RNA–Protein interactions for RNA: ENST00000542687.1

MRPL40P1-201, Transcript of mitochondrial ribosomal protein L40 pseudogene 1, humanhuman

BASIC

Gene MRPL40P1, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40P1-201ENST00000542687 NCAPD2Q15021 1401 aa10.52□□□□□ -0.73
MRPL40P1-201ENST00000542687 PDE3BQ13370 1112 aa10.52□□□□□ -0.73
MRPL40P1-201ENST00000542687 ZNF530Q6P9A1 599 aaPredicted RBP10.52□□□□□ -0.73
MRPL40P1-201ENST00000542687 WWC1Q8IX03 1113 aa10.52□□□□□ -0.73
MRPL40P1-201ENST00000542687 RTF1Q92541 710 aaKnown RBP10.52□□□□□ -0.73
MRPL40P1-201ENST00000542687 CDCA7Q9BWT1 371 aaPredicted RBP10.52□□□□□ -0.73
MRPL40P1-201ENST00000542687 SPATA31A1Q5TZJ5 1347 aa10.52□□□□□ -0.73
MRPL40P1-201ENST00000542687 SPATA31A5Q5VU36 1347 aa10.52□□□□□ -0.73
MRPL40P1-201ENST00000542687 SPATA31A7Q8IWB4 1347 aa10.52□□□□□ -0.73
MRPL40P1-201ENST00000542687 COL18A1P39060 1754 aa10.52□□□□□ -0.73
MRPL40P1-201ENST00000542687 SRCAPQ6ZRS2 3230 aa10.51□□□□□ -0.73
MRPL40P1-201ENST00000542687 ABCA3Q99758 1704 aa10.51□□□□□ -0.73
MRPL40P1-201ENST00000542687 HTATSF1O43719 755 aaKnown RBP10.51□□□□□ -0.73
MRPL40P1-201ENST00000542687 CENPBP07199 599 aaPredicted RBP10.51□□□□□ -0.73
MRPL40P1-201ENST00000542687 CALD1Q05682 793 aaKnown RBP10.51□□□□□ -0.73
MRPL40P1-201ENST00000542687 C1orf141Q5JVX7 400 aa10.51□□□□□ -0.73
MRPL40P1-201ENST00000542687 WDR63Q8IWG1 891 aa10.51□□□□□ -0.73
MRPL40P1-201ENST00000542687 ZCRB1Q8TBF4 217 aaKnown RBP10.51□□□□□ -0.73
MRPL40P1-201ENST00000542687 TRIM35Q9UPQ4 493 aa10.51□□□□□ -0.73
MRPL40P1-201ENST00000542687 LMO7Q8WWI1 1683 aa10.5□□□□□ -0.73
MRPL40P1-201ENST00000542687 BCL9LQ86UU0 1499 aa10.5□□□□□ -0.73
MRPL40P1-201ENST00000542687 GNAT3A8MTJ3 354 aa10.5□□□□□ -0.73
MRPL40P1-201ENST00000542687 GOLGA2Q08379 1002 aa10.5□□□□□ -0.73
MRPL40P1-201ENST00000542687 AKAP4Q5JQC9 854 aa10.5□□□□□ -0.73
MRPL40P1-201ENST00000542687 BARGINQ6ZT62 677 aa10.5□□□□□ -0.73
MRPL40P1-201ENST00000542687 TRPC5Q9UL62 973 aaPredicted RBP10.5□□□□□ -0.73
MRPL40P1-201ENST00000542687 PLEKHG2Q9H7P9 1386 aa10.5□□□□□ -0.73
MRPL40P1-201ENST00000542687 EXOC5O00471 708 aa10.49□□□□□ -0.73
MRPL40P1-201ENST00000542687 IFNL2Q8IZJ0 200 aa10.49□□□□□ -0.73
MRPL40P1-201ENST00000542687 QTRT2Q9H974 415 aaKnown RBP10.49□□□□□ -0.73
MRPL40P1-201ENST00000542687 ZNF521Q96K83 1311 aa10.49□□□□□ -0.73
MRPL40P1-201ENST00000542687 RGPD1P0DJD0 1748 aa10.49□□□□□ -0.73
MRPL40P1-201ENST00000542687 HSP90AB1P08238 724 aaKnown RBP10.48□□□□□ -0.73
MRPL40P1-201ENST00000542687 MCM10Q7L590 875 aa10.48□□□□□ -0.73
MRPL40P1-201ENST00000542687 DDX54Q8TDD1 881 aaKnown RBP10.48□□□□□ -0.73
MRPL40P1-201ENST00000542687 GJD4Q96KN9 370 aaPredicted RBP10.48□□□□□ -0.73
MRPL40P1-201ENST00000542687 OVOS2A0A0G2JMS6 1433 aa10.48□□□□□ -0.73
MRPL40P1-201ENST00000542687 E9PSI1 815 aa10.47□□□□□ -0.73
MRPL40P1-201ENST00000542687 PHKG2P15735 406 aa10.47□□□□□ -0.73
MRPL40P1-201ENST00000542687 RXRBP28702 533 aa10.47□□□□□ -0.73
MRPL40P1-201ENST00000542687 DCTN1Q14203 1278 aa10.47□□□□□ -0.73
MRPL40P1-201ENST00000542687 FAM98CQ17RN3 349 aaKnown RBP10.47□□□□□ -0.73
MRPL40P1-201ENST00000542687 CDCA7LQ96GN5 454 aa10.47□□□□□ -0.73
MRPL40P1-201ENST00000542687 THUMPD2Q9BTF0 503 aaKnown RBP10.47□□□□□ -0.73
MRPL40P1-201ENST00000542687 IL16Q14005 1332 aa10.47□□□□□ -0.73
MRPL40P1-201ENST00000542687 PCDH11XQ9BZA7 1347 aa10.47□□□□□ -0.73
MRPL40P1-201ENST00000542687 PCDH11YQ9BZA8 1340 aa10.47□□□□□ -0.73
MRPL40P1-201ENST00000542687 MAP3K5Q99683 1374 aa10.47□□□□□ -0.73
MRPL40P1-201ENST00000542687 MEGF6O75095 1541 aa10.47□□□□□ -0.73
MRPL40P1-201ENST00000542687 A0A0G2JS52 829 aa10.46□□□□□ -0.73
MRPL40P1-201ENST00000542687 CYP27B1O15528 508 aa10.46□□□□□ -0.73
MRPL40P1-201ENST00000542687 MYT1Q01538 1121 aa10.46□□□□□ -0.73
MRPL40P1-201ENST00000542687 SLFN5Q08AF3 891 aa10.46□□□□□ -0.73
MRPL40P1-201ENST00000542687 DDB1Q16531 1140 aa10.46□□□□□ -0.73
MRPL40P1-201ENST00000542687 MPRIPQ6WCQ1 1025 aa10.46□□□□□ -0.73
MRPL40P1-201ENST00000542687 IL17REQ8NFR9 667 aa10.46□□□□□ -0.73
MRPL40P1-201ENST00000542687 DCAF5Q96JK2 942 aa10.46□□□□□ -0.73
MRPL40P1-201ENST00000542687 MYH16Q9H6N6 1097 aa10.46□□□□□ -0.73
MRPL40P1-201ENST00000542687 LAS1LQ9Y4W2 734 aaKnown RBP10.46□□□□□ -0.73
MRPL40P1-201ENST00000542687 RNMTO43148 476 aaKnown RBP10.45□□□□□ -0.74
MRPL40P1-201ENST00000542687 GNAI1P63096 354 aa10.45□□□□□ -0.74
MRPL40P1-201ENST00000542687 LGR6Q9HBX8 967 aa10.45□□□□□ -0.74
MRPL40P1-201ENST00000542687 IFT57Q9NWB7 429 aa10.45□□□□□ -0.74
MRPL40P1-201ENST00000542687 DISP2A7MBM2 1401 aa10.44□□□□□ -0.74
MRPL40P1-201ENST00000542687 ATRNO75882 1429 aa10.44□□□□□ -0.74
MRPL40P1-201ENST00000542687 TEFQ10587 303 aa10.44□□□□□ -0.74
MRPL40P1-201ENST00000542687 NKX1-1Q15270 411 aaPredicted RBP10.44□□□□□ -0.74
MRPL40P1-201ENST00000542687 TAF7Q15545 349 aaPredicted RBP10.44□□□□□ -0.74
MRPL40P1-201ENST00000542687 CFAP44Q96MT7 982 aa10.44□□□□□ -0.74
MRPL40P1-201ENST00000542687 SPINK5Q9NQ38 1064 aaPredicted RBP10.44□□□□□ -0.74
MRPL40P1-201ENST00000542687 FAM208AQ9UK61 1670 aaKnown RBP10.44□□□□□ -0.74
MRPL40P1-201ENST00000542687 RGS12O14924 1447 aa10.43□□□□□ -0.74
MRPL40P1-201ENST00000542687 ONECUT3O60422 494 aaPredicted RBP10.43□□□□□ -0.74
MRPL40P1-201ENST00000542687 TRMT2AQ8IZ69 625 aaKnown RBP10.43□□□□□ -0.74
MRPL40P1-201ENST00000542687 RGPD5Q99666 1765 aa10.43□□□□□ -0.74
MRPL40P1-201ENST00000542687 PLCH1Q4KWH8 1693 aa10.43□□□□□ -0.74
MRPL40P1-201ENST00000542687 NWD2Q9ULI1 1742 aa10.42□□□□□ -0.74
MRPL40P1-201ENST00000542687 CHL1O00533 1208 aa10.42□□□□□ -0.74
MRPL40P1-201ENST00000542687 ZNF853P0CG23 659 aa10.42□□□□□ -0.74
MRPL40P1-201ENST00000542687 CABP4P57796 275 aa10.42□□□□□ -0.74
MRPL40P1-201ENST00000542687 RBM6P78332 1123 aaKnown RBP10.42□□□□□ -0.74
MRPL40P1-201ENST00000542687 DUSP27Q5VZP5 1158 aa10.42□□□□□ -0.74
MRPL40P1-201ENST00000542687 BABAM1Q9NWV8 329 aa10.42□□□□□ -0.74
MRPL40P1-201ENST00000542687 TSPYL4Q9UJ04 414 aa10.42□□□□□ -0.74
MRPL40P1-201ENST00000542687 ERVV-2B6SEH9 535 aa10.41□□□□□ -0.74
MRPL40P1-201ENST00000542687 SEPT12Q8IYM1 358 aa10.41□□□□□ -0.74
MRPL40P1-201ENST00000542687 TSR2Q969E8 191 aaKnown RBP10.41□□□□□ -0.74
MRPL40P1-201ENST00000542687 SLC52A2Q9HAB3 445 aa10.41□□□□□ -0.74
MRPL40P1-201ENST00000542687 MBIPQ9NS73 344 aa10.41□□□□□ -0.74
MRPL40P1-201ENST00000542687 MIS18AQ9NYP9 233 aa10.41□□□□□ -0.74
MRPL40P1-201ENST00000542687 NRAPQ86VF7 1730 aa10.41□□□□□ -0.74
MRPL40P1-201ENST00000542687 CEMIPQ8WUJ3 1361 aa10.4□□□□□ -0.74
MRPL40P1-201ENST00000542687 FANCIQ9NVI1 1328 aa10.4□□□□□ -0.74
MRPL40P1-201ENST00000542687 BTBD11A6QL63 1104 aa10.4□□□□□ -0.74
MRPL40P1-201ENST00000542687 MARCH10Q8NA82 808 aaPredicted RBP10.4□□□□□ -0.74
MRPL40P1-201ENST00000542687 NFATC2IPQ8NCF5 419 aa10.4□□□□□ -0.74
MRPL40P1-201ENST00000542687 RGPD2P0DJD1 1756 aa10.39□□□□□ -0.75
MRPL40P1-201ENST00000542687 UPF1Q92900 1129 aaKnown RBP eCLIP10.39□□□□□ -0.75
MRPL40P1-201ENST00000542687 TNS2Q63HR2 1409 aa10.39□□□□□ -0.75
MRPL40P1-201ENST00000542687 EXOSC9Q06265 439 aaKnown RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms