RNA–Protein interactions for RNA: ENST00000545224.5

SRRM4-203, Transcript of serine/arginine repetitive matrix 4, humanhuman

TSL 4

Gene SRRM4, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-203ENST00000545224 THSD7AQ9UPZ6 1657 aa15.22■□□□□ 0.03
SRRM4-203ENST00000545224 SULT6B1Q6IMI4 303 aa15.22■□□□□ 0.03
SRRM4-203ENST00000545224 FAM196AQ6ZSG2 479 aa15.22■□□□□ 0.03
SRRM4-203ENST00000545224 TNS1Q9HBL0 1735 aaKnown RBP15.22■□□□□ 0.03
SRRM4-203ENST00000545224 MEGF6O75095 1541 aa15.22■□□□□ 0.03
SRRM4-203ENST00000545224 WNK3Q9BYP7 1800 aa15.22■□□□□ 0.03
SRRM4-203ENST00000545224 EZH2Q15910 746 aaKnown RBP15.21■□□□□ 0.03
SRRM4-203ENST00000545224 FAM182BQ5T319 152 aa15.21■□□□□ 0.03
SRRM4-203ENST00000545224 RSPH6AQ9H0K4 717 aa15.21■□□□□ 0.03
SRRM4-203ENST00000545224 NUDCQ9Y266 331 aa15.21■□□□□ 0.03
SRRM4-203ENST00000545224 U2SURPO15042 1029 aaKnown RBP15.2■□□□□ 0.02
SRRM4-203ENST00000545224 HMOX1P09601 288 aa15.2■□□□□ 0.02
SRRM4-203ENST00000545224 CAMKK2Q96RR4 588 aa15.2■□□□□ 0.02
SRRM4-203ENST00000545224 PLEKHF1Q96S99 279 aa15.2■□□□□ 0.02
SRRM4-203ENST00000545224 MRS2Q9HD23 443 aa15.2■□□□□ 0.02
SRRM4-203ENST00000545224 FCHSD2O94868 740 aa15.19■□□□□ 0.02
SRRM4-203ENST00000545224 IL2RBP14784 551 aa15.19■□□□□ 0.02
SRRM4-203ENST00000545224 CDCA7Q9BWT1 371 aaPredicted RBP15.19■□□□□ 0.02
SRRM4-203ENST00000545224 ADAMTS8Q9UP79 889 aa15.19■□□□□ 0.02
SRRM4-203ENST00000545224 PLEKHG2Q9H7P9 1386 aa15.19■□□□□ 0.02
SRRM4-203ENST00000545224 OVOS2A0A0G2JMS6 1433 aa15.18■□□□□ 0.02
SRRM4-203ENST00000545224 PARP4Q9UKK3 1724 aaKnown RBP15.18■□□□□ 0.02
SRRM4-203ENST00000545224 U2AF1L5P0DN76 240 aaPredicted RBP15.18■□□□□ 0.02
SRRM4-203ENST00000545224 U2AF1Q01081 240 aaKnown RBP eCLIP15.18■□□□□ 0.02
SRRM4-203ENST00000545224 TRIM37O94972 964 aa15.17■□□□□ 0.02
SRRM4-203ENST00000545224 APBA3O96018 575 aa15.17■□□□□ 0.02
SRRM4-203ENST00000545224 NBPF14Q5TI25 921 aa15.16■□□□□ 0.02
SRRM4-203ENST00000545224 PHACTR3Q96KR7 559 aa15.16■□□□□ 0.02
SRRM4-203ENST00000545224 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.16■□□□□ 0.02
SRRM4-203ENST00000545224 SHANK3Q9BYB0 1731 aa15.16■□□□□ 0.02
SRRM4-203ENST00000545224 PKD1L3Q7Z443 1732 aa15.15■□□□□ 0.02
SRRM4-203ENST00000545224 LRRC37A3O60309 1634 aa15.15■□□□□ 0.02
SRRM4-203ENST00000545224 DCAF8L1A6NGE4 600 aa15.15■□□□□ 0.02
SRRM4-203ENST00000545224 TATP17735 454 aaPredicted RBP15.15■□□□□ 0.02
SRRM4-203ENST00000545224 YY1P25490 414 aa15.15■□□□□ 0.02
SRRM4-203ENST00000545224 PRKAR2BP31323 418 aa15.15■□□□□ 0.02
SRRM4-203ENST00000545224 RAPGEF4Q8WZA2 1011 aa15.15■□□□□ 0.02
SRRM4-203ENST00000545224 PDE3BQ13370 1112 aa15.14■□□□□ 0.01
SRRM4-203ENST00000545224 ZCRB1Q8TBF4 217 aaKnown RBP15.14■□□□□ 0.01
SRRM4-203ENST00000545224 EXOC5O00471 708 aa15.13■□□□□ 0.01
SRRM4-203ENST00000545224 CYP27B1O15528 508 aa15.13■□□□□ 0.01
SRRM4-203ENST00000545224 DDB1Q16531 1140 aa15.13■□□□□ 0.01
SRRM4-203ENST00000545224 MTHFSDQ2M296 383 aaKnown RBP15.13■□□□□ 0.01
SRRM4-203ENST00000545224 TNS2Q63HR2 1409 aa15.13■□□□□ 0.01
SRRM4-203ENST00000545224 MARCH10Q8NA82 808 aaPredicted RBP15.13■□□□□ 0.01
SRRM4-203ENST00000545224 WDR43Q15061 677 aaKnown RBP eCLIP15.12■□□□□ 0.01
SRRM4-203ENST00000545224 RREB1Q92766 1687 aa15.12■□□□□ 0.01
SRRM4-203ENST00000545224 AMOTQ4VCS5 1084 aa15.11■□□□□ 0.01
SRRM4-203ENST00000545224 PLEKHO1Q53GL0 409 aaPredicted RBP15.11■□□□□ 0.01
SRRM4-203ENST00000545224 NUP188Q5SRE5 1749 aa15.1■□□□□ 0.01
SRRM4-203ENST00000545224 NKX1-1Q15270 411 aaPredicted RBP15.1■□□□□ 0.01
SRRM4-203ENST00000545224 RUNDC1Q96C34 613 aa15.1■□□□□ 0.01
SRRM4-203ENST00000545224 SPON1Q9HCB6 807 aa15.1■□□□□ 0.01
SRRM4-203ENST00000545224 BCL9O00512 1426 aa15.09■□□□□ 0.01
SRRM4-203ENST00000545224 PHKG2P15735 406 aa15.09■□□□□ 0.01
SRRM4-203ENST00000545224 CCDC146Q8IYE0 955 aa15.09■□□□□ 0.01
SRRM4-203ENST00000545224 FAM9BQ8IZU0 186 aa15.09■□□□□ 0.01
SRRM4-203ENST00000545224 PPP1R1BQ9UD71 204 aaPredicted RBP15.09■□□□□ 0.01
SRRM4-203ENST00000545224 SPG7Q9UQ90 795 aa15.09■□□□□ 0.01
SRRM4-203ENST00000545224 KCNQ2O43526 872 aa15.08■□□□□ 0
SRRM4-203ENST00000545224 PNNQ9H307 717 aaKnown RBP15.08■□□□□ 0
SRRM4-203ENST00000545224 PCDH11XQ9BZA7 1347 aa15.08■□□□□ 0
SRRM4-203ENST00000545224 PCDH11YQ9BZA8 1340 aa15.08■□□□□ 0
SRRM4-203ENST00000545224 IFNL2Q8IZJ0 200 aa15.07■□□□□ 0
SRRM4-203ENST00000545224 DDX54Q8TDD1 881 aaKnown RBP15.07■□□□□ 0
SRRM4-203ENST00000545224 ADAMTS7Q9UKP4 1686 aa15.06■□□□□ 0
SRRM4-203ENST00000545224 TMPOP42166 694 aaKnown RBP15.06■□□□□ 0
SRRM4-203ENST00000545224 NFE2L2Q16236 605 aa15.06■□□□□ 0
SRRM4-203ENST00000545224 AKAP4Q5JQC9 854 aa15.06■□□□□ 0
SRRM4-203ENST00000545224 ZNF530Q6P9A1 599 aaPredicted RBP15.06■□□□□ 0
SRRM4-203ENST00000545224 GAS2L2Q8NHY3 880 aa15.06■□□□□ 0
SRRM4-203ENST00000545224 SBF2Q86WG5 1849 aa15.06■□□□□ 0
SRRM4-203ENST00000545224 KDM6AO15550 1401 aaPredicted RBP15.05■□□□□ -0
SRRM4-203ENST00000545224 APAF1O14727 1248 aa15.04■□□□□ -0
SRRM4-203ENST00000545224 NCBP3Q53F19 620 aaKnown RBP15.04■□□□□ -0
SRRM4-203ENST00000545224 IL17REQ8NFR9 667 aa15.04■□□□□ -0
SRRM4-203ENST00000545224 CHD4Q14839 1912 aa15.04■□□□□ -0
SRRM4-203ENST00000545224 DLG5Q8TDM6 1919 aa15.04■□□□□ -0
SRRM4-203ENST00000545224 LGR6Q9HBX8 967 aa15.03■□□□□ -0
SRRM4-203ENST00000545224 TRIM35Q9UPQ4 493 aa15.03■□□□□ -0
SRRM4-203ENST00000545224 TOGARAM1Q9Y4F4 1720 aa15.03■□□□□ -0
SRRM4-203ENST00000545224 CEMIPQ8WUJ3 1361 aa15.02■□□□□ -0
SRRM4-203ENST00000545224 MAP3K5Q99683 1374 aa15.02■□□□□ -0
SRRM4-203ENST00000545224 MAPK8IP3Q9UPT6 1336 aa15.02■□□□□ -0
SRRM4-203ENST00000545224 GNAT3A8MTJ3 354 aa15.02■□□□□ -0
SRRM4-203ENST00000545224 PLSCR1O15162 318 aa15.02■□□□□ -0
SRRM4-203ENST00000545224 RNMTO43148 476 aaKnown RBP15.02■□□□□ -0
SRRM4-203ENST00000545224 HTATSF1O43719 755 aaKnown RBP15.02■□□□□ -0
SRRM4-203ENST00000545224 MPRIPQ6WCQ1 1025 aa15.02■□□□□ -0
SRRM4-203ENST00000545224 RGPD3A6NKT7 1758 aaPredicted RBP15.01□□□□□ -0.01
SRRM4-203ENST00000545224 RGPD4Q7Z3J3 1758 aa15.01□□□□□ -0.01
SRRM4-203ENST00000545224 KAT6BQ8WYB5 2073 aa15.01□□□□□ -0.01
SRRM4-203ENST00000545224 RIPK4P57078 832 aa15.01□□□□□ -0.01
SRRM4-203ENST00000545224 C1orf141Q5JVX7 400 aa15.01□□□□□ -0.01
SRRM4-203ENST00000545224 PTF1AQ7RTS3 328 aa15.01□□□□□ -0.01
SRRM4-203ENST00000545224 DCAF5Q96JK2 942 aa15.01□□□□□ -0.01
SRRM4-203ENST00000545224 RRP7AQ9Y3A4 280 aaKnown RBP15.01□□□□□ -0.01
SRRM4-203ENST00000545224 SCN11AQ9UI33 1791 aa15.01□□□□□ -0.01
SRRM4-203ENST00000545224 HSP90AB1P08238 724 aaKnown RBP15□□□□□ -0.01
SRRM4-203ENST00000545224 ERVV-2B6SEH9 535 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms