RNA–Protein interactions for RNA: ENST00000543354.5

RPS6KC1-206, Transcript of ribosomal protein S6 kinase C1, humanhuman

TSL 1 (best) BASIC

Gene RPS6KC1, Length 4,082 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-206ENST00000543354 MTMR7Q9Y216 660 aa16.42■□□□□ 0.22
RPS6KC1-206ENST00000543354 CAMSAP2Q08AD1 1489 aa16.42■□□□□ 0.22
RPS6KC1-206ENST00000543354 SYNJ2O15056 1496 aa16.41■□□□□ 0.22
RPS6KC1-206ENST00000543354 CHMP4CQ96CF2 233 aa16.41■□□□□ 0.22
RPS6KC1-206ENST00000543354 SPATA31E1Q6ZUB1 1445 aa16.41■□□□□ 0.22
RPS6KC1-206ENST00000543354 PLEKHH2Q8IVE3 1493 aa16.41■□□□□ 0.22
RPS6KC1-206ENST00000543354 PPP4R3BQ5MIZ7 849 aa16.41■□□□□ 0.22
RPS6KC1-206ENST00000543354 KDM5BQ9UGL1 1544 aa16.41■□□□□ 0.22
RPS6KC1-206ENST00000543354 SDSP20132 328 aa16.4■□□□□ 0.22
RPS6KC1-206ENST00000543354 NUCB1Q02818 461 aa16.4■□□□□ 0.22
RPS6KC1-206ENST00000543354 OLFM4Q6UX06 510 aa16.4■□□□□ 0.22
RPS6KC1-206ENST00000543354 CFAP43Q8NDM7 1665 aa16.4■□□□□ 0.22
RPS6KC1-206ENST00000543354 ABCA10Q8WWZ4 1543 aa16.4■□□□□ 0.22
RPS6KC1-206ENST00000543354 GUCY1B3Q02153 619 aa16.4■□□□□ 0.22
RPS6KC1-206ENST00000543354 ALDH1L2Q3SY69 923 aa16.4■□□□□ 0.22
RPS6KC1-206ENST00000543354 CGNQ9P2M7 1197 aaKnown RBP16.4■□□□□ 0.22
RPS6KC1-206ENST00000543354 TMX3Q96JJ7 454 aa16.4■□□□□ 0.22
RPS6KC1-206ENST00000543354 TCEANC2Q96MN5 208 aa16.4■□□□□ 0.22
RPS6KC1-206ENST00000543354 HECW1Q76N89 1606 aa16.39■□□□□ 0.21
RPS6KC1-206ENST00000543354 CCDC183Q5T5S1 534 aa16.39■□□□□ 0.21
RPS6KC1-206ENST00000543354 AEBP1Q8IUX7 1158 aa16.39■□□□□ 0.21
RPS6KC1-206ENST00000543354 URB2Q14146 1524 aaKnown RBP16.39■□□□□ 0.21
RPS6KC1-206ENST00000543354 KDM6BO15054 1643 aa16.39■□□□□ 0.21
RPS6KC1-206ENST00000543354 MYL6BP14649 208 aa16.39■□□□□ 0.21
RPS6KC1-206ENST00000543354 SAFBQ15424 915 aaKnown RBP eCLIP16.39■□□□□ 0.21
RPS6KC1-206ENST00000543354 LRRFIP1Q32MZ4 808 aaKnown RBP16.39■□□□□ 0.21
RPS6KC1-206ENST00000543354 SLC26A8Q96RN1 970 aa16.39■□□□□ 0.21
RPS6KC1-206ENST00000543354 KDM2BQ8NHM5 1336 aa16.38■□□□□ 0.21
RPS6KC1-206ENST00000543354 HDAC1Q13547 482 aaPredicted RBP16.38■□□□□ 0.21
RPS6KC1-206ENST00000543354 VPS53Q5VIR6 699 aa16.38■□□□□ 0.21
RPS6KC1-206ENST00000543354 SYTL4Q96C24 671 aaPredicted RBP16.38■□□□□ 0.21
RPS6KC1-206ENST00000543354 MEIS3Q99687 375 aa16.38■□□□□ 0.21
RPS6KC1-206ENST00000543354 LRRFIP2Q9Y608 721 aaKnown RBP16.38■□□□□ 0.21
RPS6KC1-206ENST00000543354 FYB1O15117 783 aa16.38■□□□□ 0.21
RPS6KC1-206ENST00000543354 RRP12Q5JTH9 1297 aaKnown RBP16.38■□□□□ 0.21
RPS6KC1-206ENST00000543354 RAPGEF4Q8WZA2 1011 aa16.38■□□□□ 0.21
RPS6KC1-206ENST00000543354 BOLA2Q9H3K6 86 aa16.38■□□□□ 0.21
RPS6KC1-206ENST00000543354 ANKRD20A12PQ8NF67 263 aa16.38■□□□□ 0.21
RPS6KC1-206ENST00000543354 RAB11FIP3O75154 756 aa16.37■□□□□ 0.21
RPS6KC1-206ENST00000543354 MBIPQ9NS73 344 aa16.37■□□□□ 0.21
RPS6KC1-206ENST00000543354 HOOK1Q9UJC3 728 aaKnown RBP16.37■□□□□ 0.21
RPS6KC1-206ENST00000543354 TNNT1P13805 278 aa16.37■□□□□ 0.21
RPS6KC1-206ENST00000543354 NAP1L1P55209 391 aaKnown RBP16.37■□□□□ 0.21
RPS6KC1-206ENST00000543354 ZBTB9Q96C00 473 aa16.37■□□□□ 0.21
RPS6KC1-206ENST00000543354 CARD14Q9BXL6 1004 aa16.36■□□□□ 0.21
RPS6KC1-206ENST00000543354 TSPYL6Q8N831 410 aa16.36■□□□□ 0.21
RPS6KC1-206ENST00000543354 PTPN14Q15678 1187 aa16.36■□□□□ 0.21
RPS6KC1-206ENST00000543354 TTC22Q5TAA0 569 aa16.36■□□□□ 0.21
RPS6KC1-206ENST00000543354 CCDC70Q6NSX1 233 aa16.35■□□□□ 0.21
RPS6KC1-206ENST00000543354 CCDC85AQ96PX6 553 aaPredicted RBP16.35■□□□□ 0.21
RPS6KC1-206ENST00000543354 TEX14Q8IWB6 1497 aa16.35■□□□□ 0.21
RPS6KC1-206ENST00000543354 RAD21O60216 631 aa16.35■□□□□ 0.21
RPS6KC1-206ENST00000543354 KRT24Q2M2I5 525 aa16.35■□□□□ 0.21
RPS6KC1-206ENST00000543354 CCDC8Q9H0W5 538 aaPredicted RBP16.35■□□□□ 0.21
RPS6KC1-206ENST00000543354 LRSAM1Q6UWE0 723 aa16.35■□□□□ 0.21
RPS6KC1-206ENST00000543354 CEP57L1Q8IYX8 460 aa16.35■□□□□ 0.21
RPS6KC1-206ENST00000543354 PPP6R1Q9UPN7 881 aa16.35■□□□□ 0.21
RPS6KC1-206ENST00000543354 RAB3GAP1Q15042 981 aa16.34■□□□□ 0.21
RPS6KC1-206ENST00000543354 NECAB1Q8N987 351 aa16.34■□□□□ 0.21
RPS6KC1-206ENST00000543354 ZKSCAN5Q9Y2L8 839 aa16.34■□□□□ 0.21
RPS6KC1-206ENST00000543354 ANXA1P04083 346 aa16.34■□□□□ 0.21
RPS6KC1-206ENST00000543354 TAF7Q15545 349 aaPredicted RBP16.34■□□□□ 0.21
RPS6KC1-206ENST00000543354 ZNF530Q6P9A1 599 aaPredicted RBP16.34■□□□□ 0.21
RPS6KC1-206ENST00000543354 UBXN4Q92575 508 aa16.34■□□□□ 0.21
RPS6KC1-206ENST00000543354 ZNF396Q96N95 335 aaPredicted RBP16.34■□□□□ 0.21
RPS6KC1-206ENST00000543354 LIMCH1Q9UPQ0 1083 aa16.34■□□□□ 0.21
RPS6KC1-206ENST00000543354 STX6O43752 255 aa16.34■□□□□ 0.21
RPS6KC1-206ENST00000543354 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.34■□□□□ 0.21
RPS6KC1-206ENST00000543354 V9GYY5 206 aaPredicted RBP16.34■□□□□ 0.21
RPS6KC1-206ENST00000543354 DENND4BO75064 1496 aaPredicted RBP16.33■□□□□ 0.21
RPS6KC1-206ENST00000543354 FKBP4Q02790 459 aaKnown RBP eCLIP16.33■□□□□ 0.21
RPS6KC1-206ENST00000543354 CNPY2Q9Y2B0 182 aa16.33■□□□□ 0.21
RPS6KC1-206ENST00000543354 POLR3GO15318 223 aaPredicted RBP16.33■□□□□ 0.2
RPS6KC1-206ENST00000543354 C8orf58Q8NAV2 365 aa16.33■□□□□ 0.2
RPS6KC1-206ENST00000543354 TMX1Q9H3N1 280 aa16.33■□□□□ 0.2
RPS6KC1-206ENST00000543354 CLIP2Q9UDT6 1046 aa16.33■□□□□ 0.2
RPS6KC1-206ENST00000543354 CCDC61Q9Y6R9 512 aa16.33■□□□□ 0.2
RPS6KC1-206ENST00000543354 DHX16O60231 1041 aaKnown RBP16.33■□□□□ 0.2
RPS6KC1-206ENST00000543354 NOLC1Q14978 699 aaKnown RBP eCLIP16.33■□□□□ 0.2
RPS6KC1-206ENST00000543354 BIN1O00499 593 aa16.32■□□□□ 0.2
RPS6KC1-206ENST00000543354 ERICH2A1L162 156 aa16.32■□□□□ 0.2
RPS6KC1-206ENST00000543354 ANKRD1Q15327 319 aa16.32■□□□□ 0.2
RPS6KC1-206ENST00000543354 CFAP100Q494V2 611 aa16.32■□□□□ 0.2
RPS6KC1-206ENST00000543354 USHBP1Q8N6Y0 703 aa16.32■□□□□ 0.2
RPS6KC1-206ENST00000543354 NUDT16Q96DE0 195 aaKnown RBP16.32■□□□□ 0.2
RPS6KC1-206ENST00000543354 KIF1BPQ96EK5 621 aa16.32■□□□□ 0.2
RPS6KC1-206ENST00000543354 DYNC1I1O14576 645 aa16.32■□□□□ 0.2
RPS6KC1-206ENST00000543354 ZNF165P49910 485 aa16.32■□□□□ 0.2
RPS6KC1-206ENST00000543354 AXDND1Q5T1B0 1012 aaPredicted RBP16.32■□□□□ 0.2
RPS6KC1-206ENST00000543354 ZSCAN31Q96LW9 406 aaPredicted RBP16.32■□□□□ 0.2
RPS6KC1-206ENST00000543354 RTEL1-TNFRSF6BF6WH68 1400 aa16.32■□□□□ 0.2
RPS6KC1-206ENST00000543354 SNAPC4Q5SXM2 1469 aa16.31■□□□□ 0.2
RPS6KC1-206ENST00000543354 HIP1O00291 1037 aa16.31■□□□□ 0.2
RPS6KC1-206ENST00000543354 SETQ01105 290 aaPredicted RBP16.31■□□□□ 0.2
RPS6KC1-206ENST00000543354 ISM2Q6H9L7 571 aa16.31■□□□□ 0.2
RPS6KC1-206ENST00000543354 USP48Q86UV5 1035 aa16.31■□□□□ 0.2
RPS6KC1-206ENST00000543354 SMC5Q8IY18 1101 aa16.31■□□□□ 0.2
RPS6KC1-206ENST00000543354 CAGE1Q8TC20 777 aa16.31■□□□□ 0.2
RPS6KC1-206ENST00000543354 CFAP45Q9UL16 551 aa16.31■□□□□ 0.2
RPS6KC1-206ENST00000543354 GJB2P29033 226 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms