RNA–Protein interactions for RNA: ENST00000545605.1

SCNN1A-223, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 4

Gene SCNN1A, Length 575 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-223ENST00000545605 USHBP1Q8N6Y0 703 aa15.15■□□□□ 0.02
SCNN1A-223ENST00000545605 CDCA7LQ96GN5 454 aa15.15■□□□□ 0.02
SCNN1A-223ENST00000545605 TOGARAM1Q9Y4F4 1720 aa15.14■□□□□ 0.01
SCNN1A-223ENST00000545605 DISP2A7MBM2 1401 aa15.14■□□□□ 0.01
SCNN1A-223ENST00000545605 SPATA31A6Q5VVP1 1343 aa15.14■□□□□ 0.01
SCNN1A-223ENST00000545605 MYH16Q9H6N6 1097 aa15.13■□□□□ 0.01
SCNN1A-223ENST00000545605 CSB-PGBD3P0DP91 1061 aa15.12■□□□□ 0.01
SCNN1A-223ENST00000545605 LAMB4A4D0S4 1761 aa15.11■□□□□ 0.01
SCNN1A-223ENST00000545605 HTATSF1O43719 755 aaKnown RBP15.11■□□□□ 0.01
SCNN1A-223ENST00000545605 MTHFSDQ2M296 383 aaKnown RBP15.11■□□□□ 0.01
SCNN1A-223ENST00000545605 AMOTQ4VCS5 1084 aa15.11■□□□□ 0.01
SCNN1A-223ENST00000545605 SPINK5Q9NQ38 1064 aaPredicted RBP15.11■□□□□ 0.01
SCNN1A-223ENST00000545605 FANCIQ9NVI1 1328 aa15.11■□□□□ 0.01
SCNN1A-223ENST00000545605 UBR2Q8IWV8 1755 aa15.11■□□□□ 0.01
SCNN1A-223ENST00000545605 CEMIPQ8WUJ3 1361 aa15.11■□□□□ 0.01
SCNN1A-223ENST00000545605 THSD7AQ9UPZ6 1657 aa15.1■□□□□ 0.01
SCNN1A-223ENST00000545605 IFT57Q9NWB7 429 aa15.1■□□□□ 0.01
SCNN1A-223ENST00000545605 NLRP2Q9NX02 1062 aa15.1■□□□□ 0.01
SCNN1A-223ENST00000545605 RNF123Q5XPI4 1314 aa15.1■□□□□ 0.01
SCNN1A-223ENST00000545605 TNS2Q63HR2 1409 aa15.09■□□□□ 0.01
SCNN1A-223ENST00000545605 DOT1LQ8TEK3 1739 aa15.09■□□□□ 0.01
SCNN1A-223ENST00000545605 RAPGEF4Q8WZA2 1011 aa15.09■□□□□ 0.01
SCNN1A-223ENST00000545605 CARD10Q9BWT7 1032 aa15.09■□□□□ 0.01
SCNN1A-223ENST00000545605 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.09■□□□□ 0.01
SCNN1A-223ENST00000545605 N4BP2Q86UW6 1770 aaPredicted RBP15.08■□□□□ 0.01
SCNN1A-223ENST00000545605 FAM83GA6ND36 823 aa15.08■□□□□ 0
SCNN1A-223ENST00000545605 PLEKHO1Q53GL0 409 aaPredicted RBP15.08■□□□□ 0
SCNN1A-223ENST00000545605 CACNA1FO60840 1977 aa15.07■□□□□ 0
SCNN1A-223ENST00000545605 GLI3P10071 1580 aa15.07■□□□□ 0
SCNN1A-223ENST00000545605 GNAT3A8MTJ3 354 aa15.07■□□□□ 0
SCNN1A-223ENST00000545605 CT47B1P0C2W7 299 aaPredicted RBP15.07■□□□□ 0
SCNN1A-223ENST00000545605 TATP17735 454 aaPredicted RBP15.07■□□□□ 0
SCNN1A-223ENST00000545605 GNAI1P63096 354 aa15.07■□□□□ 0
SCNN1A-223ENST00000545605 TOM1L2Q6ZVM7 507 aa15.07■□□□□ 0
SCNN1A-223ENST00000545605 BTG4Q9NY30 223 aa15.07■□□□□ 0
SCNN1A-223ENST00000545605 RCAN3Q9UKA8 241 aa15.07■□□□□ 0
SCNN1A-223ENST00000545605 ITGB4P16144 1822 aa15.07■□□□□ 0
SCNN1A-223ENST00000545605 KDM6AO15550 1401 aaPredicted RBP15.07■□□□□ 0
SCNN1A-223ENST00000545605 ZNF853P0CG23 659 aa15.06■□□□□ 0
SCNN1A-223ENST00000545605 AKAP4Q5JQC9 854 aa15.06■□□□□ 0
SCNN1A-223ENST00000545605 ZNF530Q6P9A1 599 aaPredicted RBP15.06■□□□□ 0
SCNN1A-223ENST00000545605 RTF1Q92541 710 aaKnown RBP15.06■□□□□ 0
SCNN1A-223ENST00000545605 C5P01031 1676 aa15.06■□□□□ 0
SCNN1A-223ENST00000545605 CFAP44Q96MT7 982 aa15.05■□□□□ -0
SCNN1A-223ENST00000545605 THUMPD2Q9BTF0 503 aaKnown RBP15.05■□□□□ -0
SCNN1A-223ENST00000545605 PCDH11XQ9BZA7 1347 aa15.04■□□□□ -0
SCNN1A-223ENST00000545605 PCDH11YQ9BZA8 1340 aa15.04■□□□□ -0
SCNN1A-223ENST00000545605 NEFLP07196 543 aa15.04■□□□□ -0
SCNN1A-223ENST00000545605 C1orf141Q5JVX7 400 aa15.04■□□□□ -0
SCNN1A-223ENST00000545605 LARP1Q6PKG0 1096 aaKnown RBP15.04■□□□□ -0
SCNN1A-223ENST00000545605 STRN4Q9NRL3 753 aa15.04■□□□□ -0
SCNN1A-223ENST00000545605 SPG7Q9UQ90 795 aa15.04■□□□□ -0
SCNN1A-223ENST00000545605 BCL9LQ86UU0 1499 aa15.03■□□□□ -0
SCNN1A-223ENST00000545605 HSPA1LP34931 641 aa15.03■□□□□ -0
SCNN1A-223ENST00000545605 MCM10Q7L590 875 aa15.03■□□□□ -0
SCNN1A-223ENST00000545605 TSR2Q969E8 191 aaKnown RBP15.03■□□□□ -0
SCNN1A-223ENST00000545605 CICQ96RK0 1608 aaPredicted RBP15.03■□□□□ -0
SCNN1A-223ENST00000545605 ADAMTS2O95450 1211 aa15.02■□□□□ -0
SCNN1A-223ENST00000545605 IL2RBP14784 551 aa15.02■□□□□ -0
SCNN1A-223ENST00000545605 EVA1CP58658 441 aa15.02■□□□□ -0
SCNN1A-223ENST00000545605 DCTN1Q14203 1278 aa15.02■□□□□ -0
SCNN1A-223ENST00000545605 SUPT16HQ9Y5B9 1047 aaKnown RBP15.02■□□□□ -0
SCNN1A-223ENST00000545605 RRP1P56182 461 aaKnown RBP15.01□□□□□ -0.01
SCNN1A-223ENST00000545605 MBIPQ9NS73 344 aa15.01□□□□□ -0.01
SCNN1A-223ENST00000545605 BABAM1Q9NWV8 329 aa15.01□□□□□ -0.01
SCNN1A-223ENST00000545605 NUTM2BA6NNL0 878 aaPredicted RBP15□□□□□ -0.01
SCNN1A-223ENST00000545605 NUTM2EB1AL46 878 aaPredicted RBP15□□□□□ -0.01
SCNN1A-223ENST00000545605 PHKG2P15735 406 aa15□□□□□ -0.01
SCNN1A-223ENST00000545605 NUTM2AQ8IVF1 878 aaPredicted RBP15□□□□□ -0.01
SCNN1A-223ENST00000545605 ZNF428Q96B54 188 aa15□□□□□ -0.01
SCNN1A-223ENST00000545605 THRAP3Q9Y2W1 955 aaKnown RBP15□□□□□ -0.01
SCNN1A-223ENST00000545605 SPATA31A1Q5TZJ5 1347 aa14.99□□□□□ -0.01
SCNN1A-223ENST00000545605 CHL1O00533 1208 aa14.99□□□□□ -0.01
SCNN1A-223ENST00000545605 HSP90AB1P08238 724 aaKnown RBP14.99□□□□□ -0.01
SCNN1A-223ENST00000545605 GTF3C3Q9Y5Q9 886 aa14.99□□□□□ -0.01
SCNN1A-223ENST00000545605 SOS1Q07889 1333 aaPredicted RBP14.98□□□□□ -0.01
SCNN1A-223ENST00000545605 SPATA31A5Q5VU36 1347 aa14.98□□□□□ -0.01
SCNN1A-223ENST00000545605 SPATA31A7Q8IWB4 1347 aa14.98□□□□□ -0.01
SCNN1A-223ENST00000545605 EXOSC9Q06265 439 aaKnown RBP14.98□□□□□ -0.01
SCNN1A-223ENST00000545605 IFNL2Q8IZJ0 200 aa14.98□□□□□ -0.01
SCNN1A-223ENST00000545605 IL17REQ8NFR9 667 aa14.98□□□□□ -0.01
SCNN1A-223ENST00000545605 CDCA7Q9BWT1 371 aaPredicted RBP14.98□□□□□ -0.01
SCNN1A-223ENST00000545605 NHSQ6T4R5 1651 aa14.97□□□□□ -0.01
SCNN1A-223ENST00000545605 RNMTO43148 476 aaKnown RBP14.97□□□□□ -0.01
SCNN1A-223ENST00000545605 FNBP4Q8N3X1 1017 aaPredicted RBP14.97□□□□□ -0.01
SCNN1A-223ENST00000545605 ATRNO75882 1429 aa14.97□□□□□ -0.01
SCNN1A-223ENST00000545605 CYP27B1O15528 508 aa14.96□□□□□ -0.01
SCNN1A-223ENST00000545605 TEFQ10587 303 aa14.96□□□□□ -0.01
SCNN1A-223ENST00000545605 UNC5CLQ8IV45 518 aa14.96□□□□□ -0.01
SCNN1A-223ENST00000545605 ZCRB1Q8TBF4 217 aaKnown RBP14.96□□□□□ -0.01
SCNN1A-223ENST00000545605 DCAF5Q96JK2 942 aa14.96□□□□□ -0.01
SCNN1A-223ENST00000545605 TSPYL4Q9UJ04 414 aa14.96□□□□□ -0.01
SCNN1A-223ENST00000545605 LAS1LQ9Y4W2 734 aaKnown RBP14.96□□□□□ -0.01
SCNN1A-223ENST00000545605 KIF16BQ96L93 1317 aa14.95□□□□□ -0.02
SCNN1A-223ENST00000545605 RARSP54136 660 aaKnown RBP14.95□□□□□ -0.02
SCNN1A-223ENST00000545605 BARGINQ6ZT62 677 aa14.95□□□□□ -0.02
SCNN1A-223ENST00000545605 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.95□□□□□ -0.02
SCNN1A-223ENST00000545605 C8orf37Q96NL8 207 aa14.95□□□□□ -0.02
SCNN1A-223ENST00000545605 KCPQ6ZWJ8 1503 aa14.95□□□□□ -0.02
SCNN1A-223ENST00000545605 ZNF831Q5JPB2 1677 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms