RNA–Protein interactions for RNA: ENST00000545021.2

LYSMD4-210, Transcript of LysM domain containing 4, humanhuman

TSL 4 BASIC

Gene LYSMD4, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-210ENST00000545021 ADGRF5Q8IZF2 1346 aa23.62■■□□□ 1.37
LYSMD4-210ENST00000545021 KIF16BQ96L93 1317 aa23.62■■□□□ 1.37
LYSMD4-210ENST00000545021 CDC42BPGQ6DT37 1551 aa23.62■■□□□ 1.37
LYSMD4-210ENST00000545021 DNTTIP2Q5QJE6 756 aaKnown RBP23.61■■□□□ 1.37
LYSMD4-210ENST00000545021 FTSJ3Q8IY81 847 aaKnown RBP23.61■■□□□ 1.37
LYSMD4-210ENST00000545021 KIF3AQ9Y496 699 aa23.61■■□□□ 1.37
LYSMD4-210ENST00000545021 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.61■■□□□ 1.37
LYSMD4-210ENST00000545021 ABCC11Q96J66 1382 aa23.61■■□□□ 1.37
LYSMD4-210ENST00000545021 BMP2KLQ5H9B9 411 aa23.61■■□□□ 1.37
LYSMD4-210ENST00000545021 POLR3AO14802 1390 aaPredicted RBP23.6■■□□□ 1.37
LYSMD4-210ENST00000545021 CADPS2Q86UW7 1296 aa23.6■■□□□ 1.37
LYSMD4-210ENST00000545021 TAF7LQ5H9L4 462 aa23.59■■□□□ 1.37
LYSMD4-210ENST00000545021 PIBF1Q8WXW3 757 aa23.59■■□□□ 1.37
LYSMD4-210ENST00000545021 JARID2Q92833 1246 aaPredicted RBP23.59■■□□□ 1.37
LYSMD4-210ENST00000545021 NUCB1Q02818 461 aa23.59■■□□□ 1.37
LYSMD4-210ENST00000545021 GPT2Q8TD30 523 aa23.59■■□□□ 1.37
LYSMD4-210ENST00000545021 TSC1Q92574 1164 aa23.59■■□□□ 1.37
LYSMD4-210ENST00000545021 C14orf93Q9H972 538 aaKnown RBP23.58■■□□□ 1.37
LYSMD4-210ENST00000545021 PTMAP06454 111 aaKnown RBP23.58■■□□□ 1.36
LYSMD4-210ENST00000545021 DDX19BQ9UMR2 479 aa23.58■■□□□ 1.36
LYSMD4-210ENST00000545021 AK9Q5TCS8 1911 aa23.57■■□□□ 1.36
LYSMD4-210ENST00000545021 NHSL1Q5SYE7 1610 aa23.57■■□□□ 1.36
LYSMD4-210ENST00000545021 ADGRB1O14514 1584 aa23.57■■□□□ 1.36
LYSMD4-210ENST00000545021 PDCL2Q8N4E4 241 aa23.56■■□□□ 1.36
LYSMD4-210ENST00000545021 RBM42Q9BTD8 480 aaKnown RBP23.56■■□□□ 1.36
LYSMD4-210ENST00000545021 RBM27Q9P2N5 1060 aaKnown RBP23.56■■□□□ 1.36
LYSMD4-210ENST00000545021 MST1RQ04912 1400 aa23.56■■□□□ 1.36
LYSMD4-210ENST00000545021 ROBO2Q9HCK4 1378 aa23.56■■□□□ 1.36
LYSMD4-210ENST00000545021 HSPA1LP34931 641 aa23.55■■□□□ 1.36
LYSMD4-210ENST00000545021 PHLPP1O60346 1717 aa23.55■■□□□ 1.36
LYSMD4-210ENST00000545021 PIP4K2BP78356 416 aa23.55■■□□□ 1.36
LYSMD4-210ENST00000545021 BCL2L12Q9HB09 334 aa23.55■■□□□ 1.36
LYSMD4-210ENST00000545021 YTHDC2Q9H6S0 1430 aaKnown RBP23.55■■□□□ 1.36
LYSMD4-210ENST00000545021 RUNDC1Q96C34 613 aa23.54■■□□□ 1.36
LYSMD4-210ENST00000545021 TMEM63CQ9P1W3 806 aa23.54■■□□□ 1.36
LYSMD4-210ENST00000545021 COL16A1Q07092 1604 aaPredicted RBP23.54■■□□□ 1.36
LYSMD4-210ENST00000545021 NOLC1Q14978 699 aaKnown RBP eCLIP23.54■■□□□ 1.36
LYSMD4-210ENST00000545021 CCDC27Q2M243 656 aa23.54■■□□□ 1.36
LYSMD4-210ENST00000545021 SYCE3A1L190 88 aa23.53■■□□□ 1.36
LYSMD4-210ENST00000545021 SLAIN2Q9P270 581 aa23.53■■□□□ 1.36
LYSMD4-210ENST00000545021 SHPRHQ149N8 1683 aa23.53■■□□□ 1.36
LYSMD4-210ENST00000545021 PRPF40AO75400 957 aaKnown RBP23.53■■□□□ 1.36
LYSMD4-210ENST00000545021 CT47B1P0C2W7 299 aaPredicted RBP23.53■■□□□ 1.36
LYSMD4-210ENST00000545021 ADGRB2O60241 1585 aa23.52■■□□□ 1.36
LYSMD4-210ENST00000545021 FEZ1Q99689 392 aa23.52■■□□□ 1.36
LYSMD4-210ENST00000545021 CWC22Q9HCG8 908 aaKnown RBP23.52■■□□□ 1.36
LYSMD4-210ENST00000545021 MED1Q15648 1581 aaPredicted RBP23.52■■□□□ 1.36
LYSMD4-210ENST00000545021 ATF3P18847 181 aa23.51■■□□□ 1.35
LYSMD4-210ENST00000545021 FKBP5Q13451 457 aaPredicted RBP23.51■■□□□ 1.35
LYSMD4-210ENST00000545021 SPTLC3Q9NUV7 552 aa23.51■■□□□ 1.35
LYSMD4-210ENST00000545021 CHD1LQ86WJ1 897 aa23.51■■□□□ 1.35
LYSMD4-210ENST00000545021 CGNQ9P2M7 1197 aaKnown RBP23.51■■□□□ 1.35
LYSMD4-210ENST00000545021 SPDYE4A6NLX3 237 aa23.5■■□□□ 1.35
LYSMD4-210ENST00000545021 ANKRD7Q92527 254 aa23.5■■□□□ 1.35
LYSMD4-210ENST00000545021 ZNF830Q96NB3 372 aaPredicted RBP23.5■■□□□ 1.35
LYSMD4-210ENST00000545021 RABEP1Q15276 862 aa23.5■■□□□ 1.35
LYSMD4-210ENST00000545021 NCBP3Q53F19 620 aaKnown RBP23.5■■□□□ 1.35
LYSMD4-210ENST00000545021 TCP11L2Q8N4U5 519 aa23.5■■□□□ 1.35
LYSMD4-210ENST00000545021 FMN2Q9NZ56 1722 aa23.5■■□□□ 1.35
LYSMD4-210ENST00000545021 MBD3O95983 291 aa23.49■■□□□ 1.35
LYSMD4-210ENST00000545021 TBC1D9Q6ZT07 1266 aa23.49■■□□□ 1.35
LYSMD4-210ENST00000545021 NEUROD2Q15784 382 aa23.49■■□□□ 1.35
LYSMD4-210ENST00000545021 LNPKQ9C0E8 428 aa23.49■■□□□ 1.35
LYSMD4-210ENST00000545021 RRP7AQ9Y3A4 280 aaKnown RBP23.48■■□□□ 1.35
LYSMD4-210ENST00000545021 TRIM27P14373 513 aa23.48■■□□□ 1.35
LYSMD4-210ENST00000545021 ITPRIPQ8IWB1 547 aa23.48■■□□□ 1.35
LYSMD4-210ENST00000545021 GABPB1Q06547 395 aaPredicted RBP23.47■■□□□ 1.35
LYSMD4-210ENST00000545021 ZNF771Q7L3S4 317 aaPredicted RBP23.47■■□□□ 1.35
LYSMD4-210ENST00000545021 RNF214Q8ND24 703 aa23.47■■□□□ 1.35
LYSMD4-210ENST00000545021 TSPY26PQ9H489 355 aa23.47■■□□□ 1.35
LYSMD4-210ENST00000545021 ZBTB40Q9NUA8 1239 aa23.47■■□□□ 1.35
LYSMD4-210ENST00000545021 CDK11BP21127 795 aaKnown RBP23.46■■□□□ 1.35
LYSMD4-210ENST00000545021 VGLL3A8MV65 326 aa23.45■■□□□ 1.35
LYSMD4-210ENST00000545021 PKP1Q13835 747 aa23.45■■□□□ 1.35
LYSMD4-210ENST00000545021 C14orf37Q86TY3 774 aa23.45■■□□□ 1.35
LYSMD4-210ENST00000545021 OGFRQ9NZT2 677 aa23.45■■□□□ 1.34
LYSMD4-210ENST00000545021 C1orf167Q5SNV9 1468 aa23.45■■□□□ 1.34
LYSMD4-210ENST00000545021 U2AF2P26368 475 aaKnown RBP eCLIP23.44■■□□□ 1.34
LYSMD4-210ENST00000545021 SENP3Q9H4L4 574 aaPredicted RBP23.44■■□□□ 1.34
LYSMD4-210ENST00000545021 KIF1AQ12756 1690 aa23.44■■□□□ 1.34
LYSMD4-210ENST00000545021 DIAPH3Q9NSV4 1193 aa23.44■■□□□ 1.34
LYSMD4-210ENST00000545021 SLC20A2Q08357 652 aa23.43■■□□□ 1.34
LYSMD4-210ENST00000545021 ATF7IPQ6VMQ6 1270 aa23.43■■□□□ 1.34
LYSMD4-210ENST00000545021 FAM177BA6PVY3 158 aa23.43■■□□□ 1.34
LYSMD4-210ENST00000545021 RBM33Q96EV2 1170 aaKnown RBP23.43■■□□□ 1.34
LYSMD4-210ENST00000545021 UVSSAQ2YD98 709 aa23.42■■□□□ 1.34
LYSMD4-210ENST00000545021 SMC4Q9NTJ3 1288 aa23.42■■□□□ 1.34
LYSMD4-210ENST00000545021 ARHGEF28Q8N1W1 1705 aaKnown RBP23.42■■□□□ 1.34
LYSMD4-210ENST00000545021 NSFL1CQ9UNZ2 370 aaKnown RBP23.42■■□□□ 1.34
LYSMD4-210ENST00000545021 CTIFO43310 598 aaKnown RBP23.41■■□□□ 1.34
LYSMD4-210ENST00000545021 ZDHHC9Q9Y397 364 aa23.41■■□□□ 1.34
LYSMD4-210ENST00000545021 ZBTB7CA1YPR0 619 aa23.41■■□□□ 1.34
LYSMD4-210ENST00000545021 FAM184AQ8NB25 1140 aa23.4■■□□□ 1.34
LYSMD4-210ENST00000545021 IGSF3O75054 1194 aa23.4■■□□□ 1.34
LYSMD4-210ENST00000545021 CDC45O75419 566 aa23.4■■□□□ 1.34
LYSMD4-210ENST00000545021 JCADQ9P266 1359 aa23.39■■□□□ 1.34
LYSMD4-210ENST00000545021 ZBTB22O15209 634 aa23.39■■□□□ 1.33
LYSMD4-210ENST00000545021 IRX5P78411 483 aaPredicted RBP23.39■■□□□ 1.33
LYSMD4-210ENST00000545021 CFAP70Q5T0N1 1121 aa23.39■■□□□ 1.33
LYSMD4-210ENST00000545021 CHAF1AQ13111 956 aaPredicted RBP23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms