RNA–Protein interactions for RNA: ENST00000544131.1

CCDC170-203, Transcript of coiled-coil domain containing 170, humanhuman

TSL 4

Gene CCDC170, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-203ENST00000544131 PCDHB9Q9Y5E1 797 aa7.82□□□□□ -1.16
CCDC170-203ENST00000544131 DNMT3AQ9Y6K1 912 aaPredicted RBP7.82□□□□□ -1.16
CCDC170-203ENST00000544131 NDUFB9Q9Y6M9 179 aa7.82□□□□□ -1.16
CCDC170-203ENST00000544131 ADH1AP07327 375 aa7.81□□□□□ -1.16
CCDC170-203ENST00000544131 GPAT2Q6NUI2 795 aa7.81□□□□□ -1.16
CCDC170-203ENST00000544131 APBB1O00213 710 aa7.8□□□□□ -1.16
CCDC170-203ENST00000544131 MARSP56192 900 aaKnown RBP7.8□□□□□ -1.16
CCDC170-203ENST00000544131 ERVH48-1M5A8F1 160 aa7.79□□□□□ -1.16
CCDC170-203ENST00000544131 LILRA1O75019 489 aa7.79□□□□□ -1.16
CCDC170-203ENST00000544131 ADD1P35611 737 aaKnown RBP7.79□□□□□ -1.16
CCDC170-203ENST00000544131 GAS6Q14393 721 aa7.79□□□□□ -1.16
CCDC170-203ENST00000544131 KANK3Q6NY19 840 aa7.79□□□□□ -1.16
CCDC170-203ENST00000544131 KDF1Q8NAX2 398 aaPredicted RBP7.79□□□□□ -1.16
CCDC170-203ENST00000544131 CUEDC1Q9NWM3 386 aaPredicted RBP7.79□□□□□ -1.16
CCDC170-203ENST00000544131 PTGIRP43119 386 aa7.78□□□□□ -1.16
CCDC170-203ENST00000544131 SRSF11Q05519 484 aaKnown RBP7.78□□□□□ -1.16
CCDC170-203ENST00000544131 NR1H3Q13133 447 aa7.78□□□□□ -1.16
CCDC170-203ENST00000544131 LYPD4Q6UWN0 246 aa7.78□□□□□ -1.16
CCDC170-203ENST00000544131 SCARF2Q96GP6 870 aaPredicted RBP7.78□□□□□ -1.16
CCDC170-203ENST00000544131 TBC1D2BQ9UPU7 963 aa7.78□□□□□ -1.16
CCDC170-203ENST00000544131 SOCS7O14512 581 aa7.77□□□□□ -1.17
CCDC170-203ENST00000544131 GPR37L1O60883 481 aa7.77□□□□□ -1.17
CCDC170-203ENST00000544131 GIGYF1O75420 1035 aaPredicted RBP7.77□□□□□ -1.17
CCDC170-203ENST00000544131 LYSMD3Q7Z3D4 306 aa7.77□□□□□ -1.17
CCDC170-203ENST00000544131 PRM3Q9NNZ6 103 aa7.77□□□□□ -1.17
CCDC170-203ENST00000544131 ESPNB1AK53 854 aa7.76□□□□□ -1.17
CCDC170-203ENST00000544131 IGHA1P01876 353 aa7.76□□□□□ -1.17
CCDC170-203ENST00000544131 MAP3K10Q02779 954 aa7.76□□□□□ -1.17
CCDC170-203ENST00000544131 ZNF330Q9Y3S2 320 aaPredicted RBP7.76□□□□□ -1.17
CCDC170-203ENST00000544131 CELA2BP08218 269 aaPredicted RBP7.75□□□□□ -1.17
CCDC170-203ENST00000544131 RHOQP17081 205 aa7.74□□□□□ -1.17
CCDC170-203ENST00000544131 FOXK2Q01167 660 aa7.74□□□□□ -1.17
CCDC170-203ENST00000544131 PRICKLE2Q7Z3G6 844 aa7.74□□□□□ -1.17
CCDC170-203ENST00000544131 ZNF837Q96EG3 531 aaPredicted RBP7.74□□□□□ -1.17
CCDC170-203ENST00000544131 CYLDQ9NQC7 956 aa7.74□□□□□ -1.17
CCDC170-203ENST00000544131 GDPD2Q9HCC8 539 aa7.73□□□□□ -1.17
CCDC170-203ENST00000544131 ABL2P42684 1182 aa7.72□□□□□ -1.17
CCDC170-203ENST00000544131 RNF144AP50876 292 aaPredicted RBP7.72□□□□□ -1.17
CCDC170-203ENST00000544131 MCCD1P59942 119 aaPredicted RBP7.72□□□□□ -1.17
CCDC170-203ENST00000544131 SEPT12Q8IYM1 358 aa7.72□□□□□ -1.17
CCDC170-203ENST00000544131 GPR25O00155 361 aa7.71□□□□□ -1.18
CCDC170-203ENST00000544131 IRF5Q13568 498 aa7.71□□□□□ -1.18
CCDC170-203ENST00000544131 RNF20Q5VTR2 975 aa7.71□□□□□ -1.18
CCDC170-203ENST00000544131 TRIM22Q8IYM9 498 aa7.71□□□□□ -1.18
CCDC170-203ENST00000544131 MBIPQ9NS73 344 aa7.71□□□□□ -1.18
CCDC170-203ENST00000544131 MCM6Q14566 821 aa7.7□□□□□ -1.18
CCDC170-203ENST00000544131 ZNF592Q92610 1267 aa7.7□□□□□ -1.18
CCDC170-203ENST00000544131 ENAMQ9NRM1 1142 aa7.7□□□□□ -1.18
CCDC170-203ENST00000544131 ATP5J2-PTCD1G3V325 749 aa7.69□□□□□ -1.18
CCDC170-203ENST00000544131 RIPOR1Q6ZS17 1223 aa7.69□□□□□ -1.18
CCDC170-203ENST00000544131 GMCL1Q96IK5 515 aa7.69□□□□□ -1.18
CCDC170-203ENST00000544131 IGF1RP08069 1367 aa7.69□□□□□ -1.18
CCDC170-203ENST00000544131 MEN1O00255 615 aa7.68□□□□□ -1.18
CCDC170-203ENST00000544131 EIF4G2P78344 907 aaKnown RBP eCLIP7.68□□□□□ -1.18
CCDC170-203ENST00000544131 VAC14Q08AM6 782 aa7.68□□□□□ -1.18
CCDC170-203ENST00000544131 DBN1Q16643 649 aa7.68□□□□□ -1.18
CCDC170-203ENST00000544131 FOXR1Q6PIV2 292 aa7.68□□□□□ -1.18
CCDC170-203ENST00000544131 CEP126Q9P2H0 1117 aa7.68□□□□□ -1.18
CCDC170-203ENST00000544131 PCDHB11Q9Y5F2 797 aa7.68□□□□□ -1.18
CCDC170-203ENST00000544131 GPC1P35052 558 aa7.67□□□□□ -1.18
CCDC170-203ENST00000544131 PLA2G4EQ3MJ16 856 aa7.67□□□□□ -1.18
CCDC170-203ENST00000544131 GTPBP3Q969Y2 492 aaKnown RBP7.67□□□□□ -1.18
CCDC170-203ENST00000544131 TRIM52Q96A61 297 aa7.67□□□□□ -1.18
CCDC170-203ENST00000544131 DCAF5Q96JK2 942 aa7.67□□□□□ -1.18
CCDC170-203ENST00000544131 DYRK1BQ9Y463 629 aa7.67□□□□□ -1.18
CCDC170-203ENST00000544131 CNTNAP5Q8WYK1 1306 aa7.67□□□□□ -1.18
CCDC170-203ENST00000544131 A0A1W2PRU2 124 aa7.66□□□□□ -1.18
CCDC170-203ENST00000544131 PHF20L1A8MW92 1017 aa7.66□□□□□ -1.18
CCDC170-203ENST00000544131 BCRP11274 1271 aa7.66□□□□□ -1.18
CCDC170-203ENST00000544131 TMEM132AQ24JP5 1023 aa7.66□□□□□ -1.18
CCDC170-203ENST00000544131 CCDC125Q86Z20 511 aa7.66□□□□□ -1.18
CCDC170-203ENST00000544131 ACDQ96AP0 544 aa7.66□□□□□ -1.18
CCDC170-203ENST00000544131 ESF1Q9H501 851 aaKnown RBP7.66□□□□□ -1.18
CCDC170-203ENST00000544131 COG6Q9Y2V7 657 aa7.66□□□□□ -1.18
CCDC170-203ENST00000544131 MSTNO14793 375 aa7.65□□□□□ -1.18
CCDC170-203ENST00000544131 SCTRP47872 440 aa7.65□□□□□ -1.18
CCDC170-203ENST00000544131 POU4F2Q12837 409 aa7.65□□□□□ -1.18
CCDC170-203ENST00000544131 CC2D2BQ6DHV5 1058 aa7.65□□□□□ -1.18
CCDC170-203ENST00000544131 PODNQ7Z5L7 613 aa7.65□□□□□ -1.18
CCDC170-203ENST00000544131 NEDD1Q8NHV4 660 aa7.65□□□□□ -1.18
CCDC170-203ENST00000544131 GAS2L1Q99501 681 aaPredicted RBP7.65□□□□□ -1.18
CCDC170-203ENST00000544131 ITGB2P05107 769 aa7.64□□□□□ -1.19
CCDC170-203ENST00000544131 ERVK-9P63128 1117 aa7.64□□□□□ -1.19
CCDC170-203ENST00000544131 WASHC4Q2M389 1173 aa7.64□□□□□ -1.19
CCDC170-203ENST00000544131 BEND7Q8N7W2 519 aaPredicted RBP7.64□□□□□ -1.19
CCDC170-203ENST00000544131 CCDC85AQ96PX6 553 aaPredicted RBP7.64□□□□□ -1.19
CCDC170-203ENST00000544131 SPOCK3Q9BQ16 436 aa7.64□□□□□ -1.19
CCDC170-203ENST00000544131 H7C1W4 665 aa7.63□□□□□ -1.19
CCDC170-203ENST00000544131 SLFNL1Q499Z3 407 aa7.63□□□□□ -1.19
CCDC170-203ENST00000544131 SLC27A3Q5K4L6 730 aa7.63□□□□□ -1.19
CCDC170-203ENST00000544131 POM121Q96HA1 1249 aa7.63□□□□□ -1.19
CCDC170-203ENST00000544131 TRERF1Q96PN7 1200 aa7.63□□□□□ -1.19
CCDC170-203ENST00000544131 CDCA7Q9BWT1 371 aaPredicted RBP7.63□□□□□ -1.19
CCDC170-203ENST00000544131 RAD21O60216 631 aa7.62□□□□□ -1.19
CCDC170-203ENST00000544131 FLIIQ13045 1269 aa7.62□□□□□ -1.19
CCDC170-203ENST00000544131 CLN3Q13286 438 aa7.62□□□□□ -1.19
CCDC170-203ENST00000544131 TSGA10IPQ3SY00 556 aa7.62□□□□□ -1.19
CCDC170-203ENST00000544131 NBPF10Q6P3W6 841 aaKnown RBP7.62□□□□□ -1.19
CCDC170-203ENST00000544131 NBPF15Q8N660 670 aa7.62□□□□□ -1.19
CCDC170-203ENST00000544131 NLRP3Q96P20 1036 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms