB12-202ENST00000547235 NFAT5O94916 1531 aa13.34□□□□□ -0.27
NPIPB12-202ENST00000547235 IL13P35225 146 aa13.34□□□□□ -0.27
NPIPB12-202ENST00000547235 HNRNPUQ00839 825 aaKnown RBP eCLIP13.34□□□□□ -0.27
NPIPB12-202ENST00000547235 ZNF827Q17R98 1081 aa13.34□□□□□ -0.27
NPIPB12-202ENST00000547235 HSP90AB2PQ58FF8 381 aa13.34□□□□□ -0.27
NPIPB12-202ENST00000547235 ACSBG1Q96GR2 724 aa13.34□□□□□ -0.27
NPIPB12-202ENST00000547235 COL3A1P02461 1466 aaPredicted RBP13.34□□□□□ -0.27
NPIPB12-202ENST00000547235 COL18A1P39060 1754 aa13.33□□□□□ -0.28
NPIPB12-202ENST00000547235 GRIN3BO60391 1043 aa13.33□□□□□ -0.28
NPIPB12-202ENST00000547235 WNK3Q9BYP7 1800 aa13.33□□□□□ -0.28
NPIPB12-202ENST00000547235 PAPPAQ13219 1627 aa13.32□□□□□ -0.28
NPIPB12-202ENST00000547235 NEFMP07197 916 aa13.32□□□□□ -0.28
NPIPB12-202ENST00000547235 EIF4A2Q14240 407 aaKnown RBP13.32□□□□□ -0.28
NPIPB12-202ENST00000547235 AKT1S1Q96B36 256 aa13.32□□□□□ -0.28
NPIPB12-202ENST00000547235 SLC27A3Q5K4L6 730 aa13.31□□□□□ -0.28
NPIPB12-202ENST00000547235 LRRC4BQ9NT99 713 aa13.31□□□□□ -0.28
NPIPB12-202ENST00000547235 NHSQ6T4R5 1651 aa13.31□□□□□ -0.28
NPIPB12-202ENST00000547235 FCHSD2O94868 740 aa13.3□□□□□ -0.28
NPIPB12-202ENST00000547235 NLGN2Q8NFZ4 835 aa13.3□□□□□ -0.28
NPIPB12-202ENST00000547235 RUNDC1Q96C34 613 aa13.3□□□□□ -0.28
NPIPB12-202ENST00000547235 LTV1Q96GA3 475 aaPredicted RBP13.3□□□□□ -0.28
NPIPB12-202ENST00000547235 SHANK3Q9BYB0 1731 aa13.3□□□□□ -0.28
NPIPB12-202ENST00000547235 ABCC6O95255 1503 aa13.29□□□□□ -0.28
NPIPB12-202ENST00000547235 IL2RBP14784 551 aa13.29□□□□□ -0.28
NPIPB12-202ENST00000547235 PNPLA7Q6ZV29 1317 aa13.29□□□□□ -0.28
NPIPB12-202ENST00000547235 LTN1O94822 1766 aa13.28□□□□□ -0.28
NPIPB12-202ENST00000547235 CENPBP07199 599 aaPredicted RBP13.28□□□□□ -0.28
NPIPB12-202ENST00000547235 HSPA6P17066 643 aa13.28□□□□□ -0.28
NPIPB12-202ENST00000547235 CCDC146Q8IYE0 955 aa13.28□□□□□ -0.28
NPIPB12-202ENST00000547235 CNKSR2Q8WXI2 1034 aa13.28□□□□□ -0.28
NPIPB12-202ENST00000547235 TFCP2L1Q9NZI6 479 aa13.28□□□□□ -0.28
NPIPB12-202ENST00000547235 HMOX1P09601 288 aa13.27□□□□□ -0.29
NPIPB12-202ENST00000547235 YBX3P16989 372 aaKnown RBP eCLIP13.27□□□□□ -0.29
NPIPB12-202ENST00000547235 NGEFQ8N5V2 710 aa13.27□□□□□ -0.29
NPIPB12-202ENST00000547235 ANKRD24Q8TF21 1146 aa13.27□□□□□ -0.29
NPIPB12-202ENST00000547235 EYA1Q99502 592 aa13.27□□□□□ -0.29
NPIPB12-202ENST00000547235 GPBP1L1Q9HC44 474 aaPredicted RBP13.27□□□□□ -0.29
NPIPB12-202ENST00000547235 NLRP2Q9NX02 1062 aa13.27□□□□□ -0.29
NPIPB12-202ENST00000547235 MAPK8IP3Q9UPT6 1336 aa13.27□□□□□ -0.29
NPIPB12-202ENST00000547235 ATP10DQ9P241 1426 aa13.27□□□□□ -0.29
NPIPB12-202ENST00000547235 GOLGB1Q14789 3259 aaKnown RBP13.27□□□□□ -0.29
NPIPB12-202ENST00000547235 PRKAR2BP31323 418 aa13.26□□□□□ -0.29
NPIPB12-202ENST00000547235 SULT6B1Q6IMI4 303 aa13.26□□□□□ -0.29
NPIPB12-202ENST00000547235 RSPH6AQ9H0K4 717 aa13.26□□□□□ -0.29
NPIPB12-202ENST00000547235 ERBB3P21860 1342 aa13.25□□□□□ -0.29
NPIPB12-202ENST00000547235 ZBED9Q6R2W3 1325 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms