RNA–Protein interactions for RNA: ENST00000547055.1

RAB3IP-209, Transcript of RAB3A interacting protein, humanhuman

TSL 3

Gene RAB3IP, Length 438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-209ENST00000547055 PRM3Q9NNZ6 103 aa7.62□□□□□ -1.19
RAB3IP-209ENST00000547055 KDF1Q8NAX2 398 aaPredicted RBP7.61□□□□□ -1.19
RAB3IP-209ENST00000547055 RNF217Q8TC41 542 aa7.61□□□□□ -1.19
RAB3IP-209ENST00000547055 KRTAP9-6A0A140TA67 174 aa7.6□□□□□ -1.19
RAB3IP-209ENST00000547055 ATP5J2-PTCD1G3V325 749 aa7.6□□□□□ -1.19
RAB3IP-209ENST00000547055 CC2D2BQ6DHV5 1058 aa7.6□□□□□ -1.19
RAB3IP-209ENST00000547055 CCDC155Q8N6L0 562 aa7.6□□□□□ -1.19
RAB3IP-209ENST00000547055 TBC1D2BQ9UPU7 963 aa7.6□□□□□ -1.19
RAB3IP-209ENST00000547055 PCDHB11Q9Y5F2 797 aa7.59□□□□□ -1.19
RAB3IP-209ENST00000547055 SLC35F4A4IF30 521 aa7.58□□□□□ -1.2
RAB3IP-209ENST00000547055 ERVK-9P63128 1117 aa7.58□□□□□ -1.2
RAB3IP-209ENST00000547055 FOXD4L5Q5VV16 416 aaPredicted RBP7.58□□□□□ -1.2
RAB3IP-209ENST00000547055 ESF1Q9H501 851 aaKnown RBP7.58□□□□□ -1.2
RAB3IP-209ENST00000547055 LYSMD3Q7Z3D4 306 aa7.57□□□□□ -1.2
RAB3IP-209ENST00000547055 MEN1O00255 615 aa7.56□□□□□ -1.2
RAB3IP-209ENST00000547055 SCTRP47872 440 aa7.56□□□□□ -1.2
RAB3IP-209ENST00000547055 CEP126Q9P2H0 1117 aa7.56□□□□□ -1.2
RAB3IP-209ENST00000547055 A0A1W2PRU2 124 aa7.55□□□□□ -1.2
RAB3IP-209ENST00000547055 ITGA6P23229 1130 aa7.55□□□□□ -1.2
RAB3IP-209ENST00000547055 RNF144AP50876 292 aaPredicted RBP7.55□□□□□ -1.2
RAB3IP-209ENST00000547055 EIF4G2P78344 907 aaKnown RBP eCLIP7.55□□□□□ -1.2
RAB3IP-209ENST00000547055 PRICKLE2Q7Z3G6 844 aa7.55□□□□□ -1.2
RAB3IP-209ENST00000547055 CYP2U1Q7Z449 544 aa7.55□□□□□ -1.2
RAB3IP-209ENST00000547055 CDC14CA4D256 554 aa7.54□□□□□ -1.2
RAB3IP-209ENST00000547055 IRF5Q13568 498 aa7.54□□□□□ -1.2
RAB3IP-209ENST00000547055 GPR161Q8N6U8 529 aaKnown RBP7.54□□□□□ -1.2
RAB3IP-209ENST00000547055 NANOS1Q8WY41 292 aaKnown RBP7.54□□□□□ -1.2
RAB3IP-209ENST00000547055 NLRP3Q96P20 1036 aa7.54□□□□□ -1.2
RAB3IP-209ENST00000547055 PSMG3-AS1Q96PY0 264 aa7.54□□□□□ -1.2
RAB3IP-209ENST00000547055 GDPD2Q9HCC8 539 aa7.54□□□□□ -1.2
RAB3IP-209ENST00000547055 SENP3-EIF4A1A0A087X0R7 540 aa7.53□□□□□ -1.2
RAB3IP-209ENST00000547055 RHOQP17081 205 aa7.53□□□□□ -1.2
RAB3IP-209ENST00000547055 GPC1P35052 558 aa7.53□□□□□ -1.2
RAB3IP-209ENST00000547055 GPAT2Q6NUI2 795 aa7.53□□□□□ -1.2
RAB3IP-209ENST00000547055 KRTAP1-3Q8IUG1 177 aa7.53□□□□□ -1.2
RAB3IP-209ENST00000547055 VWA5B2Q8N398 1253 aa7.53□□□□□ -1.2
RAB3IP-209ENST00000547055 OSBPL3Q9H4L5 887 aa7.53□□□□□ -1.2
RAB3IP-209ENST00000547055 TRAK2O60296 914 aa7.52□□□□□ -1.21
RAB3IP-209ENST00000547055 MYCP01106 439 aaPredicted RBP7.52□□□□□ -1.21
RAB3IP-209ENST00000547055 ABL2P42684 1182 aa7.52□□□□□ -1.21
RAB3IP-209ENST00000547055 VAC14Q08AM6 782 aa7.52□□□□□ -1.21
RAB3IP-209ENST00000547055 SLC27A3Q5K4L6 730 aa7.52□□□□□ -1.21
RAB3IP-209ENST00000547055 SV2AQ7L0J3 742 aa7.52□□□□□ -1.21
RAB3IP-209ENST00000547055 CCDC85AQ96PX6 553 aaPredicted RBP7.52□□□□□ -1.21
RAB3IP-209ENST00000547055 RNF225M0QZC1 329 aaPredicted RBP7.51□□□□□ -1.21
RAB3IP-209ENST00000547055 IGHA1P01876 353 aa7.51□□□□□ -1.21
RAB3IP-209ENST00000547055 CLN3Q13286 438 aa7.51□□□□□ -1.21
RAB3IP-209ENST00000547055 MCM6Q14566 821 aa7.51□□□□□ -1.21
RAB3IP-209ENST00000547055 SLFNL1Q499Z3 407 aa7.51□□□□□ -1.21
RAB3IP-209ENST00000547055 CNTNAP3BQ96NU0 1288 aa7.51□□□□□ -1.21
RAB3IP-209ENST00000547055 CDCA7Q9BWT1 371 aaPredicted RBP7.51□□□□□ -1.21
RAB3IP-209ENST00000547055 COL25A1Q9BXS0 654 aaPredicted RBP7.51□□□□□ -1.21
RAB3IP-209ENST00000547055 CNTNAP3Q9BZ76 1288 aa7.51□□□□□ -1.21
RAB3IP-209ENST00000547055 ARHGEF10LQ9HCE6 1279 aa7.51□□□□□ -1.21
RAB3IP-209ENST00000547055 KRT76Q01546 638 aa7.5□□□□□ -1.21
RAB3IP-209ENST00000547055 GNRH1P01148 92 aa7.49□□□□□ -1.21
RAB3IP-209ENST00000547055 WASHC4Q2M389 1173 aa7.49□□□□□ -1.21
RAB3IP-209ENST00000547055 RNF135Q8IUD6 432 aa7.49□□□□□ -1.21
RAB3IP-209ENST00000547055 RAB6BQ9NRW1 208 aa7.49□□□□□ -1.21
RAB3IP-209ENST00000547055 DOLKQ9UPQ8 538 aa7.49□□□□□ -1.21
RAB3IP-209ENST00000547055 DNMT3AQ9Y6K1 912 aaPredicted RBP7.49□□□□□ -1.21
RAB3IP-209ENST00000547055 POU4F2Q12837 409 aa7.48□□□□□ -1.21
RAB3IP-209ENST00000547055 TSGA10IPQ3SY00 556 aa7.48□□□□□ -1.21
RAB3IP-209ENST00000547055 RNFT1Q5M7Z0 435 aa7.48□□□□□ -1.21
RAB3IP-209ENST00000547055 PHTF2Q8N3S3 785 aa7.48□□□□□ -1.21
RAB3IP-209ENST00000547055 GRIP2Q9C0E4 1043 aa7.48□□□□□ -1.21
RAB3IP-209ENST00000547055 USP4Q13107 963 aa7.47□□□□□ -1.21
RAB3IP-209ENST00000547055 RIPOR1Q6ZS17 1223 aa7.47□□□□□ -1.21
RAB3IP-209ENST00000547055 CNKSR1Q969H4 720 aa7.47□□□□□ -1.21
RAB3IP-209ENST00000547055 CUEDC1Q9NWM3 386 aaPredicted RBP7.47□□□□□ -1.21
RAB3IP-209ENST00000547055 IL2RAP01589 272 aa7.46□□□□□ -1.22
RAB3IP-209ENST00000547055 SEMA3FQ13275 785 aa7.46□□□□□ -1.22
RAB3IP-209ENST00000547055 OXLD1Q5BKU9 147 aa7.46□□□□□ -1.22
RAB3IP-209ENST00000547055 ESYT1Q9BSJ8 1104 aa7.46□□□□□ -1.22
RAB3IP-209ENST00000547055 ADAMTS8Q9UP79 889 aa7.46□□□□□ -1.22
RAB3IP-209ENST00000547055 DYRK1BQ9Y463 629 aa7.46□□□□□ -1.22
RAB3IP-209ENST00000547055 CENPCQ03188 943 aa7.45□□□□□ -1.22
RAB3IP-209ENST00000547055 NBPF10Q6P3W6 841 aaKnown RBP7.45□□□□□ -1.22
RAB3IP-209ENST00000547055 NBPF15Q8N660 670 aa7.45□□□□□ -1.22
RAB3IP-209ENST00000547055 SIRT1Q96EB6 747 aa7.45□□□□□ -1.22
RAB3IP-209ENST00000547055 GAS2L1Q99501 681 aaPredicted RBP7.45□□□□□ -1.22
RAB3IP-209ENST00000547055 COG6Q9Y2V7 657 aa7.45□□□□□ -1.22
RAB3IP-209ENST00000547055 SPATA31C2B4DYI2 1134 aa7.44□□□□□ -1.22
RAB3IP-209ENST00000547055 WASLO00401 505 aaPredicted RBP7.44□□□□□ -1.22
RAB3IP-209ENST00000547055 ADAM23O75077 832 aa7.44□□□□□ -1.22
RAB3IP-209ENST00000547055 SOX11P35716 441 aa7.44□□□□□ -1.22
RAB3IP-209ENST00000547055 ESCO1Q5FWF5 840 aa7.44□□□□□ -1.22
RAB3IP-209ENST00000547055 TAS1R3Q7RTX0 852 aa7.44□□□□□ -1.22
RAB3IP-209ENST00000547055 TRIM22Q8IYM9 498 aa7.44□□□□□ -1.22
RAB3IP-209ENST00000547055 GMCL1Q96IK5 515 aa7.44□□□□□ -1.22
RAB3IP-209ENST00000547055 TIMMDC1Q9NPL8 285 aa7.44□□□□□ -1.22
RAB3IP-209ENST00000547055 H7C1W4 665 aa7.43□□□□□ -1.22
RAB3IP-209ENST00000547055 GTF2E1P29083 439 aaPredicted RBP7.43□□□□□ -1.22
RAB3IP-209ENST00000547055 DBN1Q16643 649 aa7.43□□□□□ -1.22
RAB3IP-209ENST00000547055 WDR44Q5JSH3 913 aa7.43□□□□□ -1.22
RAB3IP-209ENST00000547055 ZNF837Q96EG3 531 aaPredicted RBP7.43□□□□□ -1.22
RAB3IP-209ENST00000547055 XAGE2Q96GT9 111 aa7.43□□□□□ -1.22
RAB3IP-209ENST00000547055 ZSCAN10Q96SZ4 725 aaPredicted RBP7.43□□□□□ -1.22
RAB3IP-209ENST00000547055 CHIC2Q9UKJ5 165 aa7.43□□□□□ -1.22
RAB3IP-209ENST00000547055 MAP7D1Q3KQU3 841 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms