RNA–Protein interactions for RNA: ENST00000542338.1

NPIPB4-216, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 387 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-216ENST00000542338 KDRP35968 1356 aa12.37□□□□□ -0.43
NPIPB4-216ENST00000542338 SPATA31A5Q5VU36 1347 aa12.37□□□□□ -0.43
NPIPB4-216ENST00000542338 SPATA31A7Q8IWB4 1347 aa12.37□□□□□ -0.43
NPIPB4-216ENST00000542338 PLEKHG2Q9H7P9 1386 aa12.36□□□□□ -0.43
NPIPB4-216ENST00000542338 ONECUT3O60422 494 aaPredicted RBP12.36□□□□□ -0.43
NPIPB4-216ENST00000542338 PDE3BQ13370 1112 aa12.36□□□□□ -0.43
NPIPB4-216ENST00000542338 KRT27Q7Z3Y8 459 aa12.36□□□□□ -0.43
NPIPB4-216ENST00000542338 TCP11L2Q8N4U5 519 aa12.36□□□□□ -0.43
NPIPB4-216ENST00000542338 NLRP2Q9NX02 1062 aa12.36□□□□□ -0.43
NPIPB4-216ENST00000542338 RGPD1P0DJD0 1748 aa12.36□□□□□ -0.43
NPIPB4-216ENST00000542338 WDR17Q8IZU2 1322 aa12.36□□□□□ -0.43
NPIPB4-216ENST00000542338 THSD7AQ9UPZ6 1657 aa12.35□□□□□ -0.43
NPIPB4-216ENST00000542338 LMOD3Q0VAK6 560 aa12.35□□□□□ -0.43
NPIPB4-216ENST00000542338 CCDC27Q2M243 656 aa12.35□□□□□ -0.43
NPIPB4-216ENST00000542338 AMOTQ4VCS5 1084 aa12.35□□□□□ -0.43
NPIPB4-216ENST00000542338 NBPF6Q5VWK0 638 aa12.35□□□□□ -0.43
NPIPB4-216ENST00000542338 NBPF4Q96M43 638 aa12.35□□□□□ -0.43
NPIPB4-216ENST00000542338 STRN4Q9NRL3 753 aa12.35□□□□□ -0.43
NPIPB4-216ENST00000542338 FAM98CQ17RN3 349 aaKnown RBP12.34□□□□□ -0.43
NPIPB4-216ENST00000542338 TOM1L2Q6ZVM7 507 aa12.34□□□□□ -0.43
NPIPB4-216ENST00000542338 GAS2L2Q8NHY3 880 aa12.34□□□□□ -0.43
NPIPB4-216ENST00000542338 RAPGEF4Q8WZA2 1011 aa12.34□□□□□ -0.43
NPIPB4-216ENST00000542338 SPATA31A1Q5TZJ5 1347 aa12.34□□□□□ -0.43
NPIPB4-216ENST00000542338 COL18A1P39060 1754 aa12.33□□□□□ -0.44
NPIPB4-216ENST00000542338 CAMTA1Q9Y6Y1 1673 aa12.33□□□□□ -0.44
NPIPB4-216ENST00000542338 TMPOP42166 694 aaKnown RBP12.33□□□□□ -0.44
NPIPB4-216ENST00000542338 CALD1Q05682 793 aaKnown RBP12.33□□□□□ -0.44
NPIPB4-216ENST00000542338 NFE2L2Q16236 605 aa12.33□□□□□ -0.44
NPIPB4-216ENST00000542338 PLEKHO1Q53GL0 409 aaPredicted RBP12.33□□□□□ -0.44
NPIPB4-216ENST00000542338 DEFB132Q7Z7B7 95 aa12.33□□□□□ -0.44
NPIPB4-216ENST00000542338 CARD10Q9BWT7 1032 aa12.33□□□□□ -0.44
NPIPB4-216ENST00000542338 COL5A2P05997 1499 aaPredicted RBP12.33□□□□□ -0.44
NPIPB4-216ENST00000542338 CRB1P82279 1406 aa12.32□□□□□ -0.44
NPIPB4-216ENST00000542338 NCAPD2Q15021 1401 aa12.32□□□□□ -0.44
NPIPB4-216ENST00000542338 HTATSF1O43719 755 aaKnown RBP12.32□□□□□ -0.44
NPIPB4-216ENST00000542338 TATP17735 454 aaPredicted RBP12.32□□□□□ -0.44
NPIPB4-216ENST00000542338 RIPK4P57078 832 aa12.32□□□□□ -0.44
NPIPB4-216ENST00000542338 AEBP1Q8IUX7 1158 aa12.32□□□□□ -0.44
NPIPB4-216ENST00000542338 RNF39Q9H2S5 420 aa12.32□□□□□ -0.44
NPIPB4-216ENST00000542338 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.32□□□□□ -0.44
NPIPB4-216ENST00000542338 THRAP3Q9Y2W1 955 aaKnown RBP12.32□□□□□ -0.44
NPIPB4-216ENST00000542338 FAM208AQ9UK61 1670 aaKnown RBP12.32□□□□□ -0.44
NPIPB4-216ENST00000542338 BAG6P46379 1132 aa12.31□□□□□ -0.44
NPIPB4-216ENST00000542338 CACNB1Q02641 598 aaPredicted RBP12.31□□□□□ -0.44
NPIPB4-216ENST00000542338 NEUROD2Q15784 382 aa12.31□□□□□ -0.44
NPIPB4-216ENST00000542338 WDR63Q8IWG1 891 aa12.31□□□□□ -0.44
NPIPB4-216ENST00000542338 PHACTR3Q96KR7 559 aa12.31□□□□□ -0.44
NPIPB4-216ENST00000542338 LRP5O75197 1615 aa12.3□□□□□ -0.44
NPIPB4-216ENST00000542338 GOLGA2Q08379 1002 aa12.3□□□□□ -0.44
NPIPB4-216ENST00000542338 BARGINQ6ZT62 677 aa12.3□□□□□ -0.44
NPIPB4-216ENST00000542338 WWC1Q8IX03 1113 aa12.3□□□□□ -0.44
NPIPB4-216ENST00000542338 SPG7Q9UQ90 795 aa12.3□□□□□ -0.44
NPIPB4-216ENST00000542338 SALL2Q9Y467 1007 aaPredicted RBP12.3□□□□□ -0.44
NPIPB4-216ENST00000542338 TNS1Q9HBL0 1735 aaKnown RBP12.3□□□□□ -0.44
NPIPB4-216ENST00000542338 SLC4A2P04920 1241 aa12.29□□□□□ -0.44
NPIPB4-216ENST00000542338 LARP1Q6PKG0 1096 aaKnown RBP12.29□□□□□ -0.44
NPIPB4-216ENST00000542338 USHBP1Q8N6Y0 703 aa12.29□□□□□ -0.44
NPIPB4-216ENST00000542338 RTF1Q92541 710 aaKnown RBP12.29□□□□□ -0.44
NPIPB4-216ENST00000542338 CDCA7Q9BWT1 371 aaPredicted RBP12.29□□□□□ -0.44
NPIPB4-216ENST00000542338 PARP4Q9UKK3 1724 aaKnown RBP12.28□□□□□ -0.44
NPIPB4-216ENST00000542338 IL2RBP14784 551 aa12.28□□□□□ -0.44
NPIPB4-216ENST00000542338 MTHFSDQ2M296 383 aaKnown RBP12.28□□□□□ -0.44
NPIPB4-216ENST00000542338 USP35Q9P2H5 1018 aa12.28□□□□□ -0.44
NPIPB4-216ENST00000542338 RRP7AQ9Y3A4 280 aaKnown RBP12.28□□□□□ -0.44
NPIPB4-216ENST00000542338 IL16Q14005 1332 aa12.28□□□□□ -0.44
NPIPB4-216ENST00000542338 ZNF521Q96K83 1311 aa12.28□□□□□ -0.44
NPIPB4-216ENST00000542338 SRCAPQ6ZRS2 3230 aa12.28□□□□□ -0.44
NPIPB4-216ENST00000542338 GNAT3A8MTJ3 354 aa12.27□□□□□ -0.45
NPIPB4-216ENST00000542338 E9PSI1 815 aa12.27□□□□□ -0.45
NPIPB4-216ENST00000542338 C1orf141Q5JVX7 400 aa12.27□□□□□ -0.45
NPIPB4-216ENST00000542338 RGPD5Q99666 1765 aa12.26□□□□□ -0.45
NPIPB4-216ENST00000542338 WNK3Q9BYP7 1800 aa12.26□□□□□ -0.45
NPIPB4-216ENST00000542338 HSP90AB1P08238 724 aaKnown RBP12.26□□□□□ -0.45
NPIPB4-216ENST00000542338 AKAP4Q5JQC9 854 aa12.26□□□□□ -0.45
NPIPB4-216ENST00000542338 MYH16Q9H6N6 1097 aa12.26□□□□□ -0.45
NPIPB4-216ENST00000542338 TRIM35Q9UPQ4 493 aa12.26□□□□□ -0.45
NPIPB4-216ENST00000542338 FAM182BQ5T319 152 aa12.25□□□□□ -0.45
NPIPB4-216ENST00000542338 ZNF530Q6P9A1 599 aaPredicted RBP12.25□□□□□ -0.45
NPIPB4-216ENST00000542338 FAM196AQ6ZSG2 479 aa12.25□□□□□ -0.45
NPIPB4-216ENST00000542338 IFNL2Q8IZJ0 200 aa12.25□□□□□ -0.45
NPIPB4-216ENST00000542338 ZCRB1Q8TBF4 217 aaKnown RBP12.25□□□□□ -0.45
NPIPB4-216ENST00000542338 DISP2A7MBM2 1401 aa12.24□□□□□ -0.45
NPIPB4-216ENST00000542338 LRRC37A3O60309 1634 aa12.24□□□□□ -0.45
NPIPB4-216ENST00000542338 SLFN5Q08AF3 891 aa12.24□□□□□ -0.45
NPIPB4-216ENST00000542338 MAP3K5Q99683 1374 aa12.24□□□□□ -0.45
NPIPB4-216ENST00000542338 OVOS2A0A0G2JMS6 1433 aa12.23□□□□□ -0.45
NPIPB4-216ENST00000542338 SENP3-EIF4A1A0A087X0R7 540 aa12.23□□□□□ -0.45
NPIPB4-216ENST00000542338 PSDA5PKW4 1024 aaPredicted RBP12.23□□□□□ -0.45
NPIPB4-216ENST00000542338 GNAI1P63096 354 aa12.23□□□□□ -0.45
NPIPB4-216ENST00000542338 EN1Q05925 392 aaPredicted RBP12.23□□□□□ -0.45
NPIPB4-216ENST00000542338 BABAM1Q9NWV8 329 aa12.23□□□□□ -0.45
NPIPB4-216ENST00000542338 PCDH11XQ9BZA7 1347 aa12.22□□□□□ -0.45
NPIPB4-216ENST00000542338 PCDH11YQ9BZA8 1340 aa12.22□□□□□ -0.45
NPIPB4-216ENST00000542338 EXOC5O00471 708 aa12.22□□□□□ -0.45
NPIPB4-216ENST00000542338 IFT57Q9NWB7 429 aa12.22□□□□□ -0.45
NPIPB4-216ENST00000542338 DDB1Q16531 1140 aa12.21□□□□□ -0.45
NPIPB4-216ENST00000542338 TRMT2AQ8IZ69 625 aaKnown RBP12.21□□□□□ -0.45
NPIPB4-216ENST00000542338 CFAP44Q96MT7 982 aa12.21□□□□□ -0.45
NPIPB4-216ENST00000542338 RREB1Q92766 1687 aa12.21□□□□□ -0.45
NPIPB4-216ENST00000542338 RGPD2P0DJD1 1756 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms