RNA–Protein interactions for RNA: ENST00000541272.1

UBC-209, Transcript of ubiquitin C, humanhuman

TSL 5

Gene UBC, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-209ENST00000541272 USP47Q96K76 1375 aa16.65■□□□□ 0.26
UBC-209ENST00000541272 RTL1A6NKG5 1358 aa16.64■□□□□ 0.26
UBC-209ENST00000541272 CCNL1Q9UK58 526 aaPredicted RBP16.64■□□□□ 0.25
UBC-209ENST00000541272 NLGN2Q8NFZ4 835 aa16.63■□□□□ 0.25
UBC-209ENST00000541272 COL23A1Q86Y22 540 aaPredicted RBP16.62■□□□□ 0.25
UBC-209ENST00000541272 TMC1Q8TDI8 760 aa16.62■□□□□ 0.25
UBC-209ENST00000541272 COG3Q96JB2 828 aa16.62■□□□□ 0.25
UBC-209ENST00000541272 SLC12A5Q9H2X9 1139 aa16.62■□□□□ 0.25
UBC-209ENST00000541272 A0A1W2PP64 1363 aa16.62■□□□□ 0.25
UBC-209ENST00000541272 KIF24Q5T7B8 1368 aa16.62■□□□□ 0.25
UBC-209ENST00000541272 NSD3Q9BZ95 1437 aa16.62■□□□□ 0.25
UBC-209ENST00000541272 YBX3P16989 372 aaKnown RBP eCLIP16.61■□□□□ 0.252e-13■□□□□ 10.8
UBC-209ENST00000541272 HOXC9P31274 260 aa16.61■□□□□ 0.25
UBC-209ENST00000541272 PELP1Q8IZL8 1130 aaKnown RBP16.61■□□□□ 0.25
UBC-209ENST00000541272 KLHL34Q8N239 644 aa16.61■□□□□ 0.25
UBC-209ENST00000541272 SYTL4Q96C24 671 aaPredicted RBP16.61■□□□□ 0.25
UBC-209ENST00000541272 CARD11Q9BXL7 1154 aa16.61■□□□□ 0.25
UBC-209ENST00000541272 GPBP1L1Q9HC44 474 aaPredicted RBP16.61■□□□□ 0.25
UBC-209ENST00000541272 ADCY9O60503 1353 aa16.61■□□□□ 0.25
UBC-209ENST00000541272 KAT6BQ8WYB5 2073 aa16.6■□□□□ 0.25
UBC-209ENST00000541272 HSPA6P17066 643 aa16.6■□□□□ 0.25
UBC-209ENST00000541272 TUBGCP6Q96RT7 1819 aa16.6■□□□□ 0.25
UBC-209ENST00000541272 CEP350Q5VT06 3117 aa16.59■□□□□ 0.25
UBC-209ENST00000541272 AMPHP49418 695 aa16.59■□□□□ 0.25
UBC-209ENST00000541272 MAP3K19Q56UN5 1328 aa16.59■□□□□ 0.25
UBC-209ENST00000541272 ATP10DQ9P241 1426 aa16.59■□□□□ 0.25
UBC-209ENST00000541272 DOT1LQ8TEK3 1739 aa16.59■□□□□ 0.25
UBC-209ENST00000541272 SMARCC1Q92922 1105 aaPredicted RBP16.58■□□□□ 0.24
UBC-209ENST00000541272 SMG6Q86US8 1419 aaKnown RBP16.57■□□□□ 0.24
UBC-209ENST00000541272 RAPGEF4Q8WZA2 1011 aa16.57■□□□□ 0.24
UBC-209ENST00000541272 PCDH11XQ9BZA7 1347 aa16.56■□□□□ 0.24
UBC-209ENST00000541272 PCDH11YQ9BZA8 1340 aa16.56■□□□□ 0.24
UBC-209ENST00000541272 MSH5O43196 834 aa16.55■□□□□ 0.24
UBC-209ENST00000541272 MEGF6O75095 1541 aa16.55■□□□□ 0.24
UBC-209ENST00000541272 C5P01031 1676 aa16.54■□□□□ 0.24
UBC-209ENST00000541272 TATP17735 454 aaPredicted RBP16.54■□□□□ 0.24
UBC-209ENST00000541272 LTV1Q96GA3 475 aaPredicted RBP16.54■□□□□ 0.24
UBC-209ENST00000541272 SIN3AQ96ST3 1273 aa16.54■□□□□ 0.24
UBC-209ENST00000541272 PLEKHG2Q9H7P9 1386 aa16.53■□□□□ 0.24
UBC-209ENST00000541272 SSFA2P28290 1259 aa16.53■□□□□ 0.24
UBC-209ENST00000541272 INSRP06213 1382 aa16.52■□□□□ 0.24
UBC-209ENST00000541272 KCNQ4P56696 695 aa16.52■□□□□ 0.24
UBC-209ENST00000541272 NBPF6Q5VWK0 638 aa16.52■□□□□ 0.24
UBC-209ENST00000541272 NBPF4Q96M43 638 aa16.52■□□□□ 0.24
UBC-209ENST00000541272 PALLDQ8WX93 1383 aa16.51■□□□□ 0.23
UBC-209ENST00000541272 NKX1-1Q15270 411 aaPredicted RBP16.51■□□□□ 0.23
UBC-209ENST00000541272 NEUROD1Q13562 356 aa16.5■□□□□ 0.23
UBC-209ENST00000541272 TESK2Q96S53 571 aa16.5■□□□□ 0.23
UBC-209ENST00000541272 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.5■□□□□ 0.23
UBC-209ENST00000541272 TAF1LQ8IZX4 1826 aa16.49■□□□□ 0.23
UBC-209ENST00000541272 APLP1P51693 650 aa16.49■□□□□ 0.23
UBC-209ENST00000541272 AK7Q96M32 723 aa16.49■□□□□ 0.23
UBC-209ENST00000541272 CICQ96RK0 1608 aaPredicted RBP16.48■□□□□ 0.23
UBC-209ENST00000541272 FYB1O15117 783 aa16.48■□□□□ 0.23
UBC-209ENST00000541272 FLT4P35916 1363 aa16.48■□□□□ 0.23
UBC-209ENST00000541272 C4BP0C0L5 1744 aa16.48■□□□□ 0.23
UBC-209ENST00000541272 TGFB2P61812 414 aa16.47■□□□□ 0.23
UBC-209ENST00000541272 IGSF1Q8N6C5 1336 aa16.46■□□□□ 0.23
UBC-209ENST00000541272 NCAPD2Q15021 1401 aa16.46■□□□□ 0.23
UBC-209ENST00000541272 KIF3CO14782 793 aa16.46■□□□□ 0.23
UBC-209ENST00000541272 CDCA8Q53HL2 280 aa16.46■□□□□ 0.23
UBC-209ENST00000541272 MSL1Q68DK7 614 aa16.46■□□□□ 0.23
UBC-209ENST00000541272 MPRIPQ6WCQ1 1025 aa16.46■□□□□ 0.23
UBC-209ENST00000541272 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.45■□□□□ 0.22
UBC-209ENST00000541272 TOMM70O94826 608 aa16.45■□□□□ 0.22
UBC-209ENST00000541272 SPG7Q9UQ90 795 aa16.45■□□□□ 0.22
UBC-209ENST00000541272 RGPD2P0DJD1 1756 aa16.44■□□□□ 0.22
UBC-209ENST00000541272 CYP27B1O15528 508 aa16.44■□□□□ 0.22
UBC-209ENST00000541272 LOC102724428A0A0B4J2F2 783 aa16.43■□□□□ 0.22
UBC-209ENST00000541272 SIK1P57059 783 aa16.43■□□□□ 0.22
UBC-209ENST00000541272 UBR3Q6ZT12 1888 aa16.43■□□□□ 0.22
UBC-209ENST00000541272 PKD1L3Q7Z443 1732 aa16.42■□□□□ 0.22
UBC-209ENST00000541272 TONSLQ96HA7 1378 aa16.42■□□□□ 0.22
UBC-209ENST00000541272 ST20-MTHFSA0A0A6YYL1 179 aa16.42■□□□□ 0.22
UBC-209ENST00000541272 ADRA2BP18089 450 aa16.42■□□□□ 0.22
UBC-209ENST00000541272 TMF1P82094 1093 aa16.42■□□□□ 0.22
UBC-209ENST00000541272 RRS1Q15050 365 aaKnown RBP16.42■□□□□ 0.22
UBC-209ENST00000541272 NLGN1Q8N2Q7 840 aa16.42■□□□□ 0.22
UBC-209ENST00000541272 PIGBQ92521 554 aa16.42■□□□□ 0.22
UBC-209ENST00000541272 HSP90AB2PQ58FF8 381 aa16.41■□□□□ 0.22
UBC-209ENST00000541272 MAP2P11137 1827 aaKnown RBP16.4■□□□□ 0.22
UBC-209ENST00000541272 ZNF831Q5JPB2 1677 aa16.4■□□□□ 0.22
UBC-209ENST00000541272 DNAJC5GQ8N7S2 189 aa16.4■□□□□ 0.22
UBC-209ENST00000541272 KIF13BQ9NQT8 1826 aa16.4■□□□□ 0.22
UBC-209ENST00000541272 TOGARAM1Q9Y4F4 1720 aa16.39■□□□□ 0.21
UBC-209ENST00000541272 FBLN1P23142 703 aa16.39■□□□□ 0.21
UBC-209ENST00000541272 RC3H1Q5TC82 1133 aaKnown RBP16.39■□□□□ 0.21
UBC-209ENST00000541272 ITGB4P16144 1822 aa16.39■□□□□ 0.21
UBC-209ENST00000541272 IFNL2Q8IZJ0 200 aa16.38■□□□□ 0.21
UBC-209ENST00000541272 USHBP1Q8N6Y0 703 aa16.38■□□□□ 0.21
UBC-209ENST00000541272 RBM46Q8TBY0 533 aaKnown RBP16.38■□□□□ 0.21
UBC-209ENST00000541272 GGNBP2Q9H3C7 697 aa16.38■□□□□ 0.21
UBC-209ENST00000541272 TMOD3Q9NYL9 352 aa16.38■□□□□ 0.21
UBC-209ENST00000541272 WASHC2AQ641Q2 1341 aa16.38■□□□□ 0.21
UBC-209ENST00000541272 FSTL1Q12841 308 aa16.37■□□□□ 0.21
UBC-209ENST00000541272 ZNF526Q8TF50 670 aaPredicted RBP16.37■□□□□ 0.21
UBC-209ENST00000541272 TRAPPC3LQ5T215 181 aa16.36■□□□□ 0.21
UBC-209ENST00000541272 AMIGO3Q86WK7 504 aa16.36■□□□□ 0.21
UBC-209ENST00000541272 LINC00116Q8NCU8 138 aa16.36■□□□□ 0.21
UBC-209ENST00000541272 RTCBQ9Y3I0 505 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms