RNA–Protein interactions for RNA: ENST00000544725.5

COPS7A-220, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-220ENST00000544725 MSH5O43196 834 aa20.75■□□□□ 0.91
COPS7A-220ENST00000544725 YBX3P16989 372 aaKnown RBP eCLIP20.75■□□□□ 0.91
COPS7A-220ENST00000544725 SIN3AQ96ST3 1273 aa20.75■□□□□ 0.91
COPS7A-220ENST00000544725 CCNL1Q9UK58 526 aaPredicted RBP20.75■□□□□ 0.91
COPS7A-220ENST00000544725 NEUROD1Q13562 356 aa20.73■□□□□ 0.91
COPS7A-220ENST00000544725 FAM208AQ9UK61 1670 aaKnown RBP20.73■□□□□ 0.91
COPS7A-220ENST00000544725 NSD2O96028 1365 aa20.72■□□□□ 0.91
COPS7A-220ENST00000544725 TUBGCP6Q96RT7 1819 aa20.72■□□□□ 0.91
COPS7A-220ENST00000544725 ZCRB1Q8TBF4 217 aaKnown RBP20.72■□□□□ 0.91
COPS7A-220ENST00000544725 A0A1W2PP64 1363 aa20.72■□□□□ 0.91
COPS7A-220ENST00000544725 COL23A1Q86Y22 540 aaPredicted RBP20.71■□□□□ 0.91
COPS7A-220ENST00000544725 LY75O60449 1722 aa20.7■□□□□ 0.9
COPS7A-220ENST00000544725 CARD11Q9BXL7 1154 aa20.7■□□□□ 0.9
COPS7A-220ENST00000544725 USP47Q96K76 1375 aa20.7■□□□□ 0.9
COPS7A-220ENST00000544725 DOT1LQ8TEK3 1739 aa20.7■□□□□ 0.9
COPS7A-220ENST00000544725 ATP10DQ9P241 1426 aa20.7■□□□□ 0.9
COPS7A-220ENST00000544725 HMGB2P26583 209 aaKnown RBP20.69■□□□□ 0.9
COPS7A-220ENST00000544725 HOXC9P31274 260 aa20.69■□□□□ 0.9
COPS7A-220ENST00000544725 AMPHP49418 695 aa20.69■□□□□ 0.9
COPS7A-220ENST00000544725 PUS7Q96PZ0 661 aaKnown RBP20.69■□□□□ 0.9
COPS7A-220ENST00000544725 COG3Q96JB2 828 aa20.68■□□□□ 0.9
COPS7A-220ENST00000544725 CD2APQ9Y5K6 639 aa20.68■□□□□ 0.9
COPS7A-220ENST00000544725 MAP3K19Q56UN5 1328 aa20.68■□□□□ 0.9
COPS7A-220ENST00000544725 MSL1Q68DK7 614 aa20.67■□□□□ 0.9
COPS7A-220ENST00000544725 GPBP1L1Q9HC44 474 aaPredicted RBP20.67■□□□□ 0.9
COPS7A-220ENST00000544725 FLAD1Q8NFF5 587 aa20.66■□□□□ 0.9
COPS7A-220ENST00000544725 MEGF6O75095 1541 aa20.66■□□□□ 0.9
COPS7A-220ENST00000544725 CGNL1Q0VF96 1302 aa20.65■□□□□ 0.9
COPS7A-220ENST00000544725 RAPGEF4Q8WZA2 1011 aa20.62■□□□□ 0.89
COPS7A-220ENST00000544725 RTL1A6NKG5 1358 aa20.61■□□□□ 0.89
COPS7A-220ENST00000544725 HSPA6P17066 643 aa20.61■□□□□ 0.89
COPS7A-220ENST00000544725 ADCY9O60503 1353 aa20.6■□□□□ 0.89
COPS7A-220ENST00000544725 FBLN1P23142 703 aa20.6■□□□□ 0.89
COPS7A-220ENST00000544725 NBPF6Q5VWK0 638 aa20.6■□□□□ 0.89
COPS7A-220ENST00000544725 NBPF4Q96M43 638 aa20.6■□□□□ 0.89
COPS7A-220ENST00000544725 TATP17735 454 aaPredicted RBP20.59■□□□□ 0.89
COPS7A-220ENST00000544725 SMG6Q86US8 1419 aaKnown RBP20.59■□□□□ 0.89
COPS7A-220ENST00000544725 ZNF526Q8TF50 670 aaPredicted RBP20.58■□□□□ 0.89
COPS7A-220ENST00000544725 PALLDQ8WX93 1383 aa20.58■□□□□ 0.88
COPS7A-220ENST00000544725 PCDH11XQ9BZA7 1347 aa20.57■□□□□ 0.88
COPS7A-220ENST00000544725 PCDH11YQ9BZA8 1340 aa20.57■□□□□ 0.88
COPS7A-220ENST00000544725 USHBP1Q8N6Y0 703 aa20.57■□□□□ 0.88
COPS7A-220ENST00000544725 C5P01031 1676 aa20.57■□□□□ 0.88
COPS7A-220ENST00000544725 RGPD2P0DJD1 1756 aa20.57■□□□□ 0.88
COPS7A-220ENST00000544725 AK7Q96M32 723 aa20.56■□□□□ 0.88
COPS7A-220ENST00000544725 SLC24A1O60721 1099 aa20.55■□□□□ 0.88
COPS7A-220ENST00000544725 RRS1Q15050 365 aaKnown RBP20.55■□□□□ 0.88
COPS7A-220ENST00000544725 MPRIPQ6WCQ1 1025 aa20.55■□□□□ 0.88
COPS7A-220ENST00000544725 SMARCC1Q92922 1105 aaPredicted RBP20.55■□□□□ 0.88
COPS7A-220ENST00000544725 IGSF1Q8N6C5 1336 aa20.54■□□□□ 0.88
COPS7A-220ENST00000544725 NSD3Q9BZ95 1437 aa20.53■□□□□ 0.88
COPS7A-220ENST00000544725 TESK2Q96S53 571 aa20.52■□□□□ 0.88
COPS7A-220ENST00000544725 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.5■□□□□ 0.87
COPS7A-220ENST00000544725 PHF14O94880 888 aa20.5■□□□□ 0.87
COPS7A-220ENST00000544725 GGNBP2Q9H3C7 697 aa20.5■□□□□ 0.87
COPS7A-220ENST00000544725 WWC3Q9ULE0 1092 aa20.5■□□□□ 0.87
COPS7A-220ENST00000544725 TAF1LQ8IZX4 1826 aa20.5■□□□□ 0.87
COPS7A-220ENST00000544725 C4BP0C0L5 1744 aa20.5■□□□□ 0.87
COPS7A-220ENST00000544725 INSRP06213 1382 aa20.49■□□□□ 0.87
COPS7A-220ENST00000544725 ST20-MTHFSA0A0A6YYL1 179 aa20.49■□□□□ 0.87
COPS7A-220ENST00000544725 FYB1O15117 783 aa20.49■□□□□ 0.87
COPS7A-220ENST00000544725 CYP27B1O15528 508 aa20.49■□□□□ 0.87
COPS7A-220ENST00000544725 SSFA2P28290 1259 aa20.49■□□□□ 0.87
COPS7A-220ENST00000544725 KIF3CO14782 793 aa20.48■□□□□ 0.87
COPS7A-220ENST00000544725 HSP90AB2PQ58FF8 381 aa20.48■□□□□ 0.87
COPS7A-220ENST00000544725 AMIGO3Q86WK7 504 aa20.48■□□□□ 0.87
COPS7A-220ENST00000544725 FLT4P35916 1363 aa20.47■□□□□ 0.87
COPS7A-220ENST00000544725 TONSLQ96HA7 1378 aa20.47■□□□□ 0.87
COPS7A-220ENST00000544725 KIF24Q5T7B8 1368 aa20.46■□□□□ 0.87
COPS7A-220ENST00000544725 SMIM5Q71RC9 77 aa20.45■□□□□ 0.86
COPS7A-220ENST00000544725 PIGBQ92521 554 aa20.45■□□□□ 0.86
COPS7A-220ENST00000544725 TOGARAM1Q9Y4F4 1720 aa20.44■□□□□ 0.86
COPS7A-220ENST00000544725 LOC102724428A0A0B4J2F2 783 aa20.44■□□□□ 0.86
COPS7A-220ENST00000544725 APLP1P51693 650 aa20.44■□□□□ 0.86
COPS7A-220ENST00000544725 SIK1P57059 783 aa20.44■□□□□ 0.86
COPS7A-220ENST00000544725 UBR3Q6ZT12 1888 aa20.43■□□□□ 0.86
COPS7A-220ENST00000544725 NKX1-1Q15270 411 aaPredicted RBP20.43■□□□□ 0.86
COPS7A-220ENST00000544725 LINC00116Q8NCU8 138 aa20.43■□□□□ 0.86
COPS7A-220ENST00000544725 SPG7Q9UQ90 795 aa20.42■□□□□ 0.86
COPS7A-220ENST00000544725 CICQ96RK0 1608 aaPredicted RBP20.41■□□□□ 0.86
COPS7A-220ENST00000544725 ITGB4P16144 1822 aa20.41■□□□□ 0.86
COPS7A-220ENST00000544725 GNPATO15228 680 aa20.4■□□□□ 0.86
COPS7A-220ENST00000544725 TOMM70O94826 608 aa20.4■□□□□ 0.86
COPS7A-220ENST00000544725 TMF1P82094 1093 aa20.4■□□□□ 0.86
COPS7A-220ENST00000544725 TMOD3Q9NYL9 352 aa20.4■□□□□ 0.86
COPS7A-220ENST00000544725 MMP10P09238 476 aa20.39■□□□□ 0.85
COPS7A-220ENST00000544725 PKD1L3Q7Z443 1732 aa20.39■□□□□ 0.85
COPS7A-220ENST00000544725 ATP6V1AP38606 617 aa20.38■□□□□ 0.85
COPS7A-220ENST00000544725 TGFB2P61812 414 aa20.38■□□□□ 0.85
COPS7A-220ENST00000544725 ITPK1Q13572 414 aa20.37■□□□□ 0.85
COPS7A-220ENST00000544725 BCS1LQ9Y276 419 aa20.37■□□□□ 0.85
COPS7A-220ENST00000544725 PXDNLA1KZ92 1463 aa20.37■□□□□ 0.85
COPS7A-220ENST00000544725 MAP2P11137 1827 aaKnown RBP20.37■□□□□ 0.85
COPS7A-220ENST00000544725 NCAPD2Q15021 1401 aa20.36■□□□□ 0.85
COPS7A-220ENST00000544725 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.36■□□□□ 0.85
COPS7A-220ENST00000544725 ASAP1Q9ULH1 1129 aa20.36■□□□□ 0.85
COPS7A-220ENST00000544725 EMILIN1Q9Y6C2 1016 aa20.36■□□□□ 0.85
COPS7A-220ENST00000544725 CDCA8Q53HL2 280 aa20.35■□□□□ 0.85
COPS7A-220ENST00000544725 NLGN1Q8N2Q7 840 aa20.35■□□□□ 0.85
COPS7A-220ENST00000544725 IFNL2Q8IZJ0 200 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms