RNA–Protein interactions for RNA: ENST00000542188.5

TRPM1-203, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM1, Length 6,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-203ENST00000542188 MCM4P33991 863 aa16.47■□□□□ 0.23
TRPM1-203ENST00000542188 SEPT6Q14141 434 aa16.47■□□□□ 0.23
TRPM1-203ENST00000542188 KIF6Q6ZMV9 814 aa16.46■□□□□ 0.23
TRPM1-203ENST00000542188 TIGD1Q96MW7 591 aa16.46■□□□□ 0.23
TRPM1-203ENST00000542188 MNAT1P51948 309 aa16.46■□□□□ 0.23
TRPM1-203ENST00000542188 SRCIN1Q9C0H9 1055 aa16.46■□□□□ 0.23
TRPM1-203ENST00000542188 ANO10Q9NW15 660 aa16.46■□□□□ 0.23
TRPM1-203ENST00000542188 SSBP05455 408 aaKnown RBP eCLIP16.46■□□□□ 0.23
TRPM1-203ENST00000542188 KRT32Q14532 448 aa16.46■□□□□ 0.22
TRPM1-203ENST00000542188 MIA2Q96PC5 1412 aa16.45■□□□□ 0.22
TRPM1-203ENST00000542188 FGFR1OPO95684 399 aaKnown RBP16.45■□□□□ 0.22
TRPM1-203ENST00000542188 HSPA4P34932 840 aa16.45■□□□□ 0.22
TRPM1-203ENST00000542188 HNRNPMP52272 730 aaKnown RBP eCLIP16.45■□□□□ 0.22
TRPM1-203ENST00000542188 SPECC1Q5M775 1068 aa16.45■□□□□ 0.22
TRPM1-203ENST00000542188 DDX12PQ92771 950 aa16.45■□□□□ 0.22
TRPM1-203ENST00000542188 MINK1Q8N4C8 1332 aaPredicted RBP16.45■□□□□ 0.22
TRPM1-203ENST00000542188 BLOC1S2Q6QNY1 142 aa16.44■□□□□ 0.22
TRPM1-203ENST00000542188 RAI14Q9P0K7 980 aa16.44■□□□□ 0.22
TRPM1-203ENST00000542188 CTNNA3Q9UI47 895 aa16.44■□□□□ 0.22
TRPM1-203ENST00000542188 CEP112Q8N8E3 955 aa16.44■□□□□ 0.22
TRPM1-203ENST00000542188 NUP133Q8WUM0 1156 aa16.44■□□□□ 0.22
TRPM1-203ENST00000542188 ALS2CR12Q96Q35 445 aa16.44■□□□□ 0.22
TRPM1-203ENST00000542188 TOP1P11387 765 aaKnown RBP16.44■□□□□ 0.22
TRPM1-203ENST00000542188 CACNA2D4Q7Z3S7 1137 aa16.43■□□□□ 0.22
TRPM1-203ENST00000542188 FBF1Q8TES7 1133 aa16.43■□□□□ 0.22
TRPM1-203ENST00000542188 FSD2A1L4K1 749 aa16.43■□□□□ 0.22
TRPM1-203ENST00000542188 GOLGA6L9A6NEM1 432 aa16.43■□□□□ 0.22
TRPM1-203ENST00000542188 MPHOSPH10O00566 681 aaKnown RBP16.43■□□□□ 0.22
TRPM1-203ENST00000542188 RBM25P49756 843 aaKnown RBP16.43■□□□□ 0.22
TRPM1-203ENST00000542188 PDE3AQ14432 1141 aa16.43■□□□□ 0.22
TRPM1-203ENST00000542188 WDR66Q8TBY9 1149 aa16.43■□□□□ 0.22
TRPM1-203ENST00000542188 IVLP07476 585 aa16.43■□□□□ 0.22
TRPM1-203ENST00000542188 BBXQ8WY36 941 aaPredicted RBP16.43■□□□□ 0.22
TRPM1-203ENST00000542188 HOMER2Q9NSB8 354 aa16.43■□□□□ 0.22
TRPM1-203ENST00000542188 NSRP1Q9H0G5 558 aaKnown RBP16.43■□□□□ 0.22
TRPM1-203ENST00000542188 CCDC183Q5T5S1 534 aa16.43■□□□□ 0.22
TRPM1-203ENST00000542188 BRD4O60885 1362 aaPredicted RBP16.42■□□□□ 0.22
TRPM1-203ENST00000542188 ATP2B2Q01814 1243 aa16.42■□□□□ 0.22
TRPM1-203ENST00000542188 PSME1Q06323 249 aa16.42■□□□□ 0.22
TRPM1-203ENST00000542188 DDX46Q7L014 1031 aaKnown RBP16.42■□□□□ 0.22
TRPM1-203ENST00000542188 TSNARE1Q96NA8 513 aa16.42■□□□□ 0.22
TRPM1-203ENST00000542188 RRBP1Q9P2E9 1410 aaKnown RBP16.42■□□□□ 0.22
TRPM1-203ENST00000542188 YEATS4O95619 227 aa16.42■□□□□ 0.22
TRPM1-203ENST00000542188 CNNM1Q9NRU3 951 aa16.42■□□□□ 0.22
TRPM1-203ENST00000542188 TNNT1P13805 278 aa16.42■□□□□ 0.22
TRPM1-203ENST00000542188 TRERF1Q96PN7 1200 aa16.42■□□□□ 0.22
TRPM1-203ENST00000542188 ZNF76P36508 570 aa16.42■□□□□ 0.22
TRPM1-203ENST00000542188 LMAN1P49257 510 aa16.41■□□□□ 0.22
TRPM1-203ENST00000542188 GSDMDP57764 484 aa16.41■□□□□ 0.22
TRPM1-203ENST00000542188 CTNNBL1Q8WYA6 563 aaPredicted RBP16.41■□□□□ 0.22
TRPM1-203ENST00000542188 SYCE3A1L190 88 aa16.41■□□□□ 0.22
TRPM1-203ENST00000542188 NAP1L3Q99457 506 aaPredicted RBP16.41■□□□□ 0.22
TRPM1-203ENST00000542188 CLIP2Q9UDT6 1046 aa16.41■□□□□ 0.22
TRPM1-203ENST00000542188 CCDC6Q16204 474 aa16.41■□□□□ 0.22
TRPM1-203ENST00000542188 PPP4R3BQ5MIZ7 849 aa16.41■□□□□ 0.22
TRPM1-203ENST00000542188 MCM5P33992 734 aa16.4■□□□□ 0.22
TRPM1-203ENST00000542188 CCT4P50991 539 aaKnown RBP16.4■□□□□ 0.22
TRPM1-203ENST00000542188 SREK1Q8WXA9 508 aaKnown RBP16.4■□□□□ 0.22
TRPM1-203ENST00000542188 CLGNO14967 610 aa16.4■□□□□ 0.22
TRPM1-203ENST00000542188 CNTLNQ9NXG0 1405 aa16.4■□□□□ 0.22
TRPM1-203ENST00000542188 GAS2L2Q8NHY3 880 aa16.4■□□□□ 0.22
TRPM1-203ENST00000542188 CTAGE5O15320 804 aa16.4■□□□□ 0.22
TRPM1-203ENST00000542188 NOL3O60936 208 aaKnown RBP16.4■□□□□ 0.22
TRPM1-203ENST00000542188 HSF2BPO75031 334 aa16.4■□□□□ 0.22
TRPM1-203ENST00000542188 MAATS1Q7Z4T9 603 aa16.4■□□□□ 0.22
TRPM1-203ENST00000542188 PHAXQ9H814 394 aaKnown RBP16.4■□□□□ 0.22
TRPM1-203ENST00000542188 UBAC1Q9BSL1 405 aa16.4■□□□□ 0.22
TRPM1-203ENST00000542188 HMOX1P09601 288 aa16.39■□□□□ 0.21
TRPM1-203ENST00000542188 DHX57Q6P158 1386 aaKnown RBP16.39■□□□□ 0.21
TRPM1-203ENST00000542188 ZWINTO95229 277 aa16.39■□□□□ 0.21
TRPM1-203ENST00000542188 HLTFQ14527 1009 aaKnown RBP eCLIP16.39■□□□□ 0.21
TRPM1-203ENST00000542188 BACH2Q9BYV9 841 aa16.39■□□□□ 0.21
TRPM1-203ENST00000542188 FAM114A1Q8IWE2 563 aa16.39■□□□□ 0.21
TRPM1-203ENST00000542188 CCDC150Q8NCX0 1101 aa16.39■□□□□ 0.21
TRPM1-203ENST00000542188 TNIP1Q15025 636 aa16.38■□□□□ 0.21
TRPM1-203ENST00000542188 DYNC1I1O14576 645 aa16.38■□□□□ 0.21
TRPM1-203ENST00000542188 KIF20AO95235 890 aa16.38■□□□□ 0.21
TRPM1-203ENST00000542188 JAKMIP1Q96N16 626 aaKnown RBP16.38■□□□□ 0.21
TRPM1-203ENST00000542188 CTNNA2P26232 953 aa16.38■□□□□ 0.21
TRPM1-203ENST00000542188 MSL1Q68DK7 614 aa16.38■□□□□ 0.21
TRPM1-203ENST00000542188 COMMD10Q9Y6G5 202 aa16.38■□□□□ 0.21
TRPM1-203ENST00000542188 NUP88Q99567 741 aaPredicted RBP16.37■□□□□ 0.21
TRPM1-203ENST00000542188 PLEKHH1Q9ULM0 1364 aa16.37■□□□□ 0.21
TRPM1-203ENST00000542188 PABPN1LA6NDY0 278 aaKnown RBP16.37■□□□□ 0.21
TRPM1-203ENST00000542188 NBPF1Q3BBV0 1214 aa16.37■□□□□ 0.21
TRPM1-203ENST00000542188 CCDC155Q8N6L0 562 aa16.37■□□□□ 0.21
TRPM1-203ENST00000542188 PUS7Q96PZ0 661 aaKnown RBP16.37■□□□□ 0.21
TRPM1-203ENST00000542188 CCDC160A6NGH7 325 aa16.36■□□□□ 0.21
TRPM1-203ENST00000542188 IRX3P78415 501 aaPredicted RBP16.36■□□□□ 0.21
TRPM1-203ENST00000542188 PAXBP1Q9Y5B6 917 aa16.36■□□□□ 0.21
TRPM1-203ENST00000542188 PPP4R3AQ6IN85 833 aa16.36■□□□□ 0.21
TRPM1-203ENST00000542188 CAMK4Q16566 473 aa16.36■□□□□ 0.21
TRPM1-203ENST00000542188 PPP1R14CQ8TAE6 165 aa16.36■□□□□ 0.21
TRPM1-203ENST00000542188 TMCO5BA8MYB1 307 aa16.35■□□□□ 0.21
TRPM1-203ENST00000542188 EHBP1Q8NDI1 1231 aa16.35■□□□□ 0.21
TRPM1-203ENST00000542188 FERMT1Q9BQL6 677 aa16.35■□□□□ 0.21
TRPM1-203ENST00000542188 SCAND2PQ9GZW5 306 aaPredicted RBP16.35■□□□□ 0.21
TRPM1-203ENST00000542188 PRIMPOLQ96LW4 560 aa16.35■□□□□ 0.21
TRPM1-203ENST00000542188 CCDC7Q96M83 1385 aa16.35■□□□□ 0.21
TRPM1-203ENST00000542188 CKAP4Q07065 602 aaKnown RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms