RNA–Protein interactions for RNA: ENST00000541699.1

PGA3-206, Transcript of pepsinogen 3, group I (pepsinogen A), humanhuman

TSL 2

Gene PGA3, Length 925 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGA3-206ENST00000541699 MEGF6O75095 1541 aa17.37■□□□□ 0.37
PGA3-206ENST00000541699 RBM6P78332 1123 aaKnown RBP17.36■□□□□ 0.37
PGA3-206ENST00000541699 AMOTQ4VCS5 1084 aa17.36■□□□□ 0.37
PGA3-206ENST00000541699 NCBP3Q53F19 620 aaKnown RBP17.35■□□□□ 0.37
PGA3-206ENST00000541699 PLEKHO1Q53GL0 409 aaPredicted RBP17.35■□□□□ 0.37
PGA3-206ENST00000541699 PHF23Q9BUL5 403 aaPredicted RBP17.34■□□□□ 0.37
PGA3-206ENST00000541699 NEFMP07197 916 aa17.33■□□□□ 0.36
PGA3-206ENST00000541699 CCDC146Q8IYE0 955 aa17.33■□□□□ 0.36
PGA3-206ENST00000541699 ZCRB1Q8TBF4 217 aaKnown RBP17.33■□□□□ 0.36
PGA3-206ENST00000541699 SPG7Q9UQ90 795 aa17.33■□□□□ 0.36
PGA3-206ENST00000541699 PARP4Q9UKK3 1724 aaKnown RBP17.33■□□□□ 0.36
PGA3-206ENST00000541699 MAPK8IP3Q9UPT6 1336 aa17.32■□□□□ 0.36
PGA3-206ENST00000541699 FAM98CQ17RN3 349 aaKnown RBP17.32■□□□□ 0.36
PGA3-206ENST00000541699 MTHFSDQ2M296 383 aaKnown RBP17.32■□□□□ 0.36
PGA3-206ENST00000541699 POTEAQ6S8J7 498 aa17.32■□□□□ 0.36
PGA3-206ENST00000541699 WNK3Q9BYP7 1800 aa17.32■□□□□ 0.36
PGA3-206ENST00000541699 THSD7AQ9UPZ6 1657 aa17.32■□□□□ 0.36
PGA3-206ENST00000541699 PKD1L3Q7Z443 1732 aa17.31■□□□□ 0.36
PGA3-206ENST00000541699 EXOC5O00471 708 aa17.31■□□□□ 0.36
PGA3-206ENST00000541699 APAF1O14727 1248 aa17.31■□□□□ 0.36
PGA3-206ENST00000541699 RXRBP28702 533 aa17.31■□□□□ 0.36
PGA3-206ENST00000541699 NGEFQ8N5V2 710 aa17.31■□□□□ 0.36
PGA3-206ENST00000541699 GAS2L2Q8NHY3 880 aa17.31■□□□□ 0.36
PGA3-206ENST00000541699 TMPOP42166 694 aaKnown RBP17.3■□□□□ 0.36
PGA3-206ENST00000541699 NFE2L2Q16236 605 aa17.3■□□□□ 0.36
PGA3-206ENST00000541699 DDB1Q16531 1140 aa17.29■□□□□ 0.36
PGA3-206ENST00000541699 CYP27B1O15528 508 aa17.28■□□□□ 0.36
PGA3-206ENST00000541699 HTATSF1O43719 755 aaKnown RBP17.28■□□□□ 0.36
PGA3-206ENST00000541699 NKX1-1Q15270 411 aaPredicted RBP17.28■□□□□ 0.36
PGA3-206ENST00000541699 SEPT12Q8IYM1 358 aa17.28■□□□□ 0.36
PGA3-206ENST00000541699 TNS2Q63HR2 1409 aa17.28■□□□□ 0.36
PGA3-206ENST00000541699 PCDH11XQ9BZA7 1347 aa17.27■□□□□ 0.36
PGA3-206ENST00000541699 PCDH11YQ9BZA8 1340 aa17.27■□□□□ 0.36
PGA3-206ENST00000541699 PHKG2P15735 406 aa17.27■□□□□ 0.36
PGA3-206ENST00000541699 CCDC27Q2M243 656 aa17.27■□□□□ 0.36
PGA3-206ENST00000541699 AKAP4Q5JQC9 854 aa17.27■□□□□ 0.36
PGA3-206ENST00000541699 ZNF530Q6P9A1 599 aaPredicted RBP17.27■□□□□ 0.36
PGA3-206ENST00000541699 IFNL2Q8IZJ0 200 aa17.27■□□□□ 0.36
PGA3-206ENST00000541699 LRRC37A3O60309 1634 aa17.26■□□□□ 0.35
PGA3-206ENST00000541699 SHANK3Q9BYB0 1731 aa17.25■□□□□ 0.35
PGA3-206ENST00000541699 GNAT3A8MTJ3 354 aa17.25■□□□□ 0.35
PGA3-206ENST00000541699 HSP90AB1P08238 724 aaKnown RBP17.25■□□□□ 0.35
PGA3-206ENST00000541699 RIPK4P57078 832 aa17.25■□□□□ 0.35
PGA3-206ENST00000541699 C1orf141Q5JVX7 400 aa17.24■□□□□ 0.35
PGA3-206ENST00000541699 MARCH10Q8NA82 808 aaPredicted RBP17.24■□□□□ 0.35
PGA3-206ENST00000541699 TRIM35Q9UPQ4 493 aa17.24■□□□□ 0.35
PGA3-206ENST00000541699 MAP3K5Q99683 1374 aa17.24■□□□□ 0.35
PGA3-206ENST00000541699 LMOD3Q0VAK6 560 aa17.23■□□□□ 0.35
PGA3-206ENST00000541699 PDE3BQ13370 1112 aa17.23■□□□□ 0.35
PGA3-206ENST00000541699 DDX54Q8TDD1 881 aaKnown RBP17.23■□□□□ 0.35
PGA3-206ENST00000541699 RRP7AQ9Y3A4 280 aaKnown RBP17.23■□□□□ 0.35
PGA3-206ENST00000541699 BCL9O00512 1426 aa17.22■□□□□ 0.35
PGA3-206ENST00000541699 DCAF5Q96JK2 942 aa17.22■□□□□ 0.35
PGA3-206ENST00000541699 ADAMTS7Q9UKP4 1686 aa17.21■□□□□ 0.35
PGA3-206ENST00000541699 CEMIPQ8WUJ3 1361 aa17.21■□□□□ 0.35
PGA3-206ENST00000541699 NEUROD2Q15784 382 aa17.21■□□□□ 0.35
PGA3-206ENST00000541699 IL17REQ8NFR9 667 aa17.21■□□□□ 0.35
PGA3-206ENST00000541699 RGS12O14924 1447 aa17.21■□□□□ 0.34
PGA3-206ENST00000541699 ZNF521Q96K83 1311 aa17.21■□□□□ 0.34
PGA3-206ENST00000541699 DLG5Q8TDM6 1919 aa17.2■□□□□ 0.34
PGA3-206ENST00000541699 A0A0G2JS52 829 aa17.2■□□□□ 0.34
PGA3-206ENST00000541699 MYT1Q01538 1121 aa17.2■□□□□ 0.34
PGA3-206ENST00000541699 WWC1Q8IX03 1113 aa17.2■□□□□ 0.34
PGA3-206ENST00000541699 RNMTO43148 476 aaKnown RBP17.19■□□□□ 0.34
PGA3-206ENST00000541699 HNRNPUQ00839 825 aaKnown RBP eCLIP17.19■□□□□ 0.34
PGA3-206ENST00000541699 MPRIPQ6WCQ1 1025 aa17.19■□□□□ 0.34
PGA3-206ENST00000541699 KRT27Q7Z3Y8 459 aa17.19■□□□□ 0.34
PGA3-206ENST00000541699 RTF1Q92541 710 aaKnown RBP17.19■□□□□ 0.34
PGA3-206ENST00000541699 LGR6Q9HBX8 967 aa17.19■□□□□ 0.34
PGA3-206ENST00000541699 KDM6AO15550 1401 aaPredicted RBP17.19■□□□□ 0.34
PGA3-206ENST00000541699 ERVV-2B6SEH9 535 aa17.18■□□□□ 0.34
PGA3-206ENST00000541699 WDR63Q8IWG1 891 aa17.18■□□□□ 0.34
PGA3-206ENST00000541699 BRWD3Q6RI45 1802 aa17.17■□□□□ 0.34
PGA3-206ENST00000541699 SCN11AQ9UI33 1791 aa17.16■□□□□ 0.34
PGA3-206ENST00000541699 CALD1Q05682 793 aaKnown RBP17.16■□□□□ 0.34
PGA3-206ENST00000541699 MCM10Q7L590 875 aa17.16■□□□□ 0.34
PGA3-206ENST00000541699 IL16Q14005 1332 aa17.16■□□□□ 0.34
PGA3-206ENST00000541699 ZBED9Q6R2W3 1325 aa17.16■□□□□ 0.34
PGA3-206ENST00000541699 DCTN1Q14203 1278 aa17.15■□□□□ 0.34
PGA3-206ENST00000541699 FAM196AQ6ZSG2 479 aa17.15■□□□□ 0.34
PGA3-206ENST00000541699 MRC1P22897 1456 aa17.14■□□□□ 0.33
PGA3-206ENST00000541699 SENP3-EIF4A1A0A087X0R7 540 aa17.14■□□□□ 0.33
PGA3-206ENST00000541699 SLC52A2Q9HAB3 445 aa17.14■□□□□ 0.33
PGA3-206ENST00000541699 BABAM1Q9NWV8 329 aa17.14■□□□□ 0.33
PGA3-206ENST00000541699 SALL2Q9Y467 1007 aaPredicted RBP17.14■□□□□ 0.33
PGA3-206ENST00000541699 ZNF853P0CG23 659 aa17.13■□□□□ 0.33
PGA3-206ENST00000541699 TAF7Q15545 349 aaPredicted RBP17.13■□□□□ 0.33
PGA3-206ENST00000541699 THUMPD2Q9BTF0 503 aaKnown RBP17.13■□□□□ 0.33
PGA3-206ENST00000541699 CABP4P57796 275 aa17.12■□□□□ 0.33
PGA3-206ENST00000541699 NFATC2IPQ8NCF5 419 aa17.12■□□□□ 0.33
PGA3-206ENST00000541699 TOGARAM1Q9Y4F4 1720 aa17.11■□□□□ 0.33
PGA3-206ENST00000541699 CHL1O00533 1208 aa17.11■□□□□ 0.33
PGA3-206ENST00000541699 TEFQ10587 303 aa17.11■□□□□ 0.33
PGA3-206ENST00000541699 CFAP44Q96MT7 982 aa17.11■□□□□ 0.33
PGA3-206ENST00000541699 IFT57Q9NWB7 429 aa17.11■□□□□ 0.33
PGA3-206ENST00000541699 VIRMAQ69YN4 1812 aaKnown RBP17.1■□□□□ 0.33
PGA3-206ENST00000541699 PRIM1P49642 420 aaKnown RBP17.1■□□□□ 0.33
PGA3-206ENST00000541699 GNAI1P63096 354 aa17.1■□□□□ 0.33
PGA3-206ENST00000541699 GOLGA2Q08379 1002 aa17.1■□□□□ 0.33
PGA3-206ENST00000541699 FAM182BQ5T319 152 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms