RNA–Protein interactions for RNA: ENST00000541280.1

SUDS3-202, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-202ENST00000541280 ZNF330Q9Y3S2 320 aaPredicted RBP10.21□□□□□ -0.77
SUDS3-202ENST00000541280 CFTRP13569 1480 aa10.21□□□□□ -0.78
SUDS3-202ENST00000541280 RAB15P59190 212 aa10.2□□□□□ -0.78
SUDS3-202ENST00000541280 INSM1Q01101 510 aaPredicted RBP10.2□□□□□ -0.78
SUDS3-202ENST00000541280 ERBB4Q15303 1308 aa10.2□□□□□ -0.78
SUDS3-202ENST00000541280 AGBL1Q96MI9 1066 aa10.2□□□□□ -0.78
SUDS3-202ENST00000541280 RNF20Q5VTR2 975 aa10.19□□□□□ -0.78
SUDS3-202ENST00000541280 GMPRP36959 345 aa10.18□□□□□ -0.78
SUDS3-202ENST00000541280 RELBQ01201 579 aa10.18□□□□□ -0.78
SUDS3-202ENST00000541280 PPFIA3O75145 1194 aa10.17□□□□□ -0.78
SUDS3-202ENST00000541280 PTGIRP43119 386 aa10.17□□□□□ -0.78
SUDS3-202ENST00000541280 CTSOP43234 321 aaPredicted RBP10.17□□□□□ -0.78
SUDS3-202ENST00000541280 ERVK-9P63128 1117 aa10.17□□□□□ -0.78
SUDS3-202ENST00000541280 INSM2Q96T92 566 aaPredicted RBP10.16□□□□□ -0.78
SUDS3-202ENST00000541280 PRM3Q9NNZ6 103 aa10.16□□□□□ -0.78
SUDS3-202ENST00000541280 CYLDQ9NQC7 956 aa10.16□□□□□ -0.78
SUDS3-202ENST00000541280 TBC1D2BQ9UPU7 963 aa10.16□□□□□ -0.78
SUDS3-202ENST00000541280 RNF217Q8TC41 542 aa10.15□□□□□ -0.78
SUDS3-202ENST00000541280 CCDC88BA6NC98 1476 aa10.15□□□□□ -0.78
SUDS3-202ENST00000541280 FANCD2Q9BXW9 1451 aa10.15□□□□□ -0.78
SUDS3-202ENST00000541280 PTSQ03393 145 aa10.14□□□□□ -0.79
SUDS3-202ENST00000541280 IRF5Q13568 498 aa10.14□□□□□ -0.79
SUDS3-202ENST00000541280 ZNF395Q9H8N7 513 aaPredicted RBP10.14□□□□□ -0.79
SUDS3-202ENST00000541280 STK17AQ9UEE5 414 aa10.14□□□□□ -0.79
SUDS3-202ENST00000541280 MRC2Q9UBG0 1479 aa10.14□□□□□ -0.79
SUDS3-202ENST00000541280 CEP164Q9UPV0 1460 aa10.13□□□□□ -0.79
SUDS3-202ENST00000541280 SLC35F4A4IF30 521 aa10.13□□□□□ -0.79
SUDS3-202ENST00000541280 FIGNL2A6NMB9 653 aa10.13□□□□□ -0.79
SUDS3-202ENST00000541280 FOXD4L5Q5VV16 416 aaPredicted RBP10.13□□□□□ -0.79
SUDS3-202ENST00000541280 CC2D2BQ6DHV5 1058 aa10.13□□□□□ -0.79
SUDS3-202ENST00000541280 POLMQ9NP87 494 aaPredicted RBP10.13□□□□□ -0.79
SUDS3-202ENST00000541280 LORP23490 312 aaPredicted RBP10.12□□□□□ -0.79
SUDS3-202ENST00000541280 ATP5J2-PTCD1G3V325 749 aa10.11□□□□□ -0.79
SUDS3-202ENST00000541280 MCM6Q14566 821 aa10.11□□□□□ -0.79
SUDS3-202ENST00000541280 CEP126Q9P2H0 1117 aa10.11□□□□□ -0.79
SUDS3-202ENST00000541280 TRAK2O60296 914 aa10.1□□□□□ -0.79
SUDS3-202ENST00000541280 RNF144AP50876 292 aaPredicted RBP10.1□□□□□ -0.79
SUDS3-202ENST00000541280 CCDC155Q8N6L0 562 aa10.1□□□□□ -0.79
SUDS3-202ENST00000541280 NANOS1Q8WY41 292 aaKnown RBP10.1□□□□□ -0.79
SUDS3-202ENST00000541280 GPC1P35052 558 aa10.09□□□□□ -0.79
SUDS3-202ENST00000541280 SCTRP47872 440 aa10.09□□□□□ -0.79
SUDS3-202ENST00000541280 EIF4G2P78344 907 aaKnown RBP eCLIP10.09□□□□□ -0.79
SUDS3-202ENST00000541280 PCDHB11Q9Y5F2 797 aa10.09□□□□□ -0.79
SUDS3-202ENST00000541280 SENP3-EIF4A1A0A087X0R7 540 aa10.08□□□□□ -0.8
SUDS3-202ENST00000541280 SUPT5HO00267 1087 aaKnown RBP10.08□□□□□ -0.8
SUDS3-202ENST00000541280 CYP2U1Q7Z449 544 aa10.08□□□□□ -0.8
SUDS3-202ENST00000541280 OSBPL3Q9H4L5 887 aa10.08□□□□□ -0.8
SUDS3-202ENST00000541280 PHTF2Q8N3S3 785 aa10.07□□□□□ -0.8
SUDS3-202ENST00000541280 GDPD2Q9HCC8 539 aa10.07□□□□□ -0.8
SUDS3-202ENST00000541280 WDR62O43379 1518 aa10.07□□□□□ -0.8
SUDS3-202ENST00000541280 THOC2Q8NI27 1593 aaKnown RBP10.06□□□□□ -0.8
SUDS3-202ENST00000541280 LYSMD3Q7Z3D4 306 aa10.06□□□□□ -0.8
SUDS3-202ENST00000541280 CCDC85AQ96PX6 553 aaPredicted RBP10.06□□□□□ -0.8
SUDS3-202ENST00000541280 A0A1W2PRU2 124 aa10.05□□□□□ -0.8
SUDS3-202ENST00000541280 ITGA6P23229 1130 aa10.05□□□□□ -0.8
SUDS3-202ENST00000541280 WASHC4Q2M389 1173 aa10.05□□□□□ -0.8
SUDS3-202ENST00000541280 ZSCAN1Q8NBB4 408 aa10.05□□□□□ -0.8
SUDS3-202ENST00000541280 CHIC2Q9UKJ5 165 aa10.05□□□□□ -0.8
SUDS3-202ENST00000541280 ABCC8Q09428 1581 aa10.05□□□□□ -0.8
SUDS3-202ENST00000541280 CLN3Q13286 438 aa10.04□□□□□ -0.8
SUDS3-202ENST00000541280 GNRH1P01148 92 aa10.02□□□□□ -0.81
SUDS3-202ENST00000541280 ABL2P42684 1182 aa10.02□□□□□ -0.81
SUDS3-202ENST00000541280 VAC14Q08AM6 782 aa10.02□□□□□ -0.81
SUDS3-202ENST00000541280 GPR161Q8N6U8 529 aaKnown RBP10.02□□□□□ -0.81
SUDS3-202ENST00000541280 SOX11P35716 441 aa10.01□□□□□ -0.81
SUDS3-202ENST00000541280 CDCA7Q9BWT1 371 aaPredicted RBP10.01□□□□□ -0.81
SUDS3-202ENST00000541280 GRIP2Q9C0E4 1043 aa10.01□□□□□ -0.81
SUDS3-202ENST00000541280 COG6Q9Y2V7 657 aa10.01□□□□□ -0.81
SUDS3-202ENST00000541280 FAM181BA6NEQ2 426 aa10□□□□□ -0.81
SUDS3-202ENST00000541280 MEN1O00255 615 aa10□□□□□ -0.81
SUDS3-202ENST00000541280 MYCP01106 439 aaPredicted RBP10□□□□□ -0.81
SUDS3-202ENST00000541280 KRT76Q01546 638 aa10□□□□□ -0.81
SUDS3-202ENST00000541280 URB2Q14146 1524 aaKnown RBP9.99□□□□□ -0.81
SUDS3-202ENST00000541280 SPATA31C2B4DYI2 1134 aa9.99□□□□□ -0.81
SUDS3-202ENST00000541280 PRICKLE2Q7Z3G6 844 aa9.99□□□□□ -0.81
SUDS3-202ENST00000541280 NLRP3Q96P20 1036 aa9.99□□□□□ -0.81
SUDS3-202ENST00000541280 ESF1Q9H501 851 aaKnown RBP9.99□□□□□ -0.81
SUDS3-202ENST00000541280 ARHGEF10LQ9HCE6 1279 aa9.99□□□□□ -0.81
SUDS3-202ENST00000541280 HRH3Q9Y5N1 445 aa9.99□□□□□ -0.81
SUDS3-202ENST00000541280 KIF21AQ7Z4S6 1674 aa9.99□□□□□ -0.81
SUDS3-202ENST00000541280 SLFNL1Q499Z3 407 aa9.98□□□□□ -0.81
SUDS3-202ENST00000541280 WDR44Q5JSH3 913 aa9.98□□□□□ -0.81
SUDS3-202ENST00000541280 SV2AQ7L0J3 742 aa9.98□□□□□ -0.81
SUDS3-202ENST00000541280 RNF135Q8IUD6 432 aa9.98□□□□□ -0.81
SUDS3-202ENST00000541280 DOLKQ9UPQ8 538 aa9.98□□□□□ -0.81
SUDS3-202ENST00000541280 IL2RAP01589 272 aa9.97□□□□□ -0.81
SUDS3-202ENST00000541280 TSGA10IPQ3SY00 556 aa9.97□□□□□ -0.81
SUDS3-202ENST00000541280 GMCL1Q96IK5 515 aa9.97□□□□□ -0.81
SUDS3-202ENST00000541280 ESYT1Q9BSJ8 1104 aa9.97□□□□□ -0.81
SUDS3-202ENST00000541280 IFT140Q96RY7 1462 aa9.97□□□□□ -0.81
SUDS3-202ENST00000541280 FLIIQ13045 1269 aa9.96□□□□□ -0.82
SUDS3-202ENST00000541280 USP4Q13107 963 aa9.96□□□□□ -0.82
SUDS3-202ENST00000541280 MAP7D1Q3KQU3 841 aa9.96□□□□□ -0.82
SUDS3-202ENST00000541280 VWA5B2Q8N398 1253 aa9.96□□□□□ -0.82
SUDS3-202ENST00000541280 XAGE2Q96GT9 111 aa9.96□□□□□ -0.82
SUDS3-202ENST00000541280 COL25A1Q9BXS0 654 aaPredicted RBP9.96□□□□□ -0.82
SUDS3-202ENST00000541280 RHOQP17081 205 aa9.95□□□□□ -0.82
SUDS3-202ENST00000541280 SLC27A3Q5K4L6 730 aa9.95□□□□□ -0.82
SUDS3-202ENST00000541280 DYRK1BQ9Y463 629 aa9.95□□□□□ -0.82
SUDS3-202ENST00000541280 TOPBP1Q92547 1522 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms