RNA–Protein interactions for RNA: ENST00000546202.5

PPP1CA-211, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 4

Gene PPP1CA, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-211ENST00000546202 GJD4Q96KN9 370 aaPredicted RBP21.58■■□□□ 1.05
PPP1CA-211ENST00000546202 DLG5Q8TDM6 1919 aa21.58■■□□□ 1.04
PPP1CA-211ENST00000546202 TCP11L2Q8N4U5 519 aa21.57■■□□□ 1.04
PPP1CA-211ENST00000546202 RAPGEF4Q8WZA2 1011 aa21.57■■□□□ 1.04
PPP1CA-211ENST00000546202 PHACTR3Q96KR7 559 aa21.57■■□□□ 1.04
PPP1CA-211ENST00000546202 THRAP3Q9Y2W1 955 aaKnown RBP21.57■■□□□ 1.04
PPP1CA-211ENST00000546202 GLI3P10071 1580 aa21.57■■□□□ 1.04
PPP1CA-211ENST00000546202 MAPK8IP3Q9UPT6 1336 aa21.56■■□□□ 1.04
PPP1CA-211ENST00000546202 OVOS2A0A0G2JMS6 1433 aa21.56■■□□□ 1.04
PPP1CA-211ENST00000546202 SHANK3Q9BYB0 1731 aa21.55■■□□□ 1.04
PPP1CA-211ENST00000546202 NEFMP07197 916 aa21.55■■□□□ 1.04
PPP1CA-211ENST00000546202 IL2RBP14784 551 aa21.55■■□□□ 1.04
PPP1CA-211ENST00000546202 TATP17735 454 aaPredicted RBP21.55■■□□□ 1.04
PPP1CA-211ENST00000546202 USP35Q9P2H5 1018 aa21.55■■□□□ 1.04
PPP1CA-211ENST00000546202 EP400Q96L91 3159 aa21.54■■□□□ 1.04
PPP1CA-211ENST00000546202 APAF1O14727 1248 aa21.54■■□□□ 1.04
PPP1CA-211ENST00000546202 BARGINQ6ZT62 677 aa21.54■■□□□ 1.04
PPP1CA-211ENST00000546202 CCDC9Q9Y3X0 531 aaKnown RBP21.54■■□□□ 1.04
PPP1CA-211ENST00000546202 DEFB132Q7Z7B7 95 aa21.53■■□□□ 1.04
PPP1CA-211ENST00000546202 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.53■■□□□ 1.04
PPP1CA-211ENST00000546202 PLEKHO1Q53GL0 409 aaPredicted RBP21.52■■□□□ 1.04
PPP1CA-211ENST00000546202 CDCA7Q9BWT1 371 aaPredicted RBP21.52■■□□□ 1.04
PPP1CA-211ENST00000546202 THSD7AQ9UPZ6 1657 aa21.52■■□□□ 1.04
PPP1CA-211ENST00000546202 TMPOP42166 694 aaKnown RBP21.51■■□□□ 1.03
PPP1CA-211ENST00000546202 NFE2L2Q16236 605 aa21.51■■□□□ 1.03
PPP1CA-211ENST00000546202 AMOTQ4VCS5 1084 aa21.51■■□□□ 1.03
PPP1CA-211ENST00000546202 NCBP3Q53F19 620 aaKnown RBP21.51■■□□□ 1.03
PPP1CA-211ENST00000546202 LRRC37A3O60309 1634 aa21.51■■□□□ 1.03
PPP1CA-211ENST00000546202 MTHFSDQ2M296 383 aaKnown RBP21.5■■□□□ 1.03
PPP1CA-211ENST00000546202 NGEFQ8N5V2 710 aa21.5■■□□□ 1.03
PPP1CA-211ENST00000546202 GAS2L2Q8NHY3 880 aa21.5■■□□□ 1.03
PPP1CA-211ENST00000546202 VIRMAQ69YN4 1812 aaKnown RBP21.5■■□□□ 1.03
PPP1CA-211ENST00000546202 HNRNPUQ00839 825 aaKnown RBP eCLIP21.48■■□□□ 1.03
PPP1CA-211ENST00000546202 SPG7Q9UQ90 795 aa21.48■■□□□ 1.03
PPP1CA-211ENST00000546202 RRP7AQ9Y3A4 280 aaKnown RBP21.47■■□□□ 1.03
PPP1CA-211ENST00000546202 TNS2Q63HR2 1409 aa21.46■■□□□ 1.03
PPP1CA-211ENST00000546202 ONECUT3O60422 494 aaPredicted RBP21.46■■□□□ 1.03
PPP1CA-211ENST00000546202 FAM98CQ17RN3 349 aaKnown RBP21.46■■□□□ 1.03
PPP1CA-211ENST00000546202 ZCRB1Q8TBF4 217 aaKnown RBP21.46■■□□□ 1.03
PPP1CA-211ENST00000546202 ADAMTS7Q9UKP4 1686 aa21.46■■□□□ 1.03
PPP1CA-211ENST00000546202 SENP3-EIF4A1A0A087X0R7 540 aa21.45■■□□□ 1.02
PPP1CA-211ENST00000546202 RIPK4P57078 832 aa21.45■■□□□ 1.02
PPP1CA-211ENST00000546202 CCDC27Q2M243 656 aa21.45■■□□□ 1.02
PPP1CA-211ENST00000546202 ZNF530Q6P9A1 599 aaPredicted RBP21.45■■□□□ 1.02
PPP1CA-211ENST00000546202 MAP3K5Q99683 1374 aa21.44■■□□□ 1.02
PPP1CA-211ENST00000546202 SCN11AQ9UI33 1791 aa21.43■■□□□ 1.02
PPP1CA-211ENST00000546202 NEUROD2Q15784 382 aa21.43■■□□□ 1.02
PPP1CA-211ENST00000546202 AKAP4Q5JQC9 854 aa21.43■■□□□ 1.02
PPP1CA-211ENST00000546202 SEPT12Q8IYM1 358 aa21.43■■□□□ 1.02
PPP1CA-211ENST00000546202 YTHDC1Q96MU7 727 aaKnown RBP21.43■■□□□ 1.02
PPP1CA-211ENST00000546202 TRIM35Q9UPQ4 493 aa21.43■■□□□ 1.02
PPP1CA-211ENST00000546202 PCDH11XQ9BZA7 1347 aa21.43■■□□□ 1.02
PPP1CA-211ENST00000546202 PCDH11YQ9BZA8 1340 aa21.43■■□□□ 1.02
PPP1CA-211ENST00000546202 CYP27B1O15528 508 aa21.42■■□□□ 1.02
PPP1CA-211ENST00000546202 HTATSF1O43719 755 aaKnown RBP21.42■■□□□ 1.02
PPP1CA-211ENST00000546202 ZBED9Q6R2W3 1325 aa21.41■■□□□ 1.02
PPP1CA-211ENST00000546202 ZNF521Q96K83 1311 aa21.41■■□□□ 1.02
PPP1CA-211ENST00000546202 GNAT3A8MTJ3 354 aa21.41■■□□□ 1.02
PPP1CA-211ENST00000546202 EXOC5O00471 708 aa21.41■■□□□ 1.02
PPP1CA-211ENST00000546202 PHKG2P15735 406 aa21.41■■□□□ 1.02
PPP1CA-211ENST00000546202 LMOD3Q0VAK6 560 aa21.41■■□□□ 1.02
PPP1CA-211ENST00000546202 DDB1Q16531 1140 aa21.41■■□□□ 1.02
PPP1CA-211ENST00000546202 C1orf141Q5JVX7 400 aa21.41■■□□□ 1.02
PPP1CA-211ENST00000546202 IFNL2Q8IZJ0 200 aa21.41■■□□□ 1.02
PPP1CA-211ENST00000546202 SALL2Q9Y467 1007 aaPredicted RBP21.4■■□□□ 1.02
PPP1CA-211ENST00000546202 BRWD3Q6RI45 1802 aa21.4■■□□□ 1.02
PPP1CA-211ENST00000546202 SF3B2Q13435 895 aaKnown RBP21.39■■□□□ 1.01
PPP1CA-211ENST00000546202 WWC1Q8IX03 1113 aa21.39■■□□□ 1.01
PPP1CA-211ENST00000546202 NKX1-1Q15270 411 aaPredicted RBP21.38■■□□□ 1.01
PPP1CA-211ENST00000546202 DDX54Q8TDD1 881 aaKnown RBP21.37■■□□□ 1.01
PPP1CA-211ENST00000546202 RTF1Q92541 710 aaKnown RBP21.37■■□□□ 1.01
PPP1CA-211ENST00000546202 SIPA1L3O60292 1781 aaPredicted RBP21.37■■□□□ 1.01
PPP1CA-211ENST00000546202 TOGARAM1Q9Y4F4 1720 aa21.37■■□□□ 1.01
PPP1CA-211ENST00000546202 KDM6AO15550 1401 aaPredicted RBP21.37■■□□□ 1.01
PPP1CA-211ENST00000546202 CEMIPQ8WUJ3 1361 aa21.36■■□□□ 1.01
PPP1CA-211ENST00000546202 PSDA5PKW4 1024 aaPredicted RBP21.36■■□□□ 1.01
PPP1CA-211ENST00000546202 HSP90AB1P08238 724 aaKnown RBP21.36■■□□□ 1.01
PPP1CA-211ENST00000546202 IL17REQ8NFR9 667 aa21.36■■□□□ 1.01
PPP1CA-211ENST00000546202 DCTN1Q14203 1278 aa21.35■■□□□ 1.01
PPP1CA-211ENST00000546202 MCM10Q7L590 875 aa21.35■■□□□ 1.01
PPP1CA-211ENST00000546202 WDR63Q8IWG1 891 aa21.35■■□□□ 1.01
PPP1CA-211ENST00000546202 DCAF5Q96JK2 942 aa21.35■■□□□ 1.01
PPP1CA-211ENST00000546202 A0A0G2JS52 829 aa21.34■■□□□ 1.01
PPP1CA-211ENST00000546202 RNMTO43148 476 aaKnown RBP21.34■■□□□ 1.01
PPP1CA-211ENST00000546202 MYT1Q01538 1121 aa21.34■■□□□ 1.01
PPP1CA-211ENST00000546202 MPRIPQ6WCQ1 1025 aa21.34■■□□□ 1.01
PPP1CA-211ENST00000546202 MRC1P22897 1456 aa21.33■■□□□ 1.01
PPP1CA-211ENST00000546202 KRT27Q7Z3Y8 459 aa21.33■■□□□ 1.01
PPP1CA-211ENST00000546202 MARCH10Q8NA82 808 aaPredicted RBP21.33■■□□□ 1.01
PPP1CA-211ENST00000546202 THUMPD2Q9BTF0 503 aaKnown RBP21.33■■□□□ 1.01
PPP1CA-211ENST00000546202 LGR6Q9HBX8 967 aa21.33■■□□□ 1.01
PPP1CA-211ENST00000546202 ITGB4P16144 1822 aa21.33■■□□□ 1.01
PPP1CA-211ENST00000546202 DOT1LQ8TEK3 1739 aa21.32■■□□□ 1
PPP1CA-211ENST00000546202 IL16Q14005 1332 aa21.32■■□□□ 1
PPP1CA-211ENST00000546202 CALD1Q05682 793 aaKnown RBP21.31■■□□□ 1
PPP1CA-211ENST00000546202 PDE3BQ13370 1112 aa21.31■■□□□ 1
PPP1CA-211ENST00000546202 GOLGA2Q08379 1002 aa21.3■■□□□ 1
PPP1CA-211ENST00000546202 BCL9O00512 1426 aa21.29■■□□□ 1
PPP1CA-211ENST00000546202 SBF2Q86WG5 1849 aa21.29■■□□□ 1
PPP1CA-211ENST00000546202 ERVV-2B6SEH9 535 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms