RNA–Protein interactions for RNA: ENST00000546882.5

RFX4-207, Transcript of regulatory factor X4, humanhuman

TSL 3

Gene RFX4, Length 660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-207ENST00000546882 GCP02774 474 aa12.72□□□□□ -0.37
RFX4-207ENST00000546882 TOPAZ1Q8N9V7 1692 aa12.72□□□□□ -0.37
RFX4-207ENST00000546882 AATKQ6ZMQ8 1374 aa12.71□□□□□ -0.37
RFX4-207ENST00000546882 ABTB2Q8N961 1025 aa12.71□□□□□ -0.37
RFX4-207ENST00000546882 WNK3Q9BYP7 1800 aa12.7□□□□□ -0.38
RFX4-207ENST00000546882 PLEKHG3A1L390 1219 aa12.7□□□□□ -0.38
RFX4-207ENST00000546882 GPR162Q16538 588 aa12.7□□□□□ -0.38
RFX4-207ENST00000546882 TMEM106CQ9BVX2 250 aa12.7□□□□□ -0.38
RFX4-207ENST00000546882 AKAP12Q02952 1782 aa12.7□□□□□ -0.38
RFX4-207ENST00000546882 COL18A1P39060 1754 aa12.69□□□□□ -0.38
RFX4-207ENST00000546882 ARHGEF28Q8N1W1 1705 aaKnown RBP12.69□□□□□ -0.38
RFX4-207ENST00000546882 PAPPAQ13219 1627 aa12.69□□□□□ -0.38
RFX4-207ENST00000546882 CDK19Q9BWU1 502 aa12.68□□□□□ -0.38
RFX4-207ENST00000546882 NLRP13Q86W25 1043 aa12.67□□□□□ -0.38
RFX4-207ENST00000546882 COL24A1Q17RW2 1714 aa12.67□□□□□ -0.38
RFX4-207ENST00000546882 TOM1L2Q6ZVM7 507 aa12.66□□□□□ -0.38
RFX4-207ENST00000546882 AXIN2Q9Y2T1 843 aa12.66□□□□□ -0.38
RFX4-207ENST00000546882 RNF25Q96BH1 459 aaPredicted RBP12.65□□□□□ -0.38
RFX4-207ENST00000546882 CDCA7Q9BWT1 371 aaPredicted RBP12.65□□□□□ -0.38
RFX4-207ENST00000546882 TRIM35Q9UPQ4 493 aa12.65□□□□□ -0.38
RFX4-207ENST00000546882 WDR17Q8IZU2 1322 aa12.64□□□□□ -0.39
RFX4-207ENST00000546882 SLIT3O75094 1523 aa12.64□□□□□ -0.39
RFX4-207ENST00000546882 ZNF827Q17R98 1081 aa12.64□□□□□ -0.39
RFX4-207ENST00000546882 ECM2O94769 699 aaPredicted RBP12.63□□□□□ -0.39
RFX4-207ENST00000546882 PSEN1P49768 467 aa12.63□□□□□ -0.39
RFX4-207ENST00000546882 SLC39A7Q92504 469 aa12.63□□□□□ -0.39
RFX4-207ENST00000546882 NHSQ6T4R5 1651 aa12.63□□□□□ -0.39
RFX4-207ENST00000546882 RGPD5Q99666 1765 aa12.62□□□□□ -0.39
RFX4-207ENST00000546882 ZBTB7CA1YPR0 619 aa12.62□□□□□ -0.39
RFX4-207ENST00000546882 PDAP1Q13442 181 aaKnown RBP12.62□□□□□ -0.39
RFX4-207ENST00000546882 NLGN2Q8NFZ4 835 aa12.62□□□□□ -0.39
RFX4-207ENST00000546882 METRNQ9UJH8 293 aa12.62□□□□□ -0.39
RFX4-207ENST00000546882 EXOC5O00471 708 aa12.61□□□□□ -0.39
RFX4-207ENST00000546882 YBX3P16989 372 aaKnown RBP eCLIP12.61□□□□□ -0.39
RFX4-207ENST00000546882 HSPA6P17066 643 aa12.61□□□□□ -0.39
RFX4-207ENST00000546882 CARD10Q9BWT7 1032 aa12.61□□□□□ -0.39
RFX4-207ENST00000546882 LRRC4BQ9NT99 713 aa12.61□□□□□ -0.39
RFX4-207ENST00000546882 KDM2AQ9Y2K7 1162 aa12.61□□□□□ -0.39
RFX4-207ENST00000546882 QSER1Q2KHR3 1735 aa12.6□□□□□ -0.39
RFX4-207ENST00000546882 BRD4O60885 1362 aaPredicted RBP12.6□□□□□ -0.39
RFX4-207ENST00000546882 NLRP6P59044 892 aa12.6□□□□□ -0.39
RFX4-207ENST00000546882 DCAF11Q8TEB1 546 aa12.6□□□□□ -0.39
RFX4-207ENST00000546882 SLC16A10Q8TF71 515 aa12.6□□□□□ -0.39
RFX4-207ENST00000546882 ATP10DQ9P241 1426 aa12.6□□□□□ -0.39
RFX4-207ENST00000546882 BTAF1O14981 1849 aa12.6□□□□□ -0.39
RFX4-207ENST00000546882 KAT6BQ8WYB5 2073 aa12.59□□□□□ -0.39
RFX4-207ENST00000546882 RIOK3O14730 519 aaKnown RBP12.59□□□□□ -0.39
RFX4-207ENST00000546882 C7P10643 843 aa12.59□□□□□ -0.39
RFX4-207ENST00000546882 ARHGEF25Q86VW2 580 aa12.59□□□□□ -0.39
RFX4-207ENST00000546882 ACSBG1Q96GR2 724 aa12.59□□□□□ -0.39
RFX4-207ENST00000546882 PPIP5K1Q6PFW1 1433 aa12.59□□□□□ -0.39
RFX4-207ENST00000546882 CPSF1Q10570 1443 aaKnown RBP12.58□□□□□ -0.4
RFX4-207ENST00000546882 TNS2Q63HR2 1409 aa12.58□□□□□ -0.4
RFX4-207ENST00000546882 TRPM1Q7Z4N2 1603 aa12.58□□□□□ -0.4
RFX4-207ENST00000546882 TUBGCP6Q96RT7 1819 aa12.58□□□□□ -0.4
RFX4-207ENST00000546882 PIK3C2AO00443 1686 aa12.57□□□□□ -0.4
RFX4-207ENST00000546882 USP6P35125 1406 aa12.57□□□□□ -0.4
RFX4-207ENST00000546882 GRIN3BO60391 1043 aa12.57□□□□□ -0.4
RFX4-207ENST00000546882 POLD1P28340 1107 aa12.57□□□□□ -0.4
RFX4-207ENST00000546882 PNPLA7Q6ZV29 1317 aa12.57□□□□□ -0.4
RFX4-207ENST00000546882 LHX8Q68G74 356 aa12.56□□□□□ -0.4
RFX4-207ENST00000546882 STAC3Q96MF2 364 aa12.56□□□□□ -0.4
RFX4-207ENST00000546882 ADCY9O60503 1353 aa12.56□□□□□ -0.4
RFX4-207ENST00000546882 ABCC6O95255 1503 aa12.55□□□□□ -0.4
RFX4-207ENST00000546882 CCDC7Q96M83 1385 aa12.55□□□□□ -0.4
RFX4-207ENST00000546882 RGL2O15211 777 aa12.54□□□□□ -0.4
RFX4-207ENST00000546882 GPBP1L1Q9HC44 474 aaPredicted RBP12.54□□□□□ -0.4
RFX4-207ENST00000546882 CABP2Q9NPB3 220 aa12.54□□□□□ -0.4
RFX4-207ENST00000546882 CSB-PGBD3P0DP91 1061 aa12.53□□□□□ -0.4
RFX4-207ENST00000546882 SRPK2P78362 688 aaKnown RBP12.53□□□□□ -0.4
RFX4-207ENST00000546882 IER5LQ5T953 404 aa12.53□□□□□ -0.4
RFX4-207ENST00000546882 CABP1Q9NZU7 370 aa12.53□□□□□ -0.4
RFX4-207ENST00000546882 POTEFA5A3E0 1075 aa12.52□□□□□ -0.41
RFX4-207ENST00000546882 NFAT5O94916 1531 aa12.52□□□□□ -0.41
RFX4-207ENST00000546882 POTEB2H3BUK9 544 aa12.51□□□□□ -0.41
RFX4-207ENST00000546882 SLC27A3Q5K4L6 730 aa12.51□□□□□ -0.41
RFX4-207ENST00000546882 COLQQ9Y215 455 aaPredicted RBP12.51□□□□□ -0.41
RFX4-207ENST00000546882 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.5□□□□□ -0.41
RFX4-207ENST00000546882 KCNQ4P56696 695 aa12.5□□□□□ -0.41
RFX4-207ENST00000546882 DNAJC5GQ8N7S2 189 aa12.5□□□□□ -0.41
RFX4-207ENST00000546882 KCNH5Q8NCM2 988 aa12.5□□□□□ -0.41
RFX4-207ENST00000546882 ZFP91Q96JP5 570 aaPredicted RBP12.5□□□□□ -0.41
RFX4-207ENST00000546882 TFCP2L1Q9NZI6 479 aa12.5□□□□□ -0.41
RFX4-207ENST00000546882 QRICH2Q9H0J4 1663 aa12.5□□□□□ -0.41
RFX4-207ENST00000546882 KIAA1210Q9ULL0 1709 aa12.49□□□□□ -0.41
RFX4-207ENST00000546882 KIF3CO14782 793 aa12.49□□□□□ -0.41
RFX4-207ENST00000546882 NBPF1Q3BBV0 1214 aa12.49□□□□□ -0.41
RFX4-207ENST00000546882 ZNF526Q8TF50 670 aaPredicted RBP12.49□□□□□ -0.41
RFX4-207ENST00000546882 TTC21BQ7Z4L5 1316 aa12.48□□□□□ -0.41
RFX4-207ENST00000546882 SOX12O15370 315 aa12.48□□□□□ -0.41
RFX4-207ENST00000546882 SEC24BO95487 1268 aa12.48□□□□□ -0.41
RFX4-207ENST00000546882 GOLGA2Q08379 1002 aa12.48□□□□□ -0.41
RFX4-207ENST00000546882 LY75O60449 1722 aa12.48□□□□□ -0.41
RFX4-207ENST00000546882 ERBB3P21860 1342 aa12.47□□□□□ -0.41
RFX4-207ENST00000546882 IL2RBP14784 551 aa12.47□□□□□ -0.41
RFX4-207ENST00000546882 CENPJQ9HC77 1338 aaPredicted RBP12.46□□□□□ -0.41
RFX4-207ENST00000546882 APLP1P51693 650 aa12.46□□□□□ -0.41
RFX4-207ENST00000546882 IRX5P78411 483 aaPredicted RBP12.46□□□□□ -0.41
RFX4-207ENST00000546882 COL23A1Q86Y22 540 aaPredicted RBP12.46□□□□□ -0.41
RFX4-207ENST00000546882 PCNTO95613 3336 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms