RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 CCDC94Q9BW85 323 aaPredicted RBP15.14■□□□□ 0.01
PTCH1-212ENST00000546744 XRCC6P12956 609 aaKnown RBP eCLIP15.14■□□□□ 0.01
PTCH1-212ENST00000546744 FKBP5Q13451 457 aaPredicted RBP15.14■□□□□ 0.01
PTCH1-212ENST00000546744 XPCQ01831 940 aaPredicted RBP15.13■□□□□ 0.01
PTCH1-212ENST00000546744 NUTM2DQ5VT03 806 aaPredicted RBP15.13■□□□□ 0.01
PTCH1-212ENST00000546744 A0A0G2JS52 829 aa15.13■□□□□ 0.01
PTCH1-212ENST00000546744 SHTN1A0MZ66 631 aa15.13■□□□□ 0.01
PTCH1-212ENST00000546744 RALYLQ86SE5 291 aaKnown RBP15.13■□□□□ 0.01
PTCH1-212ENST00000546744 ZNHIT6Q9NWK9 470 aaKnown RBP15.13■□□□□ 0.01
PTCH1-212ENST00000546744 BCAR3O75815 825 aa15.13■□□□□ 0.01
PTCH1-212ENST00000546744 PPFIBP1Q86W92 1011 aa15.13■□□□□ 0.01
PTCH1-212ENST00000546744 ABCC11Q96J66 1382 aa15.12■□□□□ 0.01
PTCH1-212ENST00000546744 UBTFL1P0CB47 393 aaPredicted RBP15.12■□□□□ 0.01
PTCH1-212ENST00000546744 SFPQP23246 707 aaKnown RBP eCLIP15.12■□□□□ 0.01
PTCH1-212ENST00000546744 MICALCLQ6ZW33 695 aa15.12■□□□□ 0.01
PTCH1-212ENST00000546744 TOMM22Q9NS69 142 aa15.12■□□□□ 0.01
PTCH1-212ENST00000546744 CDC42BPBQ9Y5S2 1711 aa15.12■□□□□ 0.01
PTCH1-212ENST00000546744 PPP4R3BQ5MIZ7 849 aa15.12■□□□□ 0.01
PTCH1-212ENST00000546744 ABCC1P33527 1531 aa15.12■□□□□ 0.01
PTCH1-212ENST00000546744 SERPINC1P01008 464 aa15.12■□□□□ 0.01
PTCH1-212ENST00000546744 CLSTN1O94985 981 aa15.11■□□□□ 0.01
PTCH1-212ENST00000546744 CCT4P50991 539 aaKnown RBP15.11■□□□□ 0.01
PTCH1-212ENST00000546744 TUBB4BP68371 445 aa15.11■□□□□ 0.01
PTCH1-212ENST00000546744 STK38Q15208 465 aa15.11■□□□□ 0.01
PTCH1-212ENST00000546744 LMOD2Q6P5Q4 547 aa15.11■□□□□ 0.01
PTCH1-212ENST00000546744 CCDC171Q6TFL3 1326 aa15.11■□□□□ 0.01
PTCH1-212ENST00000546744 MARCH6O60337 910 aa15.11■□□□□ 0.01
PTCH1-212ENST00000546744 IVLP07476 585 aa15.11■□□□□ 0.01
PTCH1-212ENST00000546744 EXOSC9Q06265 439 aaKnown RBP15.11■□□□□ 0.01
PTCH1-212ENST00000546744 KRT32Q14532 448 aa15.11■□□□□ 0.01
PTCH1-212ENST00000546744 BRMS1Q9HCU9 246 aa15.11■□□□□ 0.01
PTCH1-212ENST00000546744 GPRASP1Q5JY77 1395 aa15.11■□□□□ 0.01
PTCH1-212ENST00000546744 SOX12O15370 315 aa15.1■□□□□ 0.01
PTCH1-212ENST00000546744 ATP7AQ04656 1500 aa15.1■□□□□ 0.01
PTCH1-212ENST00000546744 A2MP01023 1474 aa15.1■□□□□ 0.01
PTCH1-212ENST00000546744 ARHGEF12Q9NZN5 1544 aa15.1■□□□□ 0.01
PTCH1-212ENST00000546744 NPHP1O15259 732 aa15.1■□□□□ 0.01
PTCH1-212ENST00000546744 GNAI2P04899 355 aa15.1■□□□□ 0.01
PTCH1-212ENST00000546744 TEFQ10587 303 aa15.1■□□□□ 0.01
PTCH1-212ENST00000546744 SNX21Q969T3 373 aa15.1■□□□□ 0.01
PTCH1-212ENST00000546744 UPF3BQ9BZI7 483 aaKnown RBP15.1■□□□□ 0.01
PTCH1-212ENST00000546744 LRRCC1Q9C099 1032 aa15.1■□□□□ 0.01
PTCH1-212ENST00000546744 DDX19AQ9NUU7 478 aaKnown RBP15.1■□□□□ 0.01
PTCH1-212ENST00000546744 ERICH4A6NGS2 130 aa15.1■□□□□ 0.01
PTCH1-212ENST00000546744 TNNT1P13805 278 aa15.1■□□□□ 0.01
PTCH1-212ENST00000546744 HSP90AB3PQ58FF7 597 aa15.1■□□□□ 0.01
PTCH1-212ENST00000546744 SH2B1Q9NRF2 756 aaPredicted RBP15.1■□□□□ 0.01
PTCH1-212ENST00000546744 ANO10Q9NW15 660 aa15.1■□□□□ 0.01
PTCH1-212ENST00000546744 JAKMIP3Q5VZ66 844 aa15.09■□□□□ 0.01
PTCH1-212ENST00000546744 LARP1BQ659C4 914 aaKnown RBP15.09■□□□□ 0.01
PTCH1-212ENST00000546744 SPATA32Q96LK8 384 aa15.09■□□□□ 0.01
PTCH1-212ENST00000546744 ERICH2A1L162 156 aa15.09■□□□□ 0.01
PTCH1-212ENST00000546744 NOL10Q9BSC4 688 aaKnown RBP15.09■□□□□ 0.01
PTCH1-212ENST00000546744 CRACR2AQ9BSW2 395 aa15.09■□□□□ 0.01
PTCH1-212ENST00000546744 BMP2KLQ5H9B9 411 aa15.09■□□□□ 0.01
PTCH1-212ENST00000546744 MTHFSP49914 203 aa15.08■□□□□ 0.01
PTCH1-212ENST00000546744 CCDC27Q2M243 656 aa15.08■□□□□ 0.01
PTCH1-212ENST00000546744 CCDC184Q52MB2 194 aa15.08■□□□□ 0.01
PTCH1-212ENST00000546744 LRSAM1Q6UWE0 723 aa15.08■□□□□ 0.01
PTCH1-212ENST00000546744 TTLL5Q6EMB2 1281 aa15.08■□□□□ 0
PTCH1-212ENST00000546744 PATL2C9JE40 543 aaKnown RBP15.08■□□□□ 0
PTCH1-212ENST00000546744 BAG4O95429 457 aaKnown RBP15.08■□□□□ 0
PTCH1-212ENST00000546744 ALDH1L2Q3SY69 923 aa15.07■□□□□ 0
PTCH1-212ENST00000546744 SRRTQ9BXP5 876 aaKnown RBP15.07■□□□□ 0
PTCH1-212ENST00000546744 CCDC83Q8IWF9 413 aa15.07■□□□□ 0
PTCH1-212ENST00000546744 PRDM10Q9NQV6 1147 aa15.07■□□□□ 0
PTCH1-212ENST00000546744 ZHX1Q9UKY1 873 aaPredicted RBP15.07■□□□□ 0
PTCH1-212ENST00000546744 NAP1L1P55209 391 aaKnown RBP15.06■□□□□ 0
PTCH1-212ENST00000546744 BBXQ8WY36 941 aaPredicted RBP15.06■□□□□ 0
PTCH1-212ENST00000546744 CCDC102AQ96A19 550 aa15.06■□□□□ 0
PTCH1-212ENST00000546744 CROCC2H7BZ55 1655 aa15.06■□□□□ 0
PTCH1-212ENST00000546744 NOB1Q9ULX3 412 aaKnown RBP15.06■□□□□ 0
PTCH1-212ENST00000546744 TEX14Q8IWB6 1497 aa15.06■□□□□ 0
PTCH1-212ENST00000546744 TWISTNBQ3B726 338 aaPredicted RBP15.06■□□□□ 0
PTCH1-212ENST00000546744 CCDC30Q5VVM6 783 aa15.06■□□□□ 0
PTCH1-212ENST00000546744 CCDC148Q8NFR7 591 aa15.06■□□□□ 0
PTCH1-212ENST00000546744 ARAP3Q8WWN8 1544 aa15.06■□□□□ 0
PTCH1-212ENST00000546744 TXLNAP40222 546 aa15.06■□□□□ 0
PTCH1-212ENST00000546744 MAGEC2Q9UBF1 373 aaPredicted RBP15.06■□□□□ 0
PTCH1-212ENST00000546744 TUBBP07437 444 aa15.05■□□□□ 0
PTCH1-212ENST00000546744 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.05■□□□□ 0
PTCH1-212ENST00000546744 POGZQ7Z3K3 1410 aa15.05■□□□□ -0
PTCH1-212ENST00000546744 NEO1Q92859 1461 aa15.04■□□□□ -0
PTCH1-212ENST00000546744 TSPYL4Q9UJ04 414 aa15.04■□□□□ -0
PTCH1-212ENST00000546744 NOLC1Q14978 699 aaKnown RBP eCLIP15.04■□□□□ -0
PTCH1-212ENST00000546744 ME1P48163 572 aa15.03■□□□□ -0
PTCH1-212ENST00000546744 STIM1Q13586 685 aa15.03■□□□□ -0
PTCH1-212ENST00000546744 SART3Q15020 963 aaKnown RBP15.03■□□□□ -0
PTCH1-212ENST00000546744 C1orf141Q5JVX7 400 aa15.03■□□□□ -0
PTCH1-212ENST00000546744 BLOC1S2Q6QNY1 142 aa15.03■□□□□ -0
PTCH1-212ENST00000546744 FSD1Q9BTV5 496 aa15.03■□□□□ -0
PTCH1-212ENST00000546744 GABPB1Q06547 395 aaPredicted RBP15.03■□□□□ -0
PTCH1-212ENST00000546744 ARHGAP29Q52LW3 1261 aa15.03■□□□□ -0
PTCH1-212ENST00000546744 NFXL1Q6ZNB6 911 aa15.03■□□□□ -0
PTCH1-212ENST00000546744 CCDC181Q5TID7 509 aa15.03■□□□□ -0
PTCH1-212ENST00000546744 NGDNQ8NEJ9 315 aaKnown RBP15.03■□□□□ -0
PTCH1-212ENST00000546744 V9GYY5 206 aaPredicted RBP15.03■□□□□ -0
PTCH1-212ENST00000546744 POLR3GO15318 223 aaPredicted RBP15.03■□□□□ -0
PTCH1-212ENST00000546744 SURF6O75683 361 aaKnown RBP15.03■□□□□ -0
PTCH1-212ENST00000546744 OGFRQ9NZT2 677 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms