RNA–Protein interactions for RNA: ENST00000541841.1

CIT-211, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-211ENST00000541841 CEP126Q9P2H0 1117 aa10.31□□□□□ -0.76
CIT-211ENST00000541841 RHOQP17081 205 aa10.3□□□□□ -0.76
CIT-211ENST00000541841 TSGA10IPQ3SY00 556 aa10.3□□□□□ -0.76
CIT-211ENST00000541841 PRICKLE2Q7Z3G6 844 aa10.3□□□□□ -0.76
CIT-211ENST00000541841 SENP3-EIF4A1A0A087X0R7 540 aa10.29□□□□□ -0.76
CIT-211ENST00000541841 A0A1W2PRU2 124 aa10.29□□□□□ -0.76
CIT-211ENST00000541841 SLC35F4A4IF30 521 aa10.29□□□□□ -0.76
CIT-211ENST00000541841 OSBPL3Q9H4L5 887 aa10.29□□□□□ -0.76
CIT-211ENST00000541841 RAB6BQ9NRW1 208 aa10.29□□□□□ -0.76
CIT-211ENST00000541841 MCCD1P59942 119 aaPredicted RBP10.28□□□□□ -0.76
CIT-211ENST00000541841 LYSMD3Q7Z3D4 306 aa10.27□□□□□ -0.77
CIT-211ENST00000541841 ARHGEF10LQ9HCE6 1279 aa10.27□□□□□ -0.77
CIT-211ENST00000541841 CDC14CA4D256 554 aa10.26□□□□□ -0.77
CIT-211ENST00000541841 KRT76Q01546 638 aa10.26□□□□□ -0.77
CIT-211ENST00000541841 ZSCAN1Q8NBB4 408 aa10.26□□□□□ -0.77
CIT-211ENST00000541841 PRM3Q9NNZ6 103 aa10.26□□□□□ -0.77
CIT-211ENST00000541841 STK17AQ9UEE5 414 aa10.26□□□□□ -0.77
CIT-211ENST00000541841 TRAK2O60296 914 aa10.25□□□□□ -0.77
CIT-211ENST00000541841 ITGA6P23229 1130 aa10.25□□□□□ -0.77
CIT-211ENST00000541841 VWA5B2Q8N398 1253 aa10.25□□□□□ -0.77
CIT-211ENST00000541841 CUEDC1Q9NWM3 386 aaPredicted RBP10.25□□□□□ -0.77
CIT-211ENST00000541841 STAU1O95793 577 aaKnown RBP10.24□□□□□ -0.77
CIT-211ENST00000541841 RNF144AP50876 292 aaPredicted RBP10.24□□□□□ -0.77
CIT-211ENST00000541841 EIF4G2P78344 907 aaKnown RBP eCLIP10.24□□□□□ -0.77
CIT-211ENST00000541841 CYP2U1Q7Z449 544 aa10.24□□□□□ -0.77
CIT-211ENST00000541841 ZNF592Q92610 1267 aa10.24□□□□□ -0.77
CIT-211ENST00000541841 POM121Q96HA1 1249 aa10.24□□□□□ -0.77
CIT-211ENST00000541841 CNTNAP3BQ96NU0 1288 aa10.23□□□□□ -0.77
CIT-211ENST00000541841 CNTNAP3Q9BZ76 1288 aa10.23□□□□□ -0.77
CIT-211ENST00000541841 ESF1Q9H501 851 aaKnown RBP10.23□□□□□ -0.77
CIT-211ENST00000541841 COG6Q9Y2V7 657 aa10.23□□□□□ -0.77
CIT-211ENST00000541841 POU4F2Q12837 409 aa10.22□□□□□ -0.77
CIT-211ENST00000541841 RNFT1Q5M7Z0 435 aa10.22□□□□□ -0.77
CIT-211ENST00000541841 RNF135Q8IUD6 432 aa10.22□□□□□ -0.77
CIT-211ENST00000541841 PHTF2Q8N3S3 785 aa10.22□□□□□ -0.77
CIT-211ENST00000541841 NLRP3Q96P20 1036 aa10.22□□□□□ -0.77
CIT-211ENST00000541841 SLFNL1Q499Z3 407 aa10.21□□□□□ -0.77
CIT-211ENST00000541841 OXLD1Q5BKU9 147 aa10.21□□□□□ -0.77
CIT-211ENST00000541841 SLC27A3Q5K4L6 730 aa10.21□□□□□ -0.77
CIT-211ENST00000541841 CCDC125Q86Z20 511 aa10.21□□□□□ -0.77
CIT-211ENST00000541841 COL25A1Q9BXS0 654 aaPredicted RBP10.21□□□□□ -0.77
CIT-211ENST00000541841 DOLKQ9UPQ8 538 aa10.21□□□□□ -0.77
CIT-211ENST00000541841 IL2RAP01589 272 aa10.2□□□□□ -0.78
CIT-211ENST00000541841 CLN3Q13286 438 aa10.2□□□□□ -0.78
CIT-211ENST00000541841 NANOS1Q8WY41 292 aaKnown RBP10.19□□□□□ -0.78
CIT-211ENST00000541841 TRIM52Q96A61 297 aa10.19□□□□□ -0.78
CIT-211ENST00000541841 MYCP01106 439 aaPredicted RBP10.18□□□□□ -0.78
CIT-211ENST00000541841 PIK3CDO00329 1044 aa10.17□□□□□ -0.78
CIT-211ENST00000541841 GPC1P35052 558 aa10.17□□□□□ -0.78
CIT-211ENST00000541841 SV2AQ7L0J3 742 aa10.17□□□□□ -0.78
CIT-211ENST00000541841 CNKSR1Q969H4 720 aa10.17□□□□□ -0.78
CIT-211ENST00000541841 GRIP2Q9C0E4 1043 aa10.17□□□□□ -0.78
CIT-211ENST00000541841 SEMA3FQ13275 785 aa10.16□□□□□ -0.78
CIT-211ENST00000541841 WASHC4Q2M389 1173 aa10.16□□□□□ -0.78
CIT-211ENST00000541841 RIPOR1Q6ZS17 1223 aa10.16□□□□□ -0.78
CIT-211ENST00000541841 GAS2L1Q99501 681 aaPredicted RBP10.16□□□□□ -0.78
CIT-211ENST00000541841 GNRH1P01148 92 aa10.15□□□□□ -0.78
CIT-211ENST00000541841 NBPF10Q6P3W6 841 aaKnown RBP10.15□□□□□ -0.78
CIT-211ENST00000541841 NBPF15Q8N660 670 aa10.15□□□□□ -0.78
CIT-211ENST00000541841 GTF3C3Q9Y5Q9 886 aa10.15□□□□□ -0.78
CIT-211ENST00000541841 GPR25O00155 361 aa10.14□□□□□ -0.79
CIT-211ENST00000541841 PHKA2P46019 1235 aa10.14□□□□□ -0.79
CIT-211ENST00000541841 CENPCQ03188 943 aa10.14□□□□□ -0.79
CIT-211ENST00000541841 ESYT1Q9BSJ8 1104 aa10.14□□□□□ -0.79
CIT-211ENST00000541841 PLPP7Q8NBV4 271 aa10.13□□□□□ -0.79
CIT-211ENST00000541841 ETNK1Q9HBU6 452 aa10.13□□□□□ -0.79
CIT-211ENST00000541841 USP4Q13107 963 aa10.12□□□□□ -0.79
CIT-211ENST00000541841 DBN1Q16643 649 aa10.12□□□□□ -0.79
CIT-211ENST00000541841 ZNF837Q96EG3 531 aaPredicted RBP10.12□□□□□ -0.79
CIT-211ENST00000541841 CHIC2Q9UKJ5 165 aa10.12□□□□□ -0.79
CIT-211ENST00000541841 HRH3Q9Y5N1 445 aa10.12□□□□□ -0.79
CIT-211ENST00000541841 FAM181BA6NEQ2 426 aa10.11□□□□□ -0.79
CIT-211ENST00000541841 POM121CA8CG34 1229 aa10.11□□□□□ -0.79
CIT-211ENST00000541841 WASLO00401 505 aaPredicted RBP10.11□□□□□ -0.79
CIT-211ENST00000541841 GAS6Q14393 721 aa10.11□□□□□ -0.79
CIT-211ENST00000541841 TAS1R3Q7RTX0 852 aa10.11□□□□□ -0.79
CIT-211ENST00000541841 WHAMMQ8TF30 809 aa10.11□□□□□ -0.79
CIT-211ENST00000541841 XAGE2Q96GT9 111 aa10.11□□□□□ -0.79
CIT-211ENST00000541841 SPATA31C2B4DYI2 1134 aa10.1□□□□□ -0.79
CIT-211ENST00000541841 ZSCAN10Q96SZ4 725 aaPredicted RBP10.1□□□□□ -0.79
CIT-211ENST00000541841 FHDC1Q9C0D6 1143 aaPredicted RBP10.1□□□□□ -0.79
CIT-211ENST00000541841 TIMMDC1Q9NPL8 285 aa10.1□□□□□ -0.79
CIT-211ENST00000541841 DYRK1BQ9Y463 629 aa10.1□□□□□ -0.79
CIT-211ENST00000541841 UBTFP17480 764 aaKnown RBP10.09□□□□□ -0.79
CIT-211ENST00000541841 GTPBP3Q969Y2 492 aaKnown RBP10.09□□□□□ -0.79
CIT-211ENST00000541841 GPAMQ9HCL2 828 aa10.09□□□□□ -0.79
CIT-211ENST00000541841 SCNN1DP51172 638 aa10.08□□□□□ -0.8
CIT-211ENST00000541841 TRIM22Q8IYM9 498 aa10.08□□□□□ -0.8
CIT-211ENST00000541841 RAD21O60216 631 aa10.07□□□□□ -0.8
CIT-211ENST00000541841 SKIP12755 728 aa10.07□□□□□ -0.8
CIT-211ENST00000541841 TLR1Q15399 786 aa10.07□□□□□ -0.8
CIT-211ENST00000541841 C4orf17Q53FE4 359 aa10.07□□□□□ -0.8
CIT-211ENST00000541841 ESCO1Q5FWF5 840 aa10.07□□□□□ -0.8
CIT-211ENST00000541841 ZNF385CQ66K41 422 aaPredicted RBP10.07□□□□□ -0.8
CIT-211ENST00000541841 TMEM214Q6NUQ4 689 aaKnown RBP10.07□□□□□ -0.8
CIT-211ENST00000541841 ADAMTS19Q8TE59 1207 aa10.07□□□□□ -0.8
CIT-211ENST00000541841 ALG2Q9H553 416 aa10.07□□□□□ -0.8
CIT-211ENST00000541841 THBS1P07996 1170 aa10.06□□□□□ -0.8
CIT-211ENST00000541841 SOX11P35716 441 aa10.06□□□□□ -0.8
CIT-211ENST00000541841 GDF10P55107 478 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms